RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 RPP25Q9BUL9 199 aaKnown RBP20.04■□□□□ 0.8
UBE3D-207ENST00000509102 CRISPLD1Q9H336 500 aa20.04■□□□□ 0.8
UBE3D-207ENST00000509102 DDX43Q9NXZ2 648 aaKnown RBP20.04■□□□□ 0.8
UBE3D-207ENST00000509102 L1RE1Q9UN81 338 aa20.04■□□□□ 0.8
UBE3D-207ENST00000509102 FAM237AA0A1B0GTK4 181 aa20.03■□□□□ 0.8
UBE3D-207ENST00000509102 GALR2O43603 387 aaPredicted RBP20.03■□□□□ 0.8
UBE3D-207ENST00000509102 KLRC4O43908 158 aa20.03■□□□□ 0.8
UBE3D-207ENST00000509102 VNN2O95498 520 aa20.03■□□□□ 0.8
UBE3D-207ENST00000509102 RPN1P04843 607 aaKnown RBP20.03■□□□□ 0.8
UBE3D-207ENST00000509102 GPC5P78333 572 aa20.03■□□□□ 0.8
UBE3D-207ENST00000509102 NHLH1Q02575 133 aa20.03■□□□□ 0.8
UBE3D-207ENST00000509102 STK4Q13043 487 aa20.03■□□□□ 0.8
UBE3D-207ENST00000509102 ARHGAP15Q53QZ3 475 aa20.03■□□□□ 0.8
UBE3D-207ENST00000509102 TMEM105Q8N8V8 129 aa20.03■□□□□ 0.8
UBE3D-207ENST00000509102 PRSS33Q8NF86 280 aa20.03■□□□□ 0.8
UBE3D-207ENST00000509102 OR5B17Q8NGF7 314 aa20.03■□□□□ 0.8
UBE3D-207ENST00000509102 SMARCD2Q92925 531 aa20.03■□□□□ 0.8
UBE3D-207ENST00000509102 CHAMP1Q96JM3 812 aa20.03■□□□□ 0.8
UBE3D-207ENST00000509102 SIX4Q9UIU6 781 aa20.03■□□□□ 0.8
UBE3D-207ENST00000509102 KMT2EQ8IZD2 1858 aa20.03■□□□□ 0.8
UBE3D-207ENST00000509102 KRBA1A5PL33 1030 aa20.02■□□□□ 0.8
UBE3D-207ENST00000509102 CLSTN1O94985 981 aa20.02■□□□□ 0.8
UBE3D-207ENST00000509102 CCR2P41597 374 aa20.02■□□□□ 0.8
UBE3D-207ENST00000509102 TRPC3Q13507 836 aa20.02■□□□□ 0.8
UBE3D-207ENST00000509102 FAM78AQ5JUQ0 283 aa20.02■□□□□ 0.8
UBE3D-207ENST00000509102 CWF19L1Q69YN2 538 aaKnown RBP20.02■□□□□ 0.8
UBE3D-207ENST00000509102 PHLDB3Q6NSJ2 640 aa20.02■□□□□ 0.8
UBE3D-207ENST00000509102 TRAPPC11Q7Z392 1133 aa20.02■□□□□ 0.8
UBE3D-207ENST00000509102 DNAJB7Q7Z6W7 309 aaPredicted RBP20.02■□□□□ 0.8
UBE3D-207ENST00000509102 KIAA0895Q8NCT3 520 aa20.02■□□□□ 0.8
UBE3D-207ENST00000509102 E2F7Q96AV8 911 aa20.02■□□□□ 0.8
UBE3D-207ENST00000509102 ASB16Q96NS5 453 aa20.02■□□□□ 0.8
UBE3D-207ENST00000509102 MMS19Q96T76 1030 aa20.02■□□□□ 0.8
UBE3D-207ENST00000509102 DNAJC25Q9H1X3 360 aa20.02■□□□□ 0.8
UBE3D-207ENST00000509102 TBC1D17Q9HA65 648 aa20.02■□□□□ 0.8
UBE3D-207ENST00000509102 NOTCH4Q99466 2003 aa20.02■□□□□ 0.79
UBE3D-207ENST00000509102 PTPRJQ12913 1337 aa20.02■□□□□ 0.79
UBE3D-207ENST00000509102 A0A1W2PRU2 124 aa20.01■□□□□ 0.79
UBE3D-207ENST00000509102 PHACTR2O75167 634 aa20.01■□□□□ 0.79
UBE3D-207ENST00000509102 NPR3P17342 541 aa20.01■□□□□ 0.79
UBE3D-207ENST00000509102 AP3M2P53677 418 aa20.01■□□□□ 0.79
UBE3D-207ENST00000509102 PRKCQQ04759 706 aa20.01■□□□□ 0.79
UBE3D-207ENST00000509102 TEAD2Q15562 447 aa20.01■□□□□ 0.79
UBE3D-207ENST00000509102 INTS6LQ5JSJ4 861 aaKnown RBP20.01■□□□□ 0.79
UBE3D-207ENST00000509102 KRBA2Q6ZNG9 492 aa20.01■□□□□ 0.79
UBE3D-207ENST00000509102 TTC9BQ8N6N2 239 aa20.01■□□□□ 0.79
UBE3D-207ENST00000509102 CXorf38Q8TB03 319 aa20.01■□□□□ 0.79
UBE3D-207ENST00000509102 ZSCAN18Q8TBC5 510 aaPredicted RBP20.01■□□□□ 0.79
UBE3D-207ENST00000509102 FAM84AQ96KN4 292 aa20.01■□□□□ 0.79
UBE3D-207ENST00000509102 ATXN3LQ9H3M9 355 aa20.01■□□□□ 0.79
UBE3D-207ENST00000509102 GDPD2Q9HCC8 539 aa20.01■□□□□ 0.79
UBE3D-207ENST00000509102 ABCB6Q9NP58 842 aa20.01■□□□□ 0.79
UBE3D-207ENST00000509102 WDFY4Q6ZS81 3184 aa20.01■□□□□ 0.79
UBE3D-207ENST00000509102 PDXKO00764 312 aa20■□□□□ 0.79
UBE3D-207ENST00000509102 CALUO43852 315 aaPredicted RBP20■□□□□ 0.79
UBE3D-207ENST00000509102 SOAT2O75908 522 aa20■□□□□ 0.79
UBE3D-207ENST00000509102 ZNF202O95125 648 aa20■□□□□ 0.79
UBE3D-207ENST00000509102 HAPLN1P10915 354 aaPredicted RBP20■□□□□ 0.79
UBE3D-207ENST00000509102 GJA1P17302 382 aa20■□□□□ 0.79
UBE3D-207ENST00000509102 GABRR2P28476 465 aa20■□□□□ 0.79
UBE3D-207ENST00000509102 CDC25CP30307 473 aa20■□□□□ 0.79
UBE3D-207ENST00000509102 RPL10AP62906 217 aaKnown RBP20■□□□□ 0.79
UBE3D-207ENST00000509102 TNNC1P63316 161 aa20■□□□□ 0.79
UBE3D-207ENST00000509102 MAPRE1Q15691 268 aaKnown RBP20■□□□□ 0.79
UBE3D-207ENST00000509102 TANGO2Q6ICL3 276 aa20■□□□□ 0.79
UBE3D-207ENST00000509102 LRRTM3Q86VH5 581 aa20■□□□□ 0.79
UBE3D-207ENST00000509102 TMC8Q8IU68 726 aa20■□□□□ 0.79
UBE3D-207ENST00000509102 SPATA2LQ8IUW3 424 aaPredicted RBP20■□□□□ 0.79
UBE3D-207ENST00000509102 SHKBP1Q8TBC3 707 aa20■□□□□ 0.79
UBE3D-207ENST00000509102 DEPDC1BQ8WUY9 529 aa20■□□□□ 0.79
UBE3D-207ENST00000509102 TRMT61BQ9BVS5 477 aaKnown RBP20■□□□□ 0.79
UBE3D-207ENST00000509102 BRD9Q9H8M2 597 aa20■□□□□ 0.79
UBE3D-207ENST00000509102 ZMYM5Q9UJ78 669 aa20■□□□□ 0.79
UBE3D-207ENST00000509102 FRMD4BQ9Y2L6 1034 aa20■□□□□ 0.79
UBE3D-207ENST00000509102 PSMC3P17980 439 aa19.99■□□□□ 0.79
UBE3D-207ENST00000509102 ACAT1P24752 427 aaKnown RBP19.99■□□□□ 0.79
UBE3D-207ENST00000509102 BIRC3Q13489 604 aa19.99■□□□□ 0.79
UBE3D-207ENST00000509102 SNW1Q13573 536 aaKnown RBP19.99■□□□□ 0.79
UBE3D-207ENST00000509102 MLF2Q15773 248 aaPredicted RBP19.99■□□□□ 0.79
UBE3D-207ENST00000509102 SOWAHAQ2M3V2 549 aa19.99■□□□□ 0.79
UBE3D-207ENST00000509102 SLC44A4Q53GD3 710 aa19.99■□□□□ 0.79
UBE3D-207ENST00000509102 C4orf50Q6ZRC1 276 aa19.99■□□□□ 0.79
UBE3D-207ENST00000509102 SLC9A9Q8IVB4 645 aa19.99■□□□□ 0.79
UBE3D-207ENST00000509102 YAF2Q8IY57 180 aa19.99■□□□□ 0.79
UBE3D-207ENST00000509102 ATOH1Q92858 354 aaPredicted RBP19.99■□□□□ 0.79
UBE3D-207ENST00000509102 DNASE1L2Q92874 299 aa19.99■□□□□ 0.79
UBE3D-207ENST00000509102 IRF7Q92985 503 aa19.99■□□□□ 0.79
UBE3D-207ENST00000509102 SYAP1Q96A49 352 aaPredicted RBP19.99■□□□□ 0.79
UBE3D-207ENST00000509102 LPIN3Q9BQK8 851 aa19.99■□□□□ 0.79
UBE3D-207ENST00000509102 PI4K2AQ9BTU6 479 aa19.99■□□□□ 0.79
UBE3D-207ENST00000509102 LRRC3Q9BY71 257 aa19.99■□□□□ 0.79
UBE3D-207ENST00000509102 SNX25Q9H3E2 840 aa19.99■□□□□ 0.79
UBE3D-207ENST00000509102 TRPV4Q9HBA0 871 aa19.99■□□□□ 0.79
UBE3D-207ENST00000509102 SIT1Q9Y3P8 196 aa19.99■□□□□ 0.79
UBE3D-207ENST00000509102 DPYSL4O14531 572 aa19.98■□□□□ 0.79
UBE3D-207ENST00000509102 GABRDO14764 452 aa19.98■□□□□ 0.79
UBE3D-207ENST00000509102 MOSPD3O75425 235 aa19.98■□□□□ 0.79
UBE3D-207ENST00000509102 RHOBTB3O94955 611 aa19.98■□□□□ 0.79
UBE3D-207ENST00000509102 NR3C1P04150 777 aa19.98■□□□□ 0.79
UBE3D-207ENST00000509102 CSH1P0DML2 217 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms