RNA–Protein interactions for RNA: ENST00000509023.5

SNCAIP-211, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 1,972 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-211ENST00000509023 BCL7CQ8WUZ0 217 aaPredicted RBP15.78■□□□□ 0.12
SNCAIP-211ENST00000509023 ZNF606Q8WXB4 792 aa15.78■□□□□ 0.12
SNCAIP-211ENST00000509023 TFAP2BQ92481 460 aa15.78■□□□□ 0.12
SNCAIP-211ENST00000509023 ZSWIM1Q9BR11 485 aa15.78■□□□□ 0.12
SNCAIP-211ENST00000509023 DDX43Q9NXZ2 648 aaKnown RBP15.78■□□□□ 0.12
SNCAIP-211ENST00000509023 INSL6Q9Y581 213 aa15.78■□□□□ 0.12
SNCAIP-211ENST00000509023 SF3B1O75533 1304 aaKnown RBP eCLIP15.78■□□□□ 0.12
SNCAIP-211ENST00000509023 ZNF263O14978 683 aa15.78■□□□□ 0.12
SNCAIP-211ENST00000509023 IPO7O95373 1038 aaKnown RBP15.78■□□□□ 0.12
SNCAIP-211ENST00000509023 LAG3P18627 525 aa15.78■□□□□ 0.12
SNCAIP-211ENST00000509023 TYMPP19971 482 aa15.78■□□□□ 0.12
SNCAIP-211ENST00000509023 ACAT1P24752 427 aaKnown RBP15.78■□□□□ 0.12
SNCAIP-211ENST00000509023 SSTR3P32745 418 aaPredicted RBP15.78■□□□□ 0.12
SNCAIP-211ENST00000509023 SPA17Q15506 151 aa15.78■□□□□ 0.12
SNCAIP-211ENST00000509023 FUT10Q6P4F1 479 aa15.78■□□□□ 0.12
SNCAIP-211ENST00000509023 KCNT2Q6UVM3 1135 aa15.78■□□□□ 0.12
SNCAIP-211ENST00000509023 PALB2Q86YC2 1186 aa15.78■□□□□ 0.12
SNCAIP-211ENST00000509023 SLC30A5Q8TAD4 765 aa15.78■□□□□ 0.12
SNCAIP-211ENST00000509023 KIAA1524Q8TCG1 905 aa15.78■□□□□ 0.12
SNCAIP-211ENST00000509023 ZNF558Q96NG5 402 aa15.78■□□□□ 0.12
SNCAIP-211ENST00000509023 GPR62Q9BZJ7 368 aa15.78■□□□□ 0.12
SNCAIP-211ENST00000509023 ADGRG1Q9Y653 693 aa15.78■□□□□ 0.12
SNCAIP-211ENST00000509023 LCA5LO95447 670 aa15.77■□□□□ 0.12
SNCAIP-211ENST00000509023 CFHP08603 1231 aa15.77■□□□□ 0.12
SNCAIP-211ENST00000509023 VDRP11473 427 aa15.77■□□□□ 0.12
SNCAIP-211ENST00000509023 TKTP29401 623 aaKnown RBP15.77■□□□□ 0.12
SNCAIP-211ENST00000509023 OVOS1Q6IE37 1185 aa15.77■□□□□ 0.12
SNCAIP-211ENST00000509023 ZSCAN30Q86W11 494 aa15.77■□□□□ 0.12
SNCAIP-211ENST00000509023 C12orf29Q8N999 325 aa15.77■□□□□ 0.12
SNCAIP-211ENST00000509023 SPATA18Q8TC71 538 aa15.77■□□□□ 0.12
SNCAIP-211ENST00000509023 TNIP3Q96KP6 325 aa15.77■□□□□ 0.12
SNCAIP-211ENST00000509023 PCDHB18PQ96TA0 734 aa15.77■□□□□ 0.12
SNCAIP-211ENST00000509023 RAD9AQ99638 391 aa15.77■□□□□ 0.12
SNCAIP-211ENST00000509023 PDCL3Q9H2J4 239 aa15.77■□□□□ 0.12
SNCAIP-211ENST00000509023 NAGPAQ9UK23 515 aa15.77■□□□□ 0.12
SNCAIP-211ENST00000509023 REXO2Q9Y3B8 237 aaKnown RBP15.77■□□□□ 0.12
SNCAIP-211ENST00000509023 MED7O43513 233 aa15.76■□□□□ 0.11
SNCAIP-211ENST00000509023 TLL1O43897 1013 aa15.76■□□□□ 0.11
SNCAIP-211ENST00000509023 CCDC175P0C221 793 aa15.76■□□□□ 0.11
SNCAIP-211ENST00000509023 PSMC1P62191 440 aaKnown RBP15.76■□□□□ 0.11
SNCAIP-211ENST00000509023 YWHAHQ04917 246 aaPredicted RBP15.76■□□□□ 0.11
SNCAIP-211ENST00000509023 ELAVL2Q12926 359 aaKnown RBP15.76■□□□□ 0.11
SNCAIP-211ENST00000509023 SGO2Q562F6 1265 aa15.76■□□□□ 0.11
SNCAIP-211ENST00000509023 FAM171A1Q5VUB5 890 aa15.76■□□□□ 0.11
SNCAIP-211ENST00000509023 CRYBG2Q8N1P7 616 aa15.76■□□□□ 0.11
SNCAIP-211ENST00000509023 FIBCD1Q8N539 461 aa15.76■□□□□ 0.11
SNCAIP-211ENST00000509023 COLGALT1Q8NBJ5 622 aa15.76■□□□□ 0.11
SNCAIP-211ENST00000509023 IGSF21Q96ID5 467 aa15.76■□□□□ 0.11
SNCAIP-211ENST00000509023 RNPC3Q96LT9 517 aaKnown RBP15.76■□□□□ 0.11
SNCAIP-211ENST00000509023 DNAI2Q9GZS0 605 aa15.76■□□□□ 0.11
SNCAIP-211ENST00000509023 KIAA1257Q9ULG3 409 aa15.76■□□□□ 0.11
SNCAIP-211ENST00000509023 KIAA1671Q9BY89 1806 aa15.76■□□□□ 0.11
SNCAIP-211ENST00000509023 FAM170AA1A519 330 aa15.76■□□□□ 0.11
SNCAIP-211ENST00000509023 SYN3O14994 580 aa15.76■□□□□ 0.11
SNCAIP-211ENST00000509023 KRT83P78385 493 aa15.76■□□□□ 0.11
SNCAIP-211ENST00000509023 SHHQ15465 462 aa15.76■□□□□ 0.11
SNCAIP-211ENST00000509023 CCDC122Q5T0U0 273 aa15.76■□□□□ 0.11
SNCAIP-211ENST00000509023 ALKBH5Q6P6C2 394 aaKnown RBP15.76■□□□□ 0.11
SNCAIP-211ENST00000509023 CEP57Q86XR8 500 aa15.76■□□□□ 0.11
SNCAIP-211ENST00000509023 PASD1Q8IV76 773 aa15.76■□□□□ 0.11
SNCAIP-211ENST00000509023 SLC39A11Q8N1S5 342 aa15.76■□□□□ 0.11
SNCAIP-211ENST00000509023 C17orf53Q8N3J3 647 aaPredicted RBP15.76■□□□□ 0.11
SNCAIP-211ENST00000509023 B3GALNT2Q8NCR0 500 aa15.76■□□□□ 0.11
SNCAIP-211ENST00000509023 LPIN3Q9BQK8 851 aa15.76■□□□□ 0.11
SNCAIP-211ENST00000509023 RTP3Q9BQQ7 232 aa15.76■□□□□ 0.11
SNCAIP-211ENST00000509023 FAM49BQ9NUQ9 324 aa15.76■□□□□ 0.11
SNCAIP-211ENST00000509023 NENFQ9UMX5 172 aa15.76■□□□□ 0.11
SNCAIP-211ENST00000509023 PPP2R2CQ9Y2T4 447 aa15.76■□□□□ 0.11
SNCAIP-211ENST00000509023 LAMA2P24043 3122 aaKnown RBP15.76■□□□□ 0.11
SNCAIP-211ENST00000509023 TMCO5BA8MYB1 307 aa15.75■□□□□ 0.11
SNCAIP-211ENST00000509023 ATP2C2O75185 946 aa15.75■□□□□ 0.11
SNCAIP-211ENST00000509023 PCSK1P29120 753 aa15.75■□□□□ 0.11
SNCAIP-211ENST00000509023 PPP1R26Q5T8A7 1209 aaPredicted RBP15.75■□□□□ 0.11
SNCAIP-211ENST00000509023 KIAA0319Q5VV43 1072 aa15.75■□□□□ 0.11
SNCAIP-211ENST00000509023 DNAAF5Q86Y56 855 aa15.75■□□□□ 0.11
SNCAIP-211ENST00000509023 THEM5Q8N1Q8 247 aa15.75■□□□□ 0.11
SNCAIP-211ENST00000509023 B3GALT6Q96L58 329 aa15.75■□□□□ 0.11
SNCAIP-211ENST00000509023 SYT15Q9BQS2 421 aa15.75■□□□□ 0.11
SNCAIP-211ENST00000509023 TRMT1Q9NXH9 659 aaKnown RBP15.75■□□□□ 0.11
SNCAIP-211ENST00000509023 TAS2R14Q9NYV8 317 aa15.75■□□□□ 0.11
SNCAIP-211ENST00000509023 CDH9Q9ULB4 789 aa15.75■□□□□ 0.11
SNCAIP-211ENST00000509023 PCDHGC3Q9UN70 934 aa15.75■□□□□ 0.11
SNCAIP-211ENST00000509023 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.75■□□□□ 0.11
SNCAIP-211ENST00000509023 PCDHA13Q9Y5I0 950 aa15.75■□□□□ 0.11
SNCAIP-211ENST00000509023 VWA8A3KMH1 1905 aa15.75■□□□□ 0.11
SNCAIP-211ENST00000509023 LCHNA4D1U4 455 aa15.75■□□□□ 0.11
SNCAIP-211ENST00000509023 CARNS1A5YM72 827 aa15.75■□□□□ 0.11
SNCAIP-211ENST00000509023 O00370 1275 aa15.75■□□□□ 0.11
SNCAIP-211ENST00000509023 LINC00271P0C7V0 271 aa15.75■□□□□ 0.11
SNCAIP-211ENST00000509023 PTPN1P18031 435 aaKnown RBP15.75■□□□□ 0.11
SNCAIP-211ENST00000509023 FGFR3P22607 806 aa15.75■□□□□ 0.11
SNCAIP-211ENST00000509023 MSNP26038 577 aaKnown RBP15.75■□□□□ 0.11
SNCAIP-211ENST00000509023 RABGGTBP53611 331 aa15.75■□□□□ 0.11
SNCAIP-211ENST00000509023 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.75■□□□□ 0.11
SNCAIP-211ENST00000509023 SP7Q8TDD2 431 aaPredicted RBP15.75■□□□□ 0.11
SNCAIP-211ENST00000509023 CYFIP2Q96F07 1278 aa15.75■□□□□ 0.11
SNCAIP-211ENST00000509023 TMEM169Q96HH4 297 aa15.75■□□□□ 0.11
SNCAIP-211ENST00000509023 ACBD6Q9BR61 282 aa15.75■□□□□ 0.11
SNCAIP-211ENST00000509023 AAASQ9NRG9 546 aa15.75■□□□□ 0.11
SNCAIP-211ENST00000509023 USP27XA6NNY8 438 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms