RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 OR52N2Q8NGI0 321 aa6.41□□□□□ -1.38
HMGB1P47-201ENST00000511281 SPPL3Q8TCT6 385 aa6.41□□□□□ -1.38
HMGB1P47-201ENST00000511281 OTUD7AQ8TE49 926 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P47-201ENST00000511281 TFAP2CQ92754 450 aa6.41□□□□□ -1.38
HMGB1P47-201ENST00000511281 LRRC46Q96FV0 321 aa6.41□□□□□ -1.38
HMGB1P47-201ENST00000511281 FAM84AQ96KN4 292 aa6.41□□□□□ -1.38
HMGB1P47-201ENST00000511281 SORBS1Q9BX66 1292 aaKnown RBP6.41□□□□□ -1.38
HMGB1P47-201ENST00000511281 MS4A7Q9GZW8 240 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P47-201ENST00000511281 FAM83DQ9H4H8 585 aa6.41□□□□□ -1.38
HMGB1P47-201ENST00000511281 AS3MTQ9HBK9 375 aa6.41□□□□□ -1.38
HMGB1P47-201ENST00000511281 ITM2CQ9NQX7 267 aa6.41□□□□□ -1.38
HMGB1P47-201ENST00000511281 ETAA1Q9NY74 926 aa6.41□□□□□ -1.38
HMGB1P47-201ENST00000511281 RRN3Q9NYV6 651 aa6.41□□□□□ -1.38
HMGB1P47-201ENST00000511281 LRFN1Q9P244 771 aa6.41□□□□□ -1.38
HMGB1P47-201ENST00000511281 DKK4Q9UBT3 224 aa6.41□□□□□ -1.38
HMGB1P47-201ENST00000511281 A0A1B0GTL3 188 aa6.4□□□□□ -1.38
HMGB1P47-201ENST00000511281 M0QYG6 137 aa6.4□□□□□ -1.38
HMGB1P47-201ENST00000511281 FAM155BO75949 473 aa6.4□□□□□ -1.38
HMGB1P47-201ENST00000511281 CKBP12277 381 aa6.4□□□□□ -1.38
HMGB1P47-201ENST00000511281 MGAT1P26572 445 aa6.4□□□□□ -1.38
HMGB1P47-201ENST00000511281 CPT1AP50416 773 aa6.4□□□□□ -1.38
HMGB1P47-201ENST00000511281 RAP2BP61225 183 aa6.4□□□□□ -1.38
HMGB1P47-201ENST00000511281 SLFN5Q08AF3 891 aa6.4□□□□□ -1.38
HMGB1P47-201ENST00000511281 ARHGEF7Q14155 803 aa6.4□□□□□ -1.38
HMGB1P47-201ENST00000511281 SLC5A9Q2M3M2 681 aa6.4□□□□□ -1.38
HMGB1P47-201ENST00000511281 FAM214AQ32MH5 1076 aa6.4□□□□□ -1.38
HMGB1P47-201ENST00000511281 FBXO47Q5MNV8 452 aa6.4□□□□□ -1.38
HMGB1P47-201ENST00000511281 RRAGBQ5VZM2 374 aa6.4□□□□□ -1.38
HMGB1P47-201ENST00000511281 SPTY2D1Q68D10 685 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P47-201ENST00000511281 ZDHHC24Q6UX98 284 aa6.4□□□□□ -1.38
HMGB1P47-201ENST00000511281 ATG14Q6ZNE5 492 aa6.4□□□□□ -1.38
HMGB1P47-201ENST00000511281 CLASRPQ8N2M8 674 aaKnown RBP6.4□□□□□ -1.38
HMGB1P47-201ENST00000511281 IPO4Q8TEX9 1081 aaKnown RBP6.4□□□□□ -1.38
HMGB1P47-201ENST00000511281 NEIL1Q96FI4 390 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P47-201ENST00000511281 PPP1R9BQ96SB3 815 aa6.4□□□□□ -1.38
HMGB1P47-201ENST00000511281 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.4□□□□□ -1.38
HMGB1P47-201ENST00000511281 SMG5Q9UPR3 1016 aaKnown RBP6.4□□□□□ -1.38
HMGB1P47-201ENST00000511281 OR2W5A6NFC9 320 aa6.39□□□□□ -1.39
HMGB1P47-201ENST00000511281 PRR5-ARHGAP8B1AHC4 643 aa6.39□□□□□ -1.39
HMGB1P47-201ENST00000511281 TRIM38O00635 465 aa6.39□□□□□ -1.39
HMGB1P47-201ENST00000511281 RASSF9O75901 435 aa6.39□□□□□ -1.39
HMGB1P47-201ENST00000511281 AGR2O95994 175 aa6.39□□□□□ -1.39
HMGB1P47-201ENST00000511281 INHBBP09529 407 aa6.39□□□□□ -1.39
HMGB1P47-201ENST00000511281 CR2P20023 1033 aa6.39□□□□□ -1.39
HMGB1P47-201ENST00000511281 GCSHP23434 173 aa6.39□□□□□ -1.39
HMGB1P47-201ENST00000511281 SLC5A2P31639 672 aa6.39□□□□□ -1.39
HMGB1P47-201ENST00000511281 RPS19P39019 145 aaKnown RBP6.39□□□□□ -1.39
HMGB1P47-201ENST00000511281 AFF3P51826 1226 aaKnown RBP6.39□□□□□ -1.39
HMGB1P47-201ENST00000511281 INSCQ1MX18 579 aa6.39□□□□□ -1.39
HMGB1P47-201ENST00000511281 PLAG1Q6DJT9 500 aa6.39□□□□□ -1.39
HMGB1P47-201ENST00000511281 PLEKHH3Q7Z736 793 aa6.39□□□□□ -1.39
HMGB1P47-201ENST00000511281 TMEM151BQ8IW70 566 aa6.39□□□□□ -1.39
HMGB1P47-201ENST00000511281 SUGP1Q8IWZ8 645 aaKnown RBP6.39□□□□□ -1.39
HMGB1P47-201ENST00000511281 COLGALT2Q8IYK4 626 aa6.39□□□□□ -1.39
HMGB1P47-201ENST00000511281 PDPRQ8NCN5 879 aa6.39□□□□□ -1.39
HMGB1P47-201ENST00000511281 FAM46DQ8NEK8 389 aa6.39□□□□□ -1.39
HMGB1P47-201ENST00000511281 STYXQ8WUJ0 223 aa6.39□□□□□ -1.39
HMGB1P47-201ENST00000511281 RSC1A1Q92681 617 aa6.39□□□□□ -1.39
HMGB1P47-201ENST00000511281 ZSCAN31Q96LW9 406 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P47-201ENST00000511281 DDX23Q9BUQ8 820 aaKnown RBP6.39□□□□□ -1.39
HMGB1P47-201ENST00000511281 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.39□□□□□ -1.39
HMGB1P47-201ENST00000511281 TBC1D23Q9NUY8 699 aa6.39□□□□□ -1.39
HMGB1P47-201ENST00000511281 HDAC9Q9UKV0 1011 aa6.39□□□□□ -1.39
HMGB1P47-201ENST00000511281 DTNAQ9Y4J8 743 aa6.39□□□□□ -1.39
HMGB1P47-201ENST00000511281 TCAF2A6NFQ2 919 aa6.38□□□□□ -1.39
HMGB1P47-201ENST00000511281 NOBOXO60393 691 aa6.38□□□□□ -1.39
HMGB1P47-201ENST00000511281 KIF20AO95235 890 aa6.38□□□□□ -1.39
HMGB1P47-201ENST00000511281 NPPBP16860 134 aa6.38□□□□□ -1.39
HMGB1P47-201ENST00000511281 SLC6A2P23975 617 aa6.38□□□□□ -1.39
HMGB1P47-201ENST00000511281 MAN1A1P33908 653 aa6.38□□□□□ -1.39
HMGB1P47-201ENST00000511281 TOB1P50616 345 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P47-201ENST00000511281 PIGFQ07326 219 aa6.38□□□□□ -1.39
HMGB1P47-201ENST00000511281 CNGB1Q14028 1251 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P47-201ENST00000511281 DCAF17Q5H9S7 520 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P47-201ENST00000511281 MRNIPQ6NTE8 343 aa6.38□□□□□ -1.39
HMGB1P47-201ENST00000511281 EFCAB12Q6NXP0 572 aa6.38□□□□□ -1.39
HMGB1P47-201ENST00000511281 XYLT1Q86Y38 959 aa6.38□□□□□ -1.39
HMGB1P47-201ENST00000511281 GATAD2AQ86YP4 633 aa6.38□□□□□ -1.39
HMGB1P47-201ENST00000511281 SLC17A8Q8NDX2 589 aa6.38□□□□□ -1.39
HMGB1P47-201ENST00000511281 PPHLN1Q8NEY8 458 aaKnown RBP6.38□□□□□ -1.39
HMGB1P47-201ENST00000511281 MDGA1Q8NFP4 955 aa6.38□□□□□ -1.39
HMGB1P47-201ENST00000511281 TBC1D15Q8TC07 691 aa6.38□□□□□ -1.39
HMGB1P47-201ENST00000511281 MPHOSPH9Q99550 1183 aa6.38□□□□□ -1.39
HMGB1P47-201ENST00000511281 DPYSL5Q9BPU6 564 aa6.38□□□□□ -1.39
HMGB1P47-201ENST00000511281 IMPG2Q9BZV3 1241 aa6.38□□□□□ -1.39
HMGB1P47-201ENST00000511281 ZBTB26Q9HCK0 441 aa6.38□□□□□ -1.39
HMGB1P47-201ENST00000511281 SRP68Q9UHB9 627 aaKnown RBP6.38□□□□□ -1.39
HMGB1P47-201ENST00000511281 HERC5Q9UII4 1024 aaKnown RBP6.38□□□□□ -1.39
HMGB1P47-201ENST00000511281 AQP7P3A6NL99 342 aa6.37□□□□□ -1.39
HMGB1P47-201ENST00000511281 DRGXA6NNA5 263 aa6.37□□□□□ -1.39
HMGB1P47-201ENST00000511281 EIF3FO00303 357 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P47-201ENST00000511281 PIP5K1BO14986 540 aa6.37□□□□□ -1.39
HMGB1P47-201ENST00000511281 DCLK1O15075 740 aa6.37□□□□□ -1.39
HMGB1P47-201ENST00000511281 B4GALT4O60513 344 aa6.37□□□□□ -1.39
HMGB1P47-201ENST00000511281 TRIM13O60858 407 aa6.37□□□□□ -1.39
HMGB1P47-201ENST00000511281 TNFRSF6BO95407 300 aa6.37□□□□□ -1.39
HMGB1P47-201ENST00000511281 TSPAN15O95858 294 aa6.37□□□□□ -1.39
HMGB1P47-201ENST00000511281 ITGA2BP08514 1039 aa6.37□□□□□ -1.39
HMGB1P47-201ENST00000511281 ATXN1LP0C7T5 689 aaKnown RBP6.37□□□□□ -1.39
HMGB1P47-201ENST00000511281 BDNFP23560 247 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms