RNA–Protein interactions for RNA: ENST00000513153.5

LINC01088-210, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 3

Gene LINC01088, Length 695 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-210	ENST00000513153	ZNF782	Q6ZMW2	699 aa	Predicted RBP	4.89	□□□□□ -1.63
LINC01088-210	ENST00000513153	RASAL3	Q86YV0	1011 aa		4.89	□□□□□ -1.63
LINC01088-210	ENST00000513153	PRPF38A	Q8NAV1	312 aa	Known RBP	4.89	□□□□□ -1.63
LINC01088-210	ENST00000513153	SEMA6D	Q8NFY4	1073 aa		4.89	□□□□□ -1.63
LINC01088-210	ENST00000513153	RFK	Q969G6	155 aa		4.89	□□□□□ -1.63
LINC01088-210	ENST00000513153	ALG8	Q9BVK2	526 aa		4.89	□□□□□ -1.63
LINC01088-210	ENST00000513153	TPSD1	Q9BZJ3	242 aa		4.89	□□□□□ -1.63
LINC01088-210	ENST00000513153	GPR35	Q9HC97	309 aa		4.89	□□□□□ -1.63
LINC01088-210	ENST00000513153	ETAA1	Q9NY74	926 aa		4.89	□□□□□ -1.63
LINC01088-210	ENST00000513153	SERGEF	Q9UGK8	458 aa		4.89	□□□□□ -1.63
LINC01088-210	ENST00000513153	TNKS	O95271	1327 aa		4.89	□□□□□ -1.63
LINC01088-210	ENST00000513153	LRRC14B	A6NHZ5	514 aa		4.88	□□□□□ -1.63
LINC01088-210	ENST00000513153	ZNF785	A8K8V0	405 aa		4.88	□□□□□ -1.63
LINC01088-210	ENST00000513153	ALG1L2	C9J202	215 aa		4.88	□□□□□ -1.63
LINC01088-210	ENST00000513153	URI1	O94763	535 aa	Predicted RBP	4.88	□□□□□ -1.63
LINC01088-210	ENST00000513153	TTLL1	O95922	423 aa		4.88	□□□□□ -1.63
LINC01088-210	ENST00000513153	RHO	P08100	348 aa		4.88	□□□□□ -1.63
LINC01088-210	ENST00000513153	NR2F6	P10588	404 aa		4.88	□□□□□ -1.63
LINC01088-210	ENST00000513153	PCSK6	P29122	969 aa		4.88	□□□□□ -1.63
LINC01088-210	ENST00000513153	FXR1	P51114	621 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
LINC01088-210	ENST00000513153	AMPD3	Q01432	767 aa		4.88	□□□□□ -1.63
LINC01088-210	ENST00000513153	EIF2B5	Q13144	721 aa	Known RBP	4.88	□□□□□ -1.63
LINC01088-210	ENST00000513153	LLGL1	Q15334	1064 aa		4.88	□□□□□ -1.63
LINC01088-210	ENST00000513153	THEMIS2	Q5TEJ8	643 aa		4.88	□□□□□ -1.63
LINC01088-210	ENST00000513153	TAF2	Q6P1X5	1199 aa		4.88	□□□□□ -1.63
LINC01088-210	ENST00000513153	ZNF517	Q6ZMY9	492 aa	Predicted RBP	4.88	□□□□□ -1.63
LINC01088-210	ENST00000513153	MIER2	Q8N344	545 aa		4.88	□□□□□ -1.63
LINC01088-210	ENST00000513153	VGLL2	Q8N8G2	317 aa		4.88	□□□□□ -1.63
LINC01088-210	ENST00000513153	PSD4	Q8NDX1	1056 aa		4.88	□□□□□ -1.63
LINC01088-210	ENST00000513153	RGMA	Q96B86	450 aa		4.88	□□□□□ -1.63
LINC01088-210	ENST00000513153	PBK	Q96KB5	322 aa		4.88	□□□□□ -1.63
LINC01088-210	ENST00000513153	ZNF48	Q96MX3	618 aa	Predicted RBP	4.88	□□□□□ -1.63
LINC01088-210	ENST00000513153	WAC	Q9BTA9	647 aa		4.88	□□□□□ -1.63
LINC01088-210	ENST00000513153	CNPPD1	Q9BV87	410 aa		4.88	□□□□□ -1.63
LINC01088-210	ENST00000513153	SIK2	Q9H0K1	926 aa		4.88	□□□□□ -1.63
LINC01088-210	ENST00000513153	SMOC2	Q9H3U7	446 aa		4.88	□□□□□ -1.63
LINC01088-210	ENST00000513153	PCDHA3	Q9Y5H8	950 aa		4.88	□□□□□ -1.63
LINC01088-210	ENST00000513153	WASHC2C	Q9Y4E1	1318 aa		4.88	□□□□□ -1.63
LINC01088-210	ENST00000513153	CADPS	Q9ULU8	1353 aa		4.88	□□□□□ -1.63
LINC01088-210	ENST00000513153	RARB	P10826	455 aa		4.87	□□□□□ -1.63
LINC01088-210	ENST00000513153	DRD4	P21917	467 aa		4.87	□□□□□ -1.63
LINC01088-210	ENST00000513153	TKT	P29401	623 aa	Known RBP	4.87	□□□□□ -1.63
LINC01088-210	ENST00000513153	PRDX5	P30044	214 aa		4.87	□□□□□ -1.63
LINC01088-210	ENST00000513153	PHKA1	P46020	1223 aa		4.87	□□□□□ -1.63
LINC01088-210	ENST00000513153	PIK3CG	P48736	1102 aa		4.87	□□□□□ -1.63
LINC01088-210	ENST00000513153	ZNF135	P52742	658 aa	Predicted RBP	4.87	□□□□□ -1.63
LINC01088-210	ENST00000513153	EVA1C	P58658	441 aa		4.87	□□□□□ -1.63
LINC01088-210	ENST00000513153	TCF15	Q12870	199 aa		4.87	□□□□□ -1.63
LINC01088-210	ENST00000513153	KIF22	Q14807	665 aa		4.87	□□□□□ -1.63
LINC01088-210	ENST00000513153	PLAC9	Q5JTB6	97 aa		4.87	□□□□□ -1.63
LINC01088-210	ENST00000513153	FAM90A1	Q86YD7	464 aa		4.87	□□□□□ -1.63
LINC01088-210	ENST00000513153	FKBP10	Q96AY3	582 aa		4.87	□□□□□ -1.63
LINC01088-210	ENST00000513153	C1orf43	Q9BWL3	253 aa		4.87	□□□□□ -1.63
LINC01088-210	ENST00000513153	ACTRT3	Q9BYD9	372 aa		4.87	□□□□□ -1.63
LINC01088-210	ENST00000513153	SLAMF7	Q9NQ25	335 aa		4.87	□□□□□ -1.63
LINC01088-210	ENST00000513153	SERTAD4	Q9NUC0	356 aa		4.87	□□□□□ -1.63
LINC01088-210	ENST00000513153	EHD3	Q9NZN3	535 aa		4.87	□□□□□ -1.63
LINC01088-210	ENST00000513153	ZNF580	Q9UK33	172 aa		4.87	□□□□□ -1.63
LINC01088-210	ENST00000513153	PADI4	Q9UM07	663 aa		4.87	□□□□□ -1.63
LINC01088-210	ENST00000513153	SPEF1	Q9Y4P9	236 aa		4.87	□□□□□ -1.63
LINC01088-210	ENST00000513153	ZNF521	Q96K83	1311 aa		4.87	□□□□□ -1.63
LINC01088-210	ENST00000513153	SLC16A6	O15403	523 aa		4.86	□□□□□ -1.63
LINC01088-210	ENST00000513153	VPS4B	O75351	444 aa		4.86	□□□□□ -1.63
LINC01088-210	ENST00000513153	ZFX	P17010	805 aa	Predicted RBP	4.86	□□□□□ -1.63
LINC01088-210	ENST00000513153	ITGAL	P20701	1170 aa		4.86	□□□□□ -1.63
LINC01088-210	ENST00000513153	PDC	P20941	246 aa		4.86	□□□□□ -1.63
LINC01088-210	ENST00000513153	CCT8	P50990	548 aa		4.86	□□□□□ -1.63
LINC01088-210	ENST00000513153	CCT4	P50991	539 aa	Known RBP	4.86	□□□□□ -1.63
LINC01088-210	ENST00000513153	SLC10A2	Q12908	348 aa	Predicted RBP	4.86	□□□□□ -1.63
LINC01088-210	ENST00000513153	BMPR2	Q13873	1038 aa		4.86	□□□□□ -1.63
LINC01088-210	ENST00000513153	TBCC	Q15814	346 aa		4.86	□□□□□ -1.63
LINC01088-210	ENST00000513153	CAMKK1	Q8N5S9	505 aa		4.86	□□□□□ -1.63
LINC01088-210	ENST00000513153	DDX17	Q92841	729 aa	Known RBP	4.86	□□□□□ -1.63
LINC01088-210	ENST00000513153	WDCP	Q9H6R7	721 aa		4.86	□□□□□ -1.63
LINC01088-210	ENST00000513153	MRPS18A	Q9NVS2	196 aa	Known RBP	4.86	□□□□□ -1.63
LINC01088-210	ENST00000513153	DKK3	Q9UBP4	350 aa		4.86	□□□□□ -1.63
LINC01088-210	ENST00000513153	ZDHHC8	Q9ULC8	765 aa		4.86	□□□□□ -1.63
LINC01088-210	ENST00000513153	AGAP1	Q9UPQ3	857 aa		4.86	□□□□□ -1.63
LINC01088-210	ENST00000513153	RAD54B	Q9Y620	910 aa		4.86	□□□□□ -1.63
LINC01088-210	ENST00000513153	ZRANB2	O95218	330 aa	Known RBP eCLIP	4.85	□□□□□ -1.63
LINC01088-210	ENST00000513153	KIF20A	O95235	890 aa		4.85	□□□□□ -1.63
LINC01088-210	ENST00000513153	FAM163B	P0C2L3	166 aa		4.85	□□□□□ -1.63
LINC01088-210	ENST00000513153	PRR35	P0CG20	571 aa		4.85	□□□□□ -1.63
LINC01088-210	ENST00000513153	CD6	P30203	668 aa		4.85	□□□□□ -1.63
LINC01088-210	ENST00000513153	HK3	P52790	923 aa		4.85	□□□□□ -1.63
LINC01088-210	ENST00000513153	NOG	Q13253	232 aa		4.85	□□□□□ -1.63
LINC01088-210	ENST00000513153	RBM20	Q5T481	1227 aa	Known RBP	4.85	□□□□□ -1.63
LINC01088-210	ENST00000513153	ZNF626	Q68DY1	528 aa		4.85	□□□□□ -1.63
LINC01088-210	ENST00000513153	SUMO4	Q6EEV6	95 aa		4.85	□□□□□ -1.63
LINC01088-210	ENST00000513153	HEATR3	Q7Z4Q2	680 aa		4.85	□□□□□ -1.63
LINC01088-210	ENST00000513153	USP37	Q86T82	979 aa		4.85	□□□□□ -1.63
LINC01088-210	ENST00000513153	PRR18	Q8N4B5	295 aa		4.85	□□□□□ -1.63
LINC01088-210	ENST00000513153	TNPO1	Q92973	898 aa	Known RBP	4.85	□□□□□ -1.63
LINC01088-210	ENST00000513153	FAM136A	Q96C01	138 aa		4.85	□□□□□ -1.63
LINC01088-210	ENST00000513153	MRPL46	Q9H2W6	279 aa	Known RBP	4.85	□□□□□ -1.63
LINC01088-210	ENST00000513153	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	4.85	□□□□□ -1.63
LINC01088-210	ENST00000513153	TARM1	B6A8C7	271 aa		4.84	□□□□□ -1.63
LINC01088-210	ENST00000513153	NTN1	O95631	604 aa		4.84	□□□□□ -1.63
LINC01088-210	ENST00000513153	HNRNPC	P07910	306 aa	Known RBP eCLIP	4.84	□□□□□ -1.63
LINC01088-210	ENST00000513153	CHRM3	P20309	590 aa		4.84	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms