RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 CDH9Q9ULB4 789 aa16.06■□□□□ 0.16
RNF4-210ENST00000508235 C2orf16Q68DN1 1984 aa16.06■□□□□ 0.16
RNF4-210ENST00000508235 PMM2O15305 246 aa16.05■□□□□ 0.16
RNF4-210ENST00000508235 P4HA2O15460 535 aa16.05■□□□□ 0.16
RNF4-210ENST00000508235 LRG1P02750 347 aa16.05■□□□□ 0.16
RNF4-210ENST00000508235 OR4Q2P0C623 313 aa16.05■□□□□ 0.16
RNF4-210ENST00000508235 IL9P15248 144 aa16.05■□□□□ 0.16
RNF4-210ENST00000508235 TRIM21P19474 475 aaKnown RBP16.05■□□□□ 0.16
RNF4-210ENST00000508235 GNL1P36915 607 aaPredicted RBP16.05■□□□□ 0.16
RNF4-210ENST00000508235 NOP14P78316 857 aaKnown RBP16.05■□□□□ 0.16
RNF4-210ENST00000508235 PLD1Q13393 1074 aa16.05■□□□□ 0.16
RNF4-210ENST00000508235 NFE2Q16621 373 aaPredicted RBP16.05■□□□□ 0.16
RNF4-210ENST00000508235 SLC39A12Q504Y0 691 aa16.05■□□□□ 0.16
RNF4-210ENST00000508235 INTS6LQ5JSJ4 861 aaKnown RBP16.05■□□□□ 0.16
RNF4-210ENST00000508235 TRIM59Q8IWR1 403 aa16.05■□□□□ 0.16
RNF4-210ENST00000508235 SPPL2BQ8TCT7 592 aa16.05■□□□□ 0.16
RNF4-210ENST00000508235 KBTBD7Q8WVZ9 684 aa16.05■□□□□ 0.16
RNF4-210ENST00000508235 SMG7Q92540 1137 aaKnown RBP16.05■□□□□ 0.16
RNF4-210ENST00000508235 COQ4Q9Y3A0 265 aa16.05■□□□□ 0.16
RNF4-210ENST00000508235 INSL5Q9Y5Q6 135 aa16.05■□□□□ 0.16
RNF4-210ENST00000508235 TCF20Q9UGU0 1960 aaKnown RBP16.05■□□□□ 0.16
RNF4-210ENST00000508235 COL6A3P12111 3177 aa16.05■□□□□ 0.16
RNF4-210ENST00000508235 MTMR11A4FU01 709 aa16.04■□□□□ 0.16
RNF4-210ENST00000508235 RFPL2O75678 378 aa16.04■□□□□ 0.16
RNF4-210ENST00000508235 PRKCSHP14314 528 aaPredicted RBP16.04■□□□□ 0.16
RNF4-210ENST00000508235 FMO5P49326 533 aa16.04■□□□□ 0.16
RNF4-210ENST00000508235 TUFMP49411 452 aaKnown RBP16.04■□□□□ 0.16
RNF4-210ENST00000508235 CBWD6Q4V339 395 aa16.04■□□□□ 0.16
RNF4-210ENST00000508235 CBWD3Q5JTY5 395 aa16.04■□□□□ 0.16
RNF4-210ENST00000508235 CBWD5Q5RIA9 395 aa16.04■□□□□ 0.16
RNF4-210ENST00000508235 CREBRFQ8IUR6 639 aa16.04■□□□□ 0.16
RNF4-210ENST00000508235 ELMOD1Q8N336 334 aa16.04■□□□□ 0.16
RNF4-210ENST00000508235 TTC39CQ8N584 583 aa16.04■□□□□ 0.16
RNF4-210ENST00000508235 ENOX1Q8TC92 643 aaKnown RBP16.04■□□□□ 0.16
RNF4-210ENST00000508235 CNOT6LQ96LI5 555 aaKnown RBP16.04■□□□□ 0.16
RNF4-210ENST00000508235 PGLYRP2Q96PD5 576 aa16.04■□□□□ 0.16
RNF4-210ENST00000508235 MED15Q96RN5 788 aa16.04■□□□□ 0.16
RNF4-210ENST00000508235 TMEM209Q96SK2 561 aa16.04■□□□□ 0.16
RNF4-210ENST00000508235 PHF7Q9BWX1 381 aaPredicted RBP16.04■□□□□ 0.16
RNF4-210ENST00000508235 NIF3L1Q9GZT8 377 aa16.04■□□□□ 0.16
RNF4-210ENST00000508235 NAT10Q9H0A0 1025 aaKnown RBP16.04■□□□□ 0.16
RNF4-210ENST00000508235 FAM124BQ9H5Z6 455 aaPredicted RBP16.04■□□□□ 0.16
RNF4-210ENST00000508235 CYP3A43Q9HB55 503 aa16.04■□□□□ 0.16
RNF4-210ENST00000508235 POLIQ9UNA4 740 aa16.04■□□□□ 0.16
RNF4-210ENST00000508235 REV3LO60673 3130 aa16.03■□□□□ 0.16
RNF4-210ENST00000508235 SEC24AO95486 1093 aa16.03■□□□□ 0.16
RNF4-210ENST00000508235 ACAT1P24752 427 aaKnown RBP16.03■□□□□ 0.16
RNF4-210ENST00000508235 KCNH2Q12809 1159 aa16.03■□□□□ 0.16
RNF4-210ENST00000508235 C4orf50Q6ZRC1 276 aa16.03■□□□□ 0.16
RNF4-210ENST00000508235 OSTM1Q86WC4 334 aa16.03■□□□□ 0.16
RNF4-210ENST00000508235 ADHFE1Q8IWW8 467 aa16.03■□□□□ 0.16
RNF4-210ENST00000508235 ZNF707Q96C28 371 aaPredicted RBP16.03■□□□□ 0.16
RNF4-210ENST00000508235 SYT15Q9BQS2 421 aa16.03■□□□□ 0.16
RNF4-210ENST00000508235 MRPL45Q9BRJ2 306 aaKnown RBP16.03■□□□□ 0.16
RNF4-210ENST00000508235 PI4K2AQ9BTU6 479 aa16.03■□□□□ 0.16
RNF4-210ENST00000508235 BCO2Q9BYV7 579 aa16.03■□□□□ 0.16
RNF4-210ENST00000508235 ABCB6Q9NP58 842 aa16.03■□□□□ 0.16
RNF4-210ENST00000508235 PCDHB5Q9Y5E4 795 aa16.03■□□□□ 0.16
RNF4-210ENST00000508235 DENND4AQ7Z401 1863 aa16.02■□□□□ 0.16
RNF4-210ENST00000508235 A8MXQ7 604 aa16.02■□□□□ 0.16
RNF4-210ENST00000508235 CCL16O15467 120 aa16.02■□□□□ 0.16
RNF4-210ENST00000508235 AFPP02771 609 aaKnown RBP16.02■□□□□ 0.16
RNF4-210ENST00000508235 ASPAP45381 313 aa16.02■□□□□ 0.16
RNF4-210ENST00000508235 MTIF2P46199 727 aaKnown RBP16.02■□□□□ 0.16
RNF4-210ENST00000508235 ALDH1A3P47895 512 aa16.02■□□□□ 0.16
RNF4-210ENST00000508235 EPHB3P54753 998 aa16.02■□□□□ 0.16
RNF4-210ENST00000508235 TYRO3Q06418 890 aa16.02■□□□□ 0.16
RNF4-210ENST00000508235 DUSP4Q13115 394 aa16.02■□□□□ 0.16
RNF4-210ENST00000508235 IQCEQ6IPM2 695 aa16.02■□□□□ 0.16
RNF4-210ENST00000508235 SPOPLQ6IQ16 392 aa16.02■□□□□ 0.16
RNF4-210ENST00000508235 SCARA5Q6ZMJ2 495 aa16.02■□□□□ 0.16
RNF4-210ENST00000508235 LRRTM3Q86VH5 581 aa16.02■□□□□ 0.16
RNF4-210ENST00000508235 UNC93AQ86WB7 457 aa16.02■□□□□ 0.16
RNF4-210ENST00000508235 ATAD1Q8NBU5 361 aa16.02■□□□□ 0.16
RNF4-210ENST00000508235 ADAMTS19Q8TE59 1207 aa16.02■□□□□ 0.16
RNF4-210ENST00000508235 SEMA4DQ92854 862 aa16.02■□□□□ 0.16
RNF4-210ENST00000508235 FUBP3Q96I24 572 aaKnown RBP eCLIP16.02■□□□□ 0.16
RNF4-210ENST00000508235 TNIP3Q96KP6 325 aa16.02■□□□□ 0.16
RNF4-210ENST00000508235 SMYD3Q9H7B4 428 aa16.02■□□□□ 0.16
RNF4-210ENST00000508235 WDR6Q9NNW5 1121 aaKnown RBP16.02■□□□□ 0.16
RNF4-210ENST00000508235 ABI2Q9NYB9 513 aaPredicted RBP16.02■□□□□ 0.16
RNF4-210ENST00000508235 NR2E1Q9Y466 385 aa16.02■□□□□ 0.16
RNF4-210ENST00000508235 NFE2L3Q9Y4A8 694 aa16.02■□□□□ 0.16
RNF4-210ENST00000508235 EYSQ5T1H1 3165 aa16.01■□□□□ 0.15
RNF4-210ENST00000508235 PDGFRBP09619 1106 aa16.01■□□□□ 0.15
RNF4-210ENST00000508235 WEE2P0C1S8 567 aa16.01■□□□□ 0.15
RNF4-210ENST00000508235 LMO2P25791 158 aa16.01■□□□□ 0.15
RNF4-210ENST00000508235 YWHAEP62258 255 aaKnown RBP16.01■□□□□ 0.15
RNF4-210ENST00000508235 TWF1Q12792 350 aa16.01■□□□□ 0.15
RNF4-210ENST00000508235 VEPH1Q14D04 833 aa16.01■□□□□ 0.15
RNF4-210ENST00000508235 MGAT5BQ3V5L5 792 aa16.01■□□□□ 0.15
RNF4-210ENST00000508235 CFAP221Q4G0U5 840 aa16.01■□□□□ 0.15
RNF4-210ENST00000508235 FAM171BQ6P995 826 aa16.01■□□□□ 0.15
RNF4-210ENST00000508235 SPATA2LQ8IUW3 424 aaPredicted RBP16.01■□□□□ 0.15
RNF4-210ENST00000508235 ZNF512Q96ME7 567 aaPredicted RBP16.01■□□□□ 0.15
RNF4-210ENST00000508235 PKMYT1Q99640 499 aa16.01■□□□□ 0.15
RNF4-210ENST00000508235 SEPT5Q99719 369 aaPredicted RBP16.01■□□□□ 0.15
RNF4-210ENST00000508235 POMKQ9H5K3 350 aa16.01■□□□□ 0.15
RNF4-210ENST00000508235 APOBEC3GQ9HC16 384 aaKnown RBP16.01■□□□□ 0.15
RNF4-210ENST00000508235 GTF3C4Q9UKN8 822 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms