RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 NBR1Q14596 966 aa20.67■□□□□ 0.9
HMGCS1-206ENST00000511774 USP37Q86T82 979 aa20.67■□□□□ 0.9
HMGCS1-206ENST00000511774 CMTM8Q8IZV2 173 aa20.67■□□□□ 0.9
HMGCS1-206ENST00000511774 USP13Q92995 863 aaPredicted RBP20.67■□□□□ 0.9
HMGCS1-206ENST00000511774 KIF12Q96FN5 646 aa20.67■□□□□ 0.9
HMGCS1-206ENST00000511774 OXCT2Q9BYC2 517 aaPredicted RBP20.67■□□□□ 0.9
HMGCS1-206ENST00000511774 FGF19O95750 216 aa20.66■□□□□ 0.9
HMGCS1-206ENST00000511774 TYMPP19971 482 aa20.66■□□□□ 0.9
HMGCS1-206ENST00000511774 MCL1Q07820 350 aa20.66■□□□□ 0.9
HMGCS1-206ENST00000511774 ELF2Q15723 593 aa20.66■□□□□ 0.9
HMGCS1-206ENST00000511774 HAUS3Q68CZ6 603 aa20.66■□□□□ 0.9
HMGCS1-206ENST00000511774 RINT1Q6NUQ1 792 aa20.66■□□□□ 0.9
HMGCS1-206ENST00000511774 DSTYKQ6XUX3 929 aa20.66■□□□□ 0.9
HMGCS1-206ENST00000511774 C1orf186Q6ZWK4 172 aa20.66■□□□□ 0.9
HMGCS1-206ENST00000511774 STKLD1Q8NE28 680 aa20.66■□□□□ 0.9
HMGCS1-206ENST00000511774 RPLP0P6Q8NHW5 317 aa20.66■□□□□ 0.9
HMGCS1-206ENST00000511774 GIPC2Q8TF65 315 aa20.66■□□□□ 0.9
HMGCS1-206ENST00000511774 SEPT5Q99719 369 aaPredicted RBP20.66■□□□□ 0.9
HMGCS1-206ENST00000511774 THG1LQ9NWX6 298 aaKnown RBP20.66■□□□□ 0.9
HMGCS1-206ENST00000511774 TNRC6BQ9UPQ9 1833 aaKnown RBP20.65■□□□□ 0.9
HMGCS1-206ENST00000511774 PP2D1A8MPX8 630 aa20.65■□□□□ 0.9
HMGCS1-206ENST00000511774 LACTBL1A8MY62 500 aa20.65■□□□□ 0.9
HMGCS1-206ENST00000511774 BCKDHBP21953 392 aa20.65■□□□□ 0.9
HMGCS1-206ENST00000511774 FXR2P51116 673 aaKnown RBP eCLIP20.65■□□□□ 0.91e-11■■□□□ 12.8
HMGCS1-206ENST00000511774 SLC39A12Q504Y0 691 aa20.65■□□□□ 0.9
HMGCS1-206ENST00000511774 KIAA1211LQ6NV74 962 aa20.65■□□□□ 0.9
HMGCS1-206ENST00000511774 LRSAM1Q6UWE0 723 aa20.65■□□□□ 0.9
HMGCS1-206ENST00000511774 ITIH5Q86UX2 942 aa20.65■□□□□ 0.9
HMGCS1-206ENST00000511774 MAB21L3Q8N8X9 362 aa20.65■□□□□ 0.9
HMGCS1-206ENST00000511774 TMEM161BQ8NDZ6 487 aa20.65■□□□□ 0.9
HMGCS1-206ENST00000511774 SENP8Q96LD8 212 aa20.65■□□□□ 0.9
HMGCS1-206ENST00000511774 EBF1Q9UH73 591 aa20.65■□□□□ 0.9
HMGCS1-206ENST00000511774 TBX20Q9UMR3 447 aa20.65■□□□□ 0.9
HMGCS1-206ENST00000511774 RBM19Q9Y4C8 960 aaKnown RBP20.65■□□□□ 0.9
HMGCS1-206ENST00000511774 FAM189A1O60320 539 aa20.64■□□□□ 0.89
HMGCS1-206ENST00000511774 RHOBTB1O94844 696 aa20.64■□□□□ 0.89
HMGCS1-206ENST00000511774 CYP3A5P20815 502 aa20.64■□□□□ 0.89
HMGCS1-206ENST00000511774 CDC25CP30307 473 aa20.64■□□□□ 0.89
HMGCS1-206ENST00000511774 GJA4P35212 333 aa20.64■□□□□ 0.89
HMGCS1-206ENST00000511774 LILRA4P59901 499 aa20.64■□□□□ 0.89
HMGCS1-206ENST00000511774 DMC1Q14565 340 aa20.64■□□□□ 0.89
HMGCS1-206ENST00000511774 DAB2IPQ5VWQ8 1189 aa20.64■□□□□ 0.89
HMGCS1-206ENST00000511774 PMS2CLQ68D20 193 aa20.64■□□□□ 0.89
HMGCS1-206ENST00000511774 SYT13Q7L8C5 426 aa20.64■□□□□ 0.89
HMGCS1-206ENST00000511774 LRRTM3Q86VH5 581 aa20.64■□□□□ 0.89
HMGCS1-206ENST00000511774 DEFB124Q8NES8 71 aa20.64■□□□□ 0.89
HMGCS1-206ENST00000511774 ZCCHC14Q8WYQ9 949 aaKnown RBP20.64■□□□□ 0.89
HMGCS1-206ENST00000511774 NTPCRQ9BSD7 190 aaKnown RBP20.64■□□□□ 0.89
HMGCS1-206ENST00000511774 PLEKHA5Q9HAU0 1116 aa20.64■□□□□ 0.89
HMGCS1-206ENST00000511774 LRWD1Q9UFC0 647 aa20.64■□□□□ 0.89
HMGCS1-206ENST00000511774 UBQLN1Q9UMX0 589 aaKnown RBP20.64■□□□□ 0.89
HMGCS1-206ENST00000511774 TMEM8BA6NDV4 472 aa20.63■□□□□ 0.89
HMGCS1-206ENST00000511774 APBB3O95704 486 aa20.63■□□□□ 0.89
HMGCS1-206ENST00000511774 F11P03951 625 aa20.63■□□□□ 0.89
HMGCS1-206ENST00000511774 MAPTP10636 758 aaKnown RBP20.63■□□□□ 0.89
HMGCS1-206ENST00000511774 CEACAM1P13688 526 aa20.63■□□□□ 0.89
HMGCS1-206ENST00000511774 HMGA1P17096 107 aaKnown RBP20.63■□□□□ 0.89
HMGCS1-206ENST00000511774 CSRP1P21291 193 aaKnown RBP20.63■□□□□ 0.89
HMGCS1-206ENST00000511774 CDC25AP30304 524 aa20.63■□□□□ 0.89
HMGCS1-206ENST00000511774 IRX4P78413 519 aa20.63■□□□□ 0.89
HMGCS1-206ENST00000511774 RAD51AP2Q09MP3 1159 aa20.63■□□□□ 0.89
HMGCS1-206ENST00000511774 PTPAQ15257 358 aa20.63■□□□□ 0.89
HMGCS1-206ENST00000511774 ENOX2Q16206 610 aaKnown RBP20.63■□□□□ 0.89
HMGCS1-206ENST00000511774 MGAT5BQ3V5L5 792 aa20.63■□□□□ 0.89
HMGCS1-206ENST00000511774 TXNDC8Q6A555 127 aa20.63■□□□□ 0.89
HMGCS1-206ENST00000511774 SNX29Q8TEQ0 813 aa20.63■□□□□ 0.89
HMGCS1-206ENST00000511774 P2RY13Q9BPV8 354 aa20.63■□□□□ 0.89
HMGCS1-206ENST00000511774 TPSD1Q9BZJ3 242 aa20.63■□□□□ 0.89
HMGCS1-206ENST00000511774 ZCWPW1Q9H0M4 648 aa20.63■□□□□ 0.89
HMGCS1-206ENST00000511774 TMEM9BQ9NQ34 198 aa20.63■□□□□ 0.89
HMGCS1-206ENST00000511774 HSFX1Q9UBD0 423 aa20.63■□□□□ 0.89
HMGCS1-206ENST00000511774 LHX6Q9UPM6 363 aa20.63■□□□□ 0.89
HMGCS1-206ENST00000511774 CELSR3Q9NYQ7 3312 aa20.63■□□□□ 0.89
HMGCS1-206ENST00000511774 TCHHQ07283 1943 aa20.63■□□□□ 0.89
HMGCS1-206ENST00000511774 HYAL3O43820 417 aaPredicted RBP20.62■□□□□ 0.89
HMGCS1-206ENST00000511774 CLTAP09496 248 aa20.62■□□□□ 0.89
HMGCS1-206ENST00000511774 DRD1P21728 446 aa20.62■□□□□ 0.89
HMGCS1-206ENST00000511774 GBP1P32455 592 aa20.62■□□□□ 0.89
HMGCS1-206ENST00000511774 NLRP12P59046 1061 aa20.62■□□□□ 0.89
HMGCS1-206ENST00000511774 TTC38Q5R3I4 469 aa20.62■□□□□ 0.89
HMGCS1-206ENST00000511774 ARMCX5Q6P1M9 558 aa20.62■□□□□ 0.89
HMGCS1-206ENST00000511774 IGSF22Q8N9C0 903 aa20.62■□□□□ 0.89
HMGCS1-206ENST00000511774 DRC1Q96MC2 740 aa20.62■□□□□ 0.89
HMGCS1-206ENST00000511774 MMTAG2Q9BU76 263 aaKnown RBP20.62■□□□□ 0.89
HMGCS1-206ENST00000511774 ANAPC1Q9H1A4 1944 aa20.62■□□□□ 0.89
HMGCS1-206ENST00000511774 CLDN3O15551 220 aa20.61■□□□□ 0.89
HMGCS1-206ENST00000511774 GPR15P49685 360 aa20.61■□□□□ 0.89
HMGCS1-206ENST00000511774 DGKEP52429 567 aa20.61■□□□□ 0.89
HMGCS1-206ENST00000511774 TRIM29Q14134 588 aa20.61■□□□□ 0.89
HMGCS1-206ENST00000511774 KARSQ15046 597 aaKnown RBP20.61■□□□□ 0.89
HMGCS1-206ENST00000511774 IL17AQ16552 155 aa20.61■□□□□ 0.89
HMGCS1-206ENST00000511774 ZPBP2Q6X784 338 aa20.61■□□□□ 0.89
HMGCS1-206ENST00000511774 SPIRE2Q8WWL2 714 aa20.61■□□□□ 0.89
HMGCS1-206ENST00000511774 TDP1Q9NUW8 608 aa20.61■□□□□ 0.89
HMGCS1-206ENST00000511774 KLK13Q9UKR3 277 aa20.61■□□□□ 0.89
HMGCS1-206ENST00000511774 ADAMTS9Q9P2N4 1935 aa20.61■□□□□ 0.89
HMGCS1-206ENST00000511774 TAF4O00268 1085 aa20.6■□□□□ 0.89
HMGCS1-206ENST00000511774 KHNYNO15037 678 aaKnown RBP20.6■□□□□ 0.89
HMGCS1-206ENST00000511774 TADA3O75528 432 aa20.6■□□□□ 0.89
HMGCS1-206ENST00000511774 CYP11A1P05108 521 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms