RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 PCDHGA2Q9Y5H1 932 aa6.97□□□□□ -1.29
HMGN1P16-201ENST00000508308 PIAS3Q9Y6X2 628 aa6.97□□□□□ -1.29
HMGN1P16-201ENST00000508308 CNOT1A5YKK6 2376 aaKnown RBP6.96□□□□□ -1.29
HMGN1P16-201ENST00000508308 KMT2BQ9UMN6 2715 aaPredicted RBP6.96□□□□□ -1.29
HMGN1P16-201ENST00000508308 ATG2BQ96BY7 2078 aa6.96□□□□□ -1.29
HMGN1P16-201ENST00000508308 MED19A0JLT2 244 aaPredicted RBP6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 MAN2B1O00754 1011 aa6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 ZNF263O14978 683 aa6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 CHADO15335 359 aa6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 WIPF1O43516 503 aa6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 KINO60870 393 aaKnown RBP6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 ODC1P11926 461 aa6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 HMGA1P17096 107 aaKnown RBP6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 CCNE1P24864 410 aa6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 CASP5P51878 434 aa6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 EPHB3P54753 998 aa6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 MLLT6P55198 1093 aaPredicted RBP6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 DMWDQ09019 674 aa6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 RESTQ13127 1097 aa6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 TMEM132DQ14C87 1099 aa6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 CCDC142Q17RM4 750 aa6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 SLC39A12Q504Y0 691 aa6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 WSCD1Q658N2 575 aa6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 ADALQ6DHV7 355 aa6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 ZC3H14Q6PJT7 736 aaKnown RBP6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 DYMQ7RTS9 669 aa6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 USP37Q86T82 979 aa6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 ARID3BQ8IVW6 561 aaPredicted RBP6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 CD302Q8IX05 232 aa6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 ELMOD1Q8N336 334 aa6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 RIN3Q8TB24 985 aa6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 DEPDC1BQ8WUY9 529 aa6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 FAM3CQ92520 227 aa6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 ZFYVE19Q96K21 471 aa6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 SLC46A2Q9BY10 475 aa6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 GPR88Q9GZN0 384 aa6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 SMG9Q9H0W8 520 aaKnown RBP6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 ZHX3Q9H4I2 956 aa6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 ASB7Q9H672 318 aa6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 LMAN1LQ9HAT1 526 aa6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 PARD6AQ9NPB6 346 aa6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 RBM12Q9NTZ6 932 aaKnown RBP6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 DPP3Q9NY33 737 aa6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 HSFX1Q9UBD0 423 aa6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 AGO2Q9UKV8 859 aaKnown RBP6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 MRPS17Q9Y2R5 130 aaKnown RBP6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 C2CD2Q9Y426 696 aa6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 SRPRBQ9Y5M8 271 aaKnown RBP6.96□□□□□ -1.3
HMGN1P16-201ENST00000508308 FRMD3A2A2Y4 597 aa6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 MYBPHLA2RUH7 354 aa6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 OTOL1A6NHN0 477 aaPredicted RBP6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 SLC38A8A6NNN8 435 aa6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 K7ESF4 209 aa6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 CYB561D2O14569 222 aa6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 NCAM2O15394 837 aa6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 XPOTO43592 962 aaKnown RBP6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 HCRTO43612 131 aa6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 TBCAO75347 108 aaKnown RBP6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 BMP15O95972 392 aa6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 KRT18P05783 430 aaKnown RBP6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 HAPLN1P10915 354 aaPredicted RBP6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 SYT1P21579 422 aa6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 GABRR2P28476 465 aa6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 WEE1P30291 646 aa6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 HOXD13P35453 343 aa6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 ALDH1A3P47895 512 aa6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 GPR15P49685 360 aa6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 MCM2P49736 904 aa6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 CYP4F8P98187 520 aa6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 SATB1Q01826 763 aa6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 POU5F1Q01860 360 aaKnown RBP6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 TNK2Q07912 1038 aa6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 PLD1Q13393 1074 aa6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 Q6ZS52 159 aa6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 C1orf127Q8N9H9 656 aa6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 STKLD1Q8NE28 680 aa6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 GLIS3Q8NEA6 775 aa6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 ANKK1Q8NFD2 765 aa6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 TTC8Q8TAM2 541 aa6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 ATRIPQ8WXE1 791 aa6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 SAAL1Q96ER3 474 aa6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 PKMYT1Q99640 499 aa6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 PYM1Q9BRP8 204 aaKnown RBP6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 PANK2Q9BZ23 570 aa6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 SLITRK6Q9H5Y7 841 aa6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 GTSE1Q9NYZ3 720 aa6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 TBC1D7Q9P0N9 293 aa6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 SMG5Q9UPR3 1016 aaKnown RBP6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 CCL26Q9Y258 94 aa6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 ASB3Q9Y575 518 aa6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 ANAPC1Q9H1A4 1944 aa6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 CEP295Q9C0D2 2601 aa6.95□□□□□ -1.3
HMGN1P16-201ENST00000508308 FRYQ5TBA9 3013 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 GREB1Q4ZG55 1949 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 VPS37CA5D8V6 355 aaPredicted RBP6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 KPNA7A9QM74 516 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 SPECC1L-ADORA2AF8WAN1 911 aa6.94□□□□□ -1.3
HMGN1P16-201ENST00000508308 TADA3O75528 432 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms