RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 AGAP1Q9UPQ3 857 aa15.53■□□□□ 0.08
HMGCS1-203ENST00000507004 F5P12259 2224 aa15.53■□□□□ 0.08
HMGCS1-203ENST00000507004 WDFY4Q6ZS81 3184 aa15.53■□□□□ 0.08
HMGCS1-203ENST00000507004 SCN1AP35498 2009 aa15.53■□□□□ 0.08
HMGCS1-203ENST00000507004 A0A087X0B3 334 aa15.52■□□□□ 0.08
HMGCS1-203ENST00000507004 KINO60870 393 aaKnown RBP15.52■□□□□ 0.08
HMGCS1-203ENST00000507004 PRPF40AO75400 957 aaKnown RBP15.52■□□□□ 0.08
HMGCS1-203ENST00000507004 PRPF6O94906 941 aaKnown RBP15.52■□□□□ 0.08
HMGCS1-203ENST00000507004 TNNC2P02585 160 aa15.52■□□□□ 0.08
HMGCS1-203ENST00000507004 ITGB3P05106 788 aa15.52■□□□□ 0.08
HMGCS1-203ENST00000507004 CSH1P0DML2 217 aa15.52■□□□□ 0.08
HMGCS1-203ENST00000507004 CSH2P0DML3 217 aa15.52■□□□□ 0.08
HMGCS1-203ENST00000507004 ZSCAN22P10073 491 aaPredicted RBP15.52■□□□□ 0.08
HMGCS1-203ENST00000507004 HAPLN1P10915 354 aaPredicted RBP15.52■□□□□ 0.08
HMGCS1-203ENST00000507004 TARSP26639 723 aaKnown RBP15.52■□□□□ 0.08
HMGCS1-203ENST00000507004 CASP5P51878 434 aa15.52■□□□□ 0.08
HMGCS1-203ENST00000507004 RPL10AP62906 217 aaKnown RBP15.52■□□□□ 0.08
HMGCS1-203ENST00000507004 ASIC1P78348 528 aa15.52■□□□□ 0.08
HMGCS1-203ENST00000507004 GRM2Q14416 872 aa15.52■□□□□ 0.08
HMGCS1-203ENST00000507004 DUOXA2Q1HG44 320 aa15.52■□□□□ 0.08
HMGCS1-203ENST00000507004 HS2ST1Q7LGA3 356 aa15.52■□□□□ 0.08
HMGCS1-203ENST00000507004 CSGALNACT2Q8N6G5 542 aa15.52■□□□□ 0.08
HMGCS1-203ENST00000507004 C1orf127Q8N9H9 656 aa15.52■□□□□ 0.08
HMGCS1-203ENST00000507004 FAM3CQ92520 227 aa15.52■□□□□ 0.08
HMGCS1-203ENST00000507004 CEP295NLQ96MC4 621 aa15.52■□□□□ 0.08
HMGCS1-203ENST00000507004 ZSWIM3Q96MP5 696 aa15.52■□□□□ 0.08
HMGCS1-203ENST00000507004 C7orf25Q9BPX7 421 aa15.52■□□□□ 0.08
HMGCS1-203ENST00000507004 CBWD1Q9BRT8 395 aa15.52■□□□□ 0.08
HMGCS1-203ENST00000507004 THG1LQ9NWX6 298 aaKnown RBP15.52■□□□□ 0.08
HMGCS1-203ENST00000507004 UXTQ9UBK9 157 aaPredicted RBP15.52■□□□□ 0.08
HMGCS1-203ENST00000507004 PCDHGA2Q9Y5H1 932 aa15.52■□□□□ 0.08
HMGCS1-203ENST00000507004 ZFHX2Q9C0A1 2572 aaPredicted RBP15.51■□□□□ 0.07
HMGCS1-203ENST00000507004 PVALEFA0A1B0GWK0 134 aa15.51■□□□□ 0.07
HMGCS1-203ENST00000507004 F13A1P00488 732 aa15.51■□□□□ 0.07
HMGCS1-203ENST00000507004 FAM163BP0C2L3 166 aa15.51■□□□□ 0.07
HMGCS1-203ENST00000507004 GJA1P17302 382 aa15.51■□□□□ 0.07
HMGCS1-203ENST00000507004 NRLP54845 237 aa15.51■□□□□ 0.07
HMGCS1-203ENST00000507004 LRRC32Q14392 662 aa15.51■□□□□ 0.07
HMGCS1-203ENST00000507004 MAPRE1Q15691 268 aaKnown RBP15.51■□□□□ 0.07
HMGCS1-203ENST00000507004 FAM26FQ5R3K3 315 aa15.51■□□□□ 0.07
HMGCS1-203ENST00000507004 GPR158Q5T848 1215 aa15.51■□□□□ 0.07
HMGCS1-203ENST00000507004 UNC13DQ70J99 1090 aa15.51■□□□□ 0.07
HMGCS1-203ENST00000507004 GAREM2Q75VX8 874 aa15.51■□□□□ 0.07
HMGCS1-203ENST00000507004 WDR49Q8IV35 697 aa15.51■□□□□ 0.07
HMGCS1-203ENST00000507004 ARID3BQ8IVW6 561 aaPredicted RBP15.51■□□□□ 0.07
HMGCS1-203ENST00000507004 ADSSL1Q8N142 457 aa15.51■□□□□ 0.07
HMGCS1-203ENST00000507004 ZNF507Q8TCN5 953 aa15.51■□□□□ 0.07
HMGCS1-203ENST00000507004 DHX58Q96C10 678 aa15.51■□□□□ 0.07
HMGCS1-203ENST00000507004 FUBP3Q96I24 572 aaKnown RBP eCLIP15.51■□□□□ 0.07
HMGCS1-203ENST00000507004 TMEM209Q96SK2 561 aa15.51■□□□□ 0.07
HMGCS1-203ENST00000507004 KIF9Q9HAQ2 790 aa15.51■□□□□ 0.07
HMGCS1-203ENST00000507004 INTS13Q9NVM9 706 aa15.51■□□□□ 0.07
HMGCS1-203ENST00000507004 ABI2Q9NYB9 513 aaPredicted RBP15.51■□□□□ 0.07
HMGCS1-203ENST00000507004 TFIP11Q9UBB9 837 aaKnown RBP15.51■□□□□ 0.07
HMGCS1-203ENST00000507004 PIAS3Q9Y6X2 628 aa15.51■□□□□ 0.07
HMGCS1-203ENST00000507004 CACNA1IQ9P0X4 2223 aa15.51■□□□□ 0.07
HMGCS1-203ENST00000507004 TCHHQ07283 1943 aa15.51■□□□□ 0.07
HMGCS1-203ENST00000507004 KRT19P08727 400 aa15.5■□□□□ 0.07
HMGCS1-203ENST00000507004 VIPR2P41587 438 aa15.5■□□□□ 0.07
HMGCS1-203ENST00000507004 FOXK2Q01167 660 aa15.5■□□□□ 0.07
HMGCS1-203ENST00000507004 BFSP1Q12934 665 aa15.5■□□□□ 0.07
HMGCS1-203ENST00000507004 INTS6LQ5JSJ4 861 aaKnown RBP15.5■□□□□ 0.07
HMGCS1-203ENST00000507004 POTEHQ6S545 545 aa15.5■□□□□ 0.07
HMGCS1-203ENST00000507004 RALGPS2Q86X27 583 aaPredicted RBP15.5■□□□□ 0.07
HMGCS1-203ENST00000507004 TMEM130Q8N3G9 435 aa15.5■□□□□ 0.07
HMGCS1-203ENST00000507004 PDCL2Q8N4E4 241 aa15.5■□□□□ 0.07
HMGCS1-203ENST00000507004 CELF5Q8N6W0 485 aaKnown RBP15.5■□□□□ 0.07
HMGCS1-203ENST00000507004 GOLGA5Q8TBA6 731 aa15.5■□□□□ 0.07
HMGCS1-203ENST00000507004 BPIFB1Q8TDL5 484 aa15.5■□□□□ 0.07
HMGCS1-203ENST00000507004 ATRIPQ8WXE1 791 aa15.5■□□□□ 0.07
HMGCS1-203ENST00000507004 EXOC4Q96A65 974 aa15.5■□□□□ 0.07
HMGCS1-203ENST00000507004 CHRDQ9H2X0 955 aa15.5■□□□□ 0.07
HMGCS1-203ENST00000507004 PDE11AQ9HCR9 933 aa15.5■□□□□ 0.07
HMGCS1-203ENST00000507004 ZSCAN32Q9NX65 697 aa15.5■□□□□ 0.07
HMGCS1-203ENST00000507004 DDX43Q9NXZ2 648 aaKnown RBP15.5■□□□□ 0.07
HMGCS1-203ENST00000507004 TSC2P49815 1807 aa15.5■□□□□ 0.07
HMGCS1-203ENST00000507004 GOLGA8IPA6NC78 632 aa15.49■□□□□ 0.07
HMGCS1-203ENST00000507004 GOLGA8JA6NMD2 632 aa15.49■□□□□ 0.07
HMGCS1-203ENST00000507004 TULP1O00294 542 aaPredicted RBP15.49■□□□□ 0.07
HMGCS1-203ENST00000507004 ATF6P18850 670 aa15.49■□□□□ 0.07
HMGCS1-203ENST00000507004 ME1P48163 572 aa15.49■□□□□ 0.07
HMGCS1-203ENST00000507004 CCR3P51677 355 aa15.49■□□□□ 0.07
HMGCS1-203ENST00000507004 KPNA1P52294 538 aaPredicted RBP15.49■□□□□ 0.07
HMGCS1-203ENST00000507004 AMPD2Q01433 879 aa15.49■□□□□ 0.07
HMGCS1-203ENST00000507004 CFAP221Q4G0U5 840 aa15.49■□□□□ 0.07
HMGCS1-203ENST00000507004 DGKKQ5KSL6 1271 aa15.49■□□□□ 0.07
HMGCS1-203ENST00000507004 SHC4Q6S5L8 630 aa15.49■□□□□ 0.07
HMGCS1-203ENST00000507004 C4orf50Q6ZRC1 276 aa15.49■□□□□ 0.07
HMGCS1-203ENST00000507004 EPM2AIP1Q7L775 607 aaPredicted RBP15.49■□□□□ 0.07
HMGCS1-203ENST00000507004 LRRTM3Q86VH5 581 aa15.49■□□□□ 0.07
HMGCS1-203ENST00000507004 GPR161Q8N6U8 529 aaKnown RBP15.49■□□□□ 0.07
HMGCS1-203ENST00000507004 NOC3LQ8WTT2 800 aaKnown RBP15.49■□□□□ 0.07
HMGCS1-203ENST00000507004 MRPS31Q92665 395 aaKnown RBP15.49■□□□□ 0.07
HMGCS1-203ENST00000507004 SECISBP2LQ93073 1101 aaKnown RBP15.49■□□□□ 0.07
HMGCS1-203ENST00000507004 FNBP1Q96RU3 617 aa15.49■□□□□ 0.07
HMGCS1-203ENST00000507004 IKZF4Q9H2S9 585 aa15.49■□□□□ 0.07
HMGCS1-203ENST00000507004 PCIF1Q9H4Z3 704 aa15.49■□□□□ 0.07
HMGCS1-203ENST00000507004 PRMT8Q9NR22 394 aaPredicted RBP15.49■□□□□ 0.07
HMGCS1-203ENST00000507004 HSPBP1Q9NZL4 362 aa15.49■□□□□ 0.07
HMGCS1-203ENST00000507004 EHD2Q9NZN4 543 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms