RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 ZSCAN16Q9H4T2 348 aaPredicted RBP15.86■□□□□ 0.13
CCHCR1-229ENST00000512418 TASP1Q9H6P5 420 aa15.86■□□□□ 0.13
CCHCR1-229ENST00000512418 LMAN1LQ9HAT1 526 aa15.86■□□□□ 0.13
CCHCR1-229ENST00000512418 RBAKQ9NYW8 714 aaPredicted RBP15.86■□□□□ 0.13
CCHCR1-229ENST00000512418 MTMR6Q9Y217 621 aa15.86■□□□□ 0.13
CCHCR1-229ENST00000512418 GPR179Q6PRD1 2367 aa15.85■□□□□ 0.13
CCHCR1-229ENST00000512418 SLC38A8A6NNN8 435 aa15.85■□□□□ 0.13
CCHCR1-229ENST00000512418 ITGB3P05106 788 aa15.85■□□□□ 0.13
CCHCR1-229ENST00000512418 CCR3P51677 355 aa15.85■□□□□ 0.13
CCHCR1-229ENST00000512418 NRLP54845 237 aa15.85■□□□□ 0.13
CCHCR1-229ENST00000512418 WNT7BP56706 349 aa15.85■□□□□ 0.13
CCHCR1-229ENST00000512418 TFAMQ00059 246 aaKnown RBP15.85■□□□□ 0.13
CCHCR1-229ENST00000512418 TAF12Q16514 161 aa15.85■□□□□ 0.13
CCHCR1-229ENST00000512418 ARHGAP29Q52LW3 1261 aa15.85■□□□□ 0.13
CCHCR1-229ENST00000512418 LRRTM3Q86VH5 581 aa15.85■□□□□ 0.13
CCHCR1-229ENST00000512418 SYCP3Q8IZU3 236 aa15.85■□□□□ 0.13
CCHCR1-229ENST00000512418 EPC1Q9H2F5 836 aa15.85■□□□□ 0.13
CCHCR1-229ENST00000512418 C8orf33Q9H7E9 229 aaPredicted RBP15.85■□□□□ 0.13
CCHCR1-229ENST00000512418 TMEM206Q9H813 350 aa15.85■□□□□ 0.13
CCHCR1-229ENST00000512418 IL21Q9HBE4 155 aa15.85■□□□□ 0.13
CCHCR1-229ENST00000512418 ABI2Q9NYB9 513 aaPredicted RBP15.85■□□□□ 0.13
CCHCR1-229ENST00000512418 ZMYM5Q9UJ78 669 aa15.85■□□□□ 0.13
CCHCR1-229ENST00000512418 DNAH14Q0VDD8 3507 aa15.85■□□□□ 0.13
CCHCR1-229ENST00000512418 A0A087X0B3 334 aa15.84■□□□□ 0.13
CCHCR1-229ENST00000512418 PRAMEF12O95522 483 aa15.84■□□□□ 0.13
CCHCR1-229ENST00000512418 HAPLN1P10915 354 aaPredicted RBP15.84■□□□□ 0.13
CCHCR1-229ENST00000512418 CHRNB1P11230 501 aa15.84■□□□□ 0.13
CCHCR1-229ENST00000512418 TDGF1P13385 188 aa15.84■□□□□ 0.13
CCHCR1-229ENST00000512418 POLR2BP30876 1174 aaKnown RBP15.84■□□□□ 0.13
CCHCR1-229ENST00000512418 CDR1P51861 262 aa15.84■□□□□ 0.13
CCHCR1-229ENST00000512418 KPNA1P52294 538 aaPredicted RBP15.84■□□□□ 0.13
CCHCR1-229ENST00000512418 CYP4F8P98187 520 aa15.84■□□□□ 0.13
CCHCR1-229ENST00000512418 TSPY1Q01534 308 aa15.84■□□□□ 0.13
CCHCR1-229ENST00000512418 LRRC32Q14392 662 aa15.84■□□□□ 0.13
CCHCR1-229ENST00000512418 DCLK2Q8N568 766 aa15.84■□□□□ 0.13
CCHCR1-229ENST00000512418 LRRC52Q8N7C0 313 aa15.84■□□□□ 0.13
CCHCR1-229ENST00000512418 C1orf127Q8N9H9 656 aa15.84■□□□□ 0.13
CCHCR1-229ENST00000512418 BPIFB1Q8TDL5 484 aa15.84■□□□□ 0.13
CCHCR1-229ENST00000512418 CACTINQ8WUQ7 758 aaKnown RBP15.84■□□□□ 0.13
CCHCR1-229ENST00000512418 LRRC3BQ96PB8 259 aa15.84■□□□□ 0.13
CCHCR1-229ENST00000512418 PANK2Q9BZ23 570 aa15.84■□□□□ 0.13
CCHCR1-229ENST00000512418 PANK4Q9NVE7 773 aa15.84■□□□□ 0.13
CCHCR1-229ENST00000512418 NCDNQ9UBB6 729 aa15.84■□□□□ 0.13
CCHCR1-229ENST00000512418 ITGA11Q9UKX5 1188 aa15.84■□□□□ 0.13
CCHCR1-229ENST00000512418 AGAP1Q9UPQ3 857 aa15.84■□□□□ 0.13
CCHCR1-229ENST00000512418 SMG5Q9UPR3 1016 aaKnown RBP15.84■□□□□ 0.13
CCHCR1-229ENST00000512418 PCDHB5Q9Y5E4 795 aa15.84■□□□□ 0.13
CCHCR1-229ENST00000512418 MYBPHLA2RUH7 354 aa15.83■□□□□ 0.12
CCHCR1-229ENST00000512418 SPECC1L-ADORA2AF8WAN1 911 aa15.83■□□□□ 0.12
CCHCR1-229ENST00000512418 TULP1O00294 542 aaPredicted RBP15.83■□□□□ 0.12
CCHCR1-229ENST00000512418 STX6O43752 255 aa15.83■□□□□ 0.12
CCHCR1-229ENST00000512418 EXTL3O43909 919 aa15.83■□□□□ 0.12
CCHCR1-229ENST00000512418 CTHP32929 405 aa15.83■□□□□ 0.12
CCHCR1-229ENST00000512418 NASPP49321 788 aaPredicted RBP15.83■□□□□ 0.12
CCHCR1-229ENST00000512418 PLCB2Q00722 1185 aa15.83■□□□□ 0.12
CCHCR1-229ENST00000512418 NFE2Q16621 373 aaPredicted RBP15.83■□□□□ 0.12
CCHCR1-229ENST00000512418 RALGPS2Q86X27 583 aaPredicted RBP15.83■□□□□ 0.12
CCHCR1-229ENST00000512418 GPIHBP1Q8IV16 184 aa15.83■□□□□ 0.12
CCHCR1-229ENST00000512418 CCDC65Q8IXS2 484 aa15.83■□□□□ 0.12
CCHCR1-229ENST00000512418 TMEM86AQ8N2M4 240 aa15.83■□□□□ 0.12
CCHCR1-229ENST00000512418 PDCL2Q8N4E4 241 aa15.83■□□□□ 0.12
CCHCR1-229ENST00000512418 PDILTQ8N807 584 aa15.83■□□□□ 0.12
CCHCR1-229ENST00000512418 ZSWIM2Q8NEG5 633 aa15.83■□□□□ 0.12
CCHCR1-229ENST00000512418 GIPC2Q8TF65 315 aa15.83■□□□□ 0.12
CCHCR1-229ENST00000512418 LEO1Q8WVC0 666 aaPredicted RBP15.83■□□□□ 0.12
CCHCR1-229ENST00000512418 SECISBP2LQ93073 1101 aaKnown RBP15.83■□□□□ 0.12
CCHCR1-229ENST00000512418 RMDN1Q96DB5 314 aa15.83■□□□□ 0.12
CCHCR1-229ENST00000512418 ZFYVE19Q96K21 471 aa15.83■□□□□ 0.12
CCHCR1-229ENST00000512418 CBWD1Q9BRT8 395 aa15.83■□□□□ 0.12
CCHCR1-229ENST00000512418 FGFBP2Q9BYJ0 223 aa15.83■□□□□ 0.12
CCHCR1-229ENST00000512418 TNMDQ9H2S6 317 aa15.83■□□□□ 0.12
CCHCR1-229ENST00000512418 CACNA1AO00555 2505 aa15.83■□□□□ 0.12
CCHCR1-229ENST00000512418 GOLGA8IPA6NC78 632 aa15.82■□□□□ 0.12
CCHCR1-229ENST00000512418 GOLGA8JA6NMD2 632 aa15.82■□□□□ 0.12
CCHCR1-229ENST00000512418 K7ELQ4 463 aaPredicted RBP15.82■□□□□ 0.12
CCHCR1-229ENST00000512418 KIAA0391O15091 583 aaKnown RBP15.82■□□□□ 0.12
CCHCR1-229ENST00000512418 HUS1O60921 280 aa15.82■□□□□ 0.12
CCHCR1-229ENST00000512418 SOX9P48436 509 aa15.82■□□□□ 0.12
CCHCR1-229ENST00000512418 STXBP4Q6ZWJ1 553 aa15.82■□□□□ 0.12
CCHCR1-229ENST00000512418 GPD1LQ8N335 351 aa15.82■□□□□ 0.12
CCHCR1-229ENST00000512418 CXorf38Q8TB03 319 aa15.82■□□□□ 0.12
CCHCR1-229ENST00000512418 SPATA18Q8TC71 538 aa15.82■□□□□ 0.12
CCHCR1-229ENST00000512418 ACBD6Q9BR61 282 aa15.82■□□□□ 0.12
CCHCR1-229ENST00000512418 SLC46A2Q9BY10 475 aa15.82■□□□□ 0.12
CCHCR1-229ENST00000512418 LRRC27Q9C0I9 530 aa15.82■□□□□ 0.12
CCHCR1-229ENST00000512418 ABCB6Q9NP58 842 aa15.82■□□□□ 0.12
CCHCR1-229ENST00000512418 TMLHEQ9NVH6 421 aa15.82■□□□□ 0.12
CCHCR1-229ENST00000512418 THG1LQ9NWX6 298 aaKnown RBP15.82■□□□□ 0.12
CCHCR1-229ENST00000512418 DDX43Q9NXZ2 648 aaKnown RBP15.82■□□□□ 0.12
CCHCR1-229ENST00000512418 GTSE1Q9NYZ3 720 aa15.82■□□□□ 0.12
CCHCR1-229ENST00000512418 L1RE1Q9UN81 338 aa15.82■□□□□ 0.12
CCHCR1-229ENST00000512418 PRPF6O94906 941 aaKnown RBP15.81■□□□□ 0.12
CCHCR1-229ENST00000512418 KRT19P08727 400 aa15.81■□□□□ 0.12
CCHCR1-229ENST00000512418 TMEM191BP0C7N4 346 aa15.81■□□□□ 0.12
CCHCR1-229ENST00000512418 CSH1P0DML2 217 aa15.81■□□□□ 0.12
CCHCR1-229ENST00000512418 CSH2P0DML3 217 aa15.81■□□□□ 0.12
CCHCR1-229ENST00000512418 HMGA1P17096 107 aaKnown RBP15.81■□□□□ 0.12
CCHCR1-229ENST00000512418 DDX6P26196 483 aaKnown RBP eCLIP15.81■□□□□ 0.12
CCHCR1-229ENST00000512418 AVPR1AP37288 418 aa15.81■□□□□ 0.12
CCHCR1-229ENST00000512418 CXCL12P48061 93 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms