RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 KCNG1Q9UIX4 513 aa7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 FBXL5Q9UKA1 691 aa7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 POLIQ9UNA4 740 aa7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 NOVA2Q9UNW9 492 aaKnown RBP7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 BACE2Q9Y5Z0 518 aa7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 CDY1Q9Y6F8 540 aa7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 OBSL1O75147 1896 aa7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 WDFY4Q6ZS81 3184 aa7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 BIN1O00499 593 aa7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 PDXKO00764 312 aa7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 SYN3O14994 580 aa7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 LZTS3O60299 673 aaPredicted RBP7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 SOAT2O75908 522 aa7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 IL18RAPO95256 599 aa7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 GLUD1P00367 558 aa7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 CST3P01034 146 aaPredicted RBP7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 CYP11A1P05108 521 aa7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 SP100P23497 879 aaPredicted RBP7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 RPL9P32969 192 aaKnown RBP7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 ABCD1P33897 745 aa7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 TFAMQ00059 246 aaKnown RBP7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 PSMD2Q13200 908 aa7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 RAB33AQ14088 237 aa7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 KYAT1Q16773 422 aa7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 SLC5A9Q2M3M2 681 aa7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 CRTC2Q53ET0 693 aaPredicted RBP7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 ZNF658Q5TYW1 1059 aaPredicted RBP7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 WSCD1Q658N2 575 aa7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 CENPPQ6IPU0 288 aa7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 KIAA1841Q6NSI8 718 aa7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 TTI2Q6NXR4 508 aa7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 EP400NLQ6ZTU2 488 aa7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 TRAPPC11Q7Z392 1133 aa7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 LRRTM3Q86VH5 581 aa7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 PALB2Q86YC2 1186 aa7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 WDR49Q8IV35 697 aa7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 CD302Q8IX05 232 aa7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 ELOA2Q8IYF1 753 aaPredicted RBP7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 PDCL2Q8N4E4 241 aa7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 CMASQ8NFW8 434 aaPredicted RBP7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 PARD3BQ8TEW8 1205 aa7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 CASP10Q92851 521 aa7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 UHRF1Q96T88 793 aaPredicted RBP7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 RHOBTB2Q9BYZ6 727 aa7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 APOBEC3GQ9HC16 384 aaKnown RBP7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 C11orf16Q9NQ32 467 aa7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 TMEM30AQ9NV96 361 aa7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 HCFC1R1Q9NWW0 138 aa7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 HMGXB4Q9UGU5 601 aa7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 PATJQ8NI35 1801 aa7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 KIF26AQ9ULI4 1882 aaPredicted RBP7.77□□□□□ -1.17
TOPBP1-207ENST00000509162 TECTAO75443 2155 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 MTMR11A4FU01 709 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 C2CD4DB7Z1M9 353 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 LOC730098B7Z3J9 87 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 EXOC3O60645 756 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 MOSPD3O75425 235 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 ABLIM3O94929 683 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 OAZ2O95190 189 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 C4BPAP04003 597 aaKnown RBP7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 ADH1AP07327 375 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 DLATP10515 647 aaKnown RBP7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 ATF6P18850 670 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 TYMPP19971 482 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 NR2F2P24468 414 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 ACAT1P24752 427 aaKnown RBP7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 KLRC2P26717 231 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 OR1D2P34982 312 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 CCR2P41597 374 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 RAP1GAPP47736 663 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 GPR15P49685 360 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 TAF6P49848 677 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 MYL6P60660 151 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 BFSP1Q12934 665 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 CBX2Q14781 532 aaPredicted RBP7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 CAMK4Q16566 473 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 DPCR1Q3MIW9 517 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 ANKRD40Q6AI12 368 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 SPOPLQ6IQ16 392 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 RBM43Q6ZSC3 357 aaKnown RBP7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 HS2ST1Q7LGA3 356 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 GPR149Q86SP6 731 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 KREMEN2Q8NCW0 462 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 ST13P5Q8NFI4 369 aaPredicted RBP7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 SLC7A14Q8TBB6 771 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 SEMA4DQ92854 862 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 CCDC127Q96BQ5 260 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 PGLYRP2Q96PD5 576 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 GSDMAQ96QA5 445 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 MRPL45Q9BRJ2 306 aaKnown RBP7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 EMILIN2Q9BXX0 1053 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 DPEP3Q9H4B8 488 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 SMYD3Q9H7B4 428 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 SFXN1Q9H9B4 322 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 EVA1BQ9NVM1 165 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 DZANK1Q9NVP4 752 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 ITGA11Q9UKX5 1188 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 AGAP1Q9UPQ3 857 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 CTNND2Q9UQB3 1225 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms