RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 MFSD14CQ5VZR4 134 aa6.74□□□□□ -1.33
GYPB-212ENST00000511198 MORC1Q86VD1 984 aa6.74□□□□□ -1.33
GYPB-212ENST00000511198 LRRTM3Q86VH5 581 aa6.74□□□□□ -1.33
GYPB-212ENST00000511198 SHCBP1Q8NEM2 672 aa6.74□□□□□ -1.33
GYPB-212ENST00000511198 TDRD7Q8NHU6 1098 aaKnown RBP6.74□□□□□ -1.33
GYPB-212ENST00000511198 APPBP2Q92624 585 aa6.74□□□□□ -1.33
GYPB-212ENST00000511198 RABGGTAQ92696 567 aa6.74□□□□□ -1.33
GYPB-212ENST00000511198 NINJ1Q92982 152 aa6.74□□□□□ -1.33
GYPB-212ENST00000511198 LPPQ93052 612 aa6.74□□□□□ -1.33
GYPB-212ENST00000511198 HOOK2Q96ED9 719 aa6.74□□□□□ -1.33
GYPB-212ENST00000511198 HAPLN2Q9GZV7 340 aa6.74□□□□□ -1.33
GYPB-212ENST00000511198 VPS11Q9H270 941 aa6.74□□□□□ -1.33
GYPB-212ENST00000511198 TXNRD2Q9NNW7 524 aa6.74□□□□□ -1.33
GYPB-212ENST00000511198 IL23AQ9NPF7 189 aa6.74□□□□□ -1.33
GYPB-212ENST00000511198 KCMF1Q9P0J7 381 aa6.74□□□□□ -1.33
GYPB-212ENST00000511198 DENND2AQ9ULE3 1009 aa6.74□□□□□ -1.33
GYPB-212ENST00000511198 COL4A4P53420 1690 aaPredicted RBP6.74□□□□□ -1.33
GYPB-212ENST00000511198 PHIPQ8WWQ0 1821 aa6.73□□□□□ -1.33
GYPB-212ENST00000511198 DSPP15924 2871 aaKnown RBP6.73□□□□□ -1.33
GYPB-212ENST00000511198 TRIM75PA6NK02 468 aa6.73□□□□□ -1.33
GYPB-212ENST00000511198 SNAP23O00161 211 aa6.73□□□□□ -1.33
GYPB-212ENST00000511198 KPNA6O60684 536 aa6.73□□□□□ -1.33
GYPB-212ENST00000511198 H2AFYO75367 372 aaKnown RBP6.73□□□□□ -1.33
GYPB-212ENST00000511198 STAT3P40763 770 aa6.73□□□□□ -1.33
GYPB-212ENST00000511198 SESN2P58004 480 aaPredicted RBP6.73□□□□□ -1.33
GYPB-212ENST00000511198 ADAM8P78325 824 aa6.73□□□□□ -1.33
GYPB-212ENST00000511198 ATP2C1P98194 919 aaPredicted RBP6.73□□□□□ -1.33
GYPB-212ENST00000511198 DSG1Q02413 1049 aa6.73□□□□□ -1.33
GYPB-212ENST00000511198 GRM7Q14831 915 aa6.73□□□□□ -1.33
GYPB-212ENST00000511198 CCDC152Q4G0S7 254 aa6.73□□□□□ -1.33
GYPB-212ENST00000511198 PRAMEF9Q5VWM5 478 aa6.73□□□□□ -1.33
GYPB-212ENST00000511198 KANSL1Q7Z3B3 1105 aa6.73□□□□□ -1.33
GYPB-212ENST00000511198 FAM83AQ86UY5 434 aa6.73□□□□□ -1.33
GYPB-212ENST00000511198 NXPE1Q8N323 547 aa6.73□□□□□ -1.33
GYPB-212ENST00000511198 ZNF808Q8N4W9 903 aaPredicted RBP6.73□□□□□ -1.33
GYPB-212ENST00000511198 TMEM199Q8N511 208 aa6.73□□□□□ -1.33
GYPB-212ENST00000511198 SLC16A11Q8NCK7 471 aa6.73□□□□□ -1.33
GYPB-212ENST00000511198 GFM2Q969S9 779 aaKnown RBP6.73□□□□□ -1.33
GYPB-212ENST00000511198 EDC3Q96F86 508 aaKnown RBP6.73□□□□□ -1.33
GYPB-212ENST00000511198 PORCNQ9H237 461 aa6.73□□□□□ -1.33
GYPB-212ENST00000511198 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.73□□□□□ -1.33
GYPB-212ENST00000511198 MRPL42Q9Y6G3 142 aaKnown RBP6.73□□□□□ -1.33
GYPB-212ENST00000511198 TENM4Q6N022 2769 aa6.72□□□□□ -1.33
GYPB-212ENST00000511198 ZNF891A8MT65 544 aaPredicted RBP6.72□□□□□ -1.33
GYPB-212ENST00000511198 PDGFBP01127 241 aaPredicted RBP6.72□□□□□ -1.33
GYPB-212ENST00000511198 CYBAP13498 195 aa6.72□□□□□ -1.33
GYPB-212ENST00000511198 IL1R1P14778 569 aa6.72□□□□□ -1.33
GYPB-212ENST00000511198 ACVRL1P37023 503 aa6.72□□□□□ -1.33
GYPB-212ENST00000511198 ATXN1P54253 815 aaKnown RBP6.72□□□□□ -1.33
GYPB-212ENST00000511198 ADCY1Q08828 1119 aa6.72□□□□□ -1.33
GYPB-212ENST00000511198 FOXE3Q13461 319 aa6.72□□□□□ -1.33
GYPB-212ENST00000511198 RIN1Q13671 783 aa6.72□□□□□ -1.33
GYPB-212ENST00000511198 USP39Q53GS9 565 aaKnown RBP6.72□□□□□ -1.33
GYPB-212ENST00000511198 RNF207Q6ZRF8 634 aa6.72□□□□□ -1.33
GYPB-212ENST00000511198 GPR142Q7Z601 462 aa6.72□□□□□ -1.33
GYPB-212ENST00000511198 JAZF1Q86VZ6 243 aa6.72□□□□□ -1.33
GYPB-212ENST00000511198 RTF1Q92541 710 aaKnown RBP6.72□□□□□ -1.33
GYPB-212ENST00000511198 EXTL1Q92935 676 aa6.72□□□□□ -1.33
GYPB-212ENST00000511198 SLC7A6OSQ96CW6 309 aaPredicted RBP6.72□□□□□ -1.33
GYPB-212ENST00000511198 ZNF503Q96F45 646 aa6.72□□□□□ -1.33
GYPB-212ENST00000511198 PITHD1Q9GZP4 211 aaPredicted RBP6.72□□□□□ -1.33
GYPB-212ENST00000511198 SCAND2PQ9GZW5 306 aaPredicted RBP6.72□□□□□ -1.33
GYPB-212ENST00000511198 SLC6A15Q9H2J7 730 aa6.72□□□□□ -1.33
GYPB-212ENST00000511198 ZMAT4Q9H898 229 aa6.72□□□□□ -1.33
GYPB-212ENST00000511198 ZKSCAN5Q9Y2L8 839 aa6.72□□□□□ -1.33
GYPB-212ENST00000511198 TEP1Q99973 2627 aaKnown RBP6.72□□□□□ -1.33
GYPB-212ENST00000511198 SPEF2Q9C093 1822 aa6.71□□□□□ -1.33
GYPB-212ENST00000511198 EIF2S2P20042 333 aaKnown RBP6.71□□□□□ -1.34
GYPB-212ENST00000511198 CYP2C18P33260 490 aa6.71□□□□□ -1.34
GYPB-212ENST00000511198 NEK4P51957 841 aa6.71□□□□□ -1.34
GYPB-212ENST00000511198 BCAR1P56945 870 aa6.71□□□□□ -1.34
GYPB-212ENST00000511198 PCBP1Q15365 356 aaKnown RBP eCLIP6.71□□□□□ -1.342e-29■■■■■ 27.7
GYPB-212ENST00000511198 MIIPQ5JXC2 388 aa6.71□□□□□ -1.34
GYPB-212ENST00000511198 PHYKPLQ8IUZ5 450 aa6.71□□□□□ -1.34
GYPB-212ENST00000511198 SCYL3Q8IZE3 742 aa6.71□□□□□ -1.34
GYPB-212ENST00000511198 GDPD5Q8WTR4 605 aa6.71□□□□□ -1.34
GYPB-212ENST00000511198 DYDC2Q96IM9 177 aa6.71□□□□□ -1.34
GYPB-212ENST00000511198 GPHA2Q96T91 129 aa6.71□□□□□ -1.34
GYPB-212ENST00000511198 MTIF3Q9H2K0 278 aaKnown RBP6.71□□□□□ -1.34
GYPB-212ENST00000511198 TOMM22Q9NS69 142 aa6.71□□□□□ -1.34
GYPB-212ENST00000511198 IFT57Q9NWB7 429 aa6.71□□□□□ -1.34
GYPB-212ENST00000511198 HECAQ9UBI9 543 aaPredicted RBP6.71□□□□□ -1.34
GYPB-212ENST00000511198 RBM8AQ9Y5S9 174 aaKnown RBP6.71□□□□□ -1.34
GYPB-212ENST00000511198 TGM5O43548 720 aa6.7□□□□□ -1.34
GYPB-212ENST00000511198 GAS7O60861 476 aa6.7□□□□□ -1.34
GYPB-212ENST00000511198 PRPF6O94906 941 aaKnown RBP6.7□□□□□ -1.34
GYPB-212ENST00000511198 MAPK4P31152 587 aa6.7□□□□□ -1.34
GYPB-212ENST00000511198 ADCY2Q08462 1091 aa6.7□□□□□ -1.34
GYPB-212ENST00000511198 SIGLEC14Q08ET2 396 aa6.7□□□□□ -1.34
GYPB-212ENST00000511198 NRN1LQ496H8 165 aa6.7□□□□□ -1.34
GYPB-212ENST00000511198 FAM47AQ5JRC9 791 aa6.7□□□□□ -1.34
GYPB-212ENST00000511198 FKBP1CQ5VVH2 108 aa6.7□□□□□ -1.34
GYPB-212ENST00000511198 SPTY2D1Q68D10 685 aaPredicted RBP6.7□□□□□ -1.34
GYPB-212ENST00000511198 CNNM4Q6P4Q7 775 aa6.7□□□□□ -1.34
GYPB-212ENST00000511198 UNQ6494/PRO21346Q6UXR6 183 aa6.7□□□□□ -1.34
GYPB-212ENST00000511198 ADGRE4PQ86SQ3 457 aa6.7□□□□□ -1.34
GYPB-212ENST00000511198 DHX37Q8IY37 1157 aaKnown RBP6.7□□□□□ -1.34
GYPB-212ENST00000511198 EFHBQ8N7U6 833 aa6.7□□□□□ -1.34
GYPB-212ENST00000511198 TMEM105Q8N8V8 129 aa6.7□□□□□ -1.34
GYPB-212ENST00000511198 GPRC5AQ8NFJ5 357 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms