RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 CCDC150Q8NCX0 1101 aa20.71■□□□□ 0.91
LMNA-221ENST00000506981 SPPL2BQ8TCT7 592 aa20.71■□□□□ 0.91
LMNA-221ENST00000506981 CEP63Q96MT8 703 aa20.71■□□□□ 0.91
LMNA-221ENST00000506981 SNX25Q9H3E2 840 aa20.71■□□□□ 0.91
LMNA-221ENST00000506981 YIPF1Q9Y548 306 aa20.71■□□□□ 0.91
LMNA-221ENST00000506981 C2CD4DB7Z1M9 353 aa20.7■□□□□ 0.9
LMNA-221ENST00000506981 WARSP23381 471 aaKnown RBP20.7■□□□□ 0.9
LMNA-221ENST00000506981 FSHRP23945 695 aa20.7■□□□□ 0.9
LMNA-221ENST00000506981 ACAT1P24752 427 aaKnown RBP20.7■□□□□ 0.9
LMNA-221ENST00000506981 GTF2H1P32780 548 aa20.7■□□□□ 0.9
LMNA-221ENST00000506981 GCLMP48507 274 aa20.7■□□□□ 0.9
LMNA-221ENST00000506981 SGSM1Q2NKQ1 1148 aa20.7■□□□□ 0.9
LMNA-221ENST00000506981 CCDC40Q4G0X9 1142 aa20.7■□□□□ 0.9
LMNA-221ENST00000506981 PABPC1LQ4VXU2 614 aaKnown RBP20.7■□□□□ 0.9
LMNA-221ENST00000506981 INTS6LQ5JSJ4 861 aaKnown RBP20.7■□□□□ 0.9
LMNA-221ENST00000506981 FOXR2Q6PJQ5 311 aa20.7■□□□□ 0.9
LMNA-221ENST00000506981 RNF135Q8IUD6 432 aa20.7■□□□□ 0.9
LMNA-221ENST00000506981 TAF4BQ92750 862 aa20.7■□□□□ 0.9
LMNA-221ENST00000506981 ZNF512Q96ME7 567 aaPredicted RBP20.7■□□□□ 0.9
LMNA-221ENST00000506981 VRTNQ9H8Y1 702 aa20.7■□□□□ 0.9
LMNA-221ENST00000506981 METTL14Q9HCE5 456 aaKnown RBP20.7■□□□□ 0.9
LMNA-221ENST00000506981 TMEM8AQ9HCN3 771 aa20.7■□□□□ 0.9
LMNA-221ENST00000506981 ABI2Q9NYB9 513 aaPredicted RBP20.7■□□□□ 0.9
LMNA-221ENST00000506981 HSFX1Q9UBD0 423 aa20.7■□□□□ 0.9
LMNA-221ENST00000506981 ARMCX3Q9UH62 379 aaPredicted RBP20.7■□□□□ 0.9
LMNA-221ENST00000506981 PCDHB5Q9Y5E4 795 aa20.7■□□□□ 0.9
LMNA-221ENST00000506981 DENND4CQ5VZ89 1909 aa20.69■□□□□ 0.9
LMNA-221ENST00000506981 ZNF638Q14966 1978 aaKnown RBP20.69■□□□□ 0.9
LMNA-221ENST00000506981 GABRDO14764 452 aa20.69■□□□□ 0.9
LMNA-221ENST00000506981 TACC1O75410 805 aa20.69■□□□□ 0.9
LMNA-221ENST00000506981 VNN1O95497 513 aa20.69■□□□□ 0.9
LMNA-221ENST00000506981 FGFR1OPO95684 399 aaKnown RBP20.69■□□□□ 0.9
LMNA-221ENST00000506981 HLA-DRAP01903 254 aa20.69■□□□□ 0.9
LMNA-221ENST00000506981 PTPN2P17706 415 aa20.69■□□□□ 0.9
LMNA-221ENST00000506981 TUFMP49411 452 aaKnown RBP20.69■□□□□ 0.9
LMNA-221ENST00000506981 MXI1P50539 228 aa20.69■□□□□ 0.9
LMNA-221ENST00000506981 EPHB3P54753 998 aa20.69■□□□□ 0.9
LMNA-221ENST00000506981 STX17P56962 302 aa20.69■□□□□ 0.9
LMNA-221ENST00000506981 MGAT5BQ3V5L5 792 aa20.69■□□□□ 0.9
LMNA-221ENST00000506981 C1orf220Q5T0J3 134 aa20.69■□□□□ 0.9
LMNA-221ENST00000506981 KRT39Q6A163 491 aa20.69■□□□□ 0.9
LMNA-221ENST00000506981 OSTM1Q86WC4 334 aa20.69■□□□□ 0.9
LMNA-221ENST00000506981 ATAD1Q8NBU5 361 aa20.69■□□□□ 0.9
LMNA-221ENST00000506981 OR6B3Q8NGW1 331 aa20.69■□□□□ 0.9
LMNA-221ENST00000506981 SEPT5Q99719 369 aaPredicted RBP20.69■□□□□ 0.9
LMNA-221ENST00000506981 SYT15Q9BQS2 421 aa20.69■□□□□ 0.9
LMNA-221ENST00000506981 XYLT2Q9H1B5 865 aa20.69■□□□□ 0.9
LMNA-221ENST00000506981 CDH9Q9ULB4 789 aa20.69■□□□□ 0.9
LMNA-221ENST00000506981 SLC27A5Q9Y2P5 690 aa20.69■□□□□ 0.9
LMNA-221ENST00000506981 FAM163BP0C2L3 166 aa20.68■□□□□ 0.9
LMNA-221ENST00000506981 NTHL1P78549 312 aa20.68■□□□□ 0.9
LMNA-221ENST00000506981 PPP3CAQ08209 521 aa20.68■□□□□ 0.9
LMNA-221ENST00000506981 TTI2Q6NXR4 508 aa20.68■□□□□ 0.9
LMNA-221ENST00000506981 LIMS2Q7Z4I7 341 aa20.68■□□□□ 0.9
LMNA-221ENST00000506981 FILIP1Q7Z7B0 1213 aa20.68■□□□□ 0.9
LMNA-221ENST00000506981 ZDHHC14Q8IZN3 488 aa20.68■□□□□ 0.9
LMNA-221ENST00000506981 KBTBD7Q8WVZ9 684 aa20.68■□□□□ 0.9
LMNA-221ENST00000506981 CORO1BQ9BR76 489 aa20.68■□□□□ 0.9
LMNA-221ENST00000506981 HCFC1R1Q9NWW0 138 aa20.68■□□□□ 0.9
LMNA-221ENST00000506981 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.68■□□□□ 0.9
LMNA-221ENST00000506981 DNMT3BQ9UBC3 853 aaKnown RBP20.68■□□□□ 0.9
LMNA-221ENST00000506981 VNN2O95498 520 aa20.67■□□□□ 0.9
LMNA-221ENST00000506981 MBD3O95983 291 aa20.67■□□□□ 0.9
LMNA-221ENST00000506981 RHOP08100 348 aa20.67■□□□□ 0.9
LMNA-221ENST00000506981 ALADP13716 330 aa20.67■□□□□ 0.9
LMNA-221ENST00000506981 GNL1P36915 607 aaPredicted RBP20.67■□□□□ 0.9
LMNA-221ENST00000506981 VEPH1Q14D04 833 aa20.67■□□□□ 0.9
LMNA-221ENST00000506981 MAPRE1Q15691 268 aaKnown RBP20.67■□□□□ 0.9
LMNA-221ENST00000506981 CYP4A22Q5TCH4 519 aa20.67■□□□□ 0.9
LMNA-221ENST00000506981 SCARA5Q6ZMJ2 495 aa20.67■□□□□ 0.9
LMNA-221ENST00000506981 PDZD4Q76G19 769 aaPredicted RBP20.67■□□□□ 0.9
LMNA-221ENST00000506981 FRMD5Q7Z6J6 570 aa20.67■□□□□ 0.9
LMNA-221ENST00000506981 ITIH5Q86UX2 942 aa20.67■□□□□ 0.9
LMNA-221ENST00000506981 LRRTM3Q86VH5 581 aa20.67■□□□□ 0.9
LMNA-221ENST00000506981 SPATA2LQ8IUW3 424 aaPredicted RBP20.67■□□□□ 0.9
LMNA-221ENST00000506981 MLKLQ8NB16 471 aa20.67■□□□□ 0.9
LMNA-221ENST00000506981 LEMD2Q8NC56 503 aa20.67■□□□□ 0.9
LMNA-221ENST00000506981 FAM200AQ8TCP9 573 aa20.67■□□□□ 0.9
LMNA-221ENST00000506981 DUSP9Q99956 384 aaKnown RBP20.67■□□□□ 0.9
LMNA-221ENST00000506981 MRPL45Q9BRJ2 306 aaKnown RBP20.67■□□□□ 0.9
LMNA-221ENST00000506981 CRISPLD1Q9H336 500 aa20.67■□□□□ 0.9
LMNA-221ENST00000506981 ASAH2Q9NR71 780 aa20.67■□□□□ 0.9
LMNA-221ENST00000506981 DACH1Q9UI36 760 aa20.67■□□□□ 0.9
LMNA-221ENST00000506981 MRPS23Q9Y3D9 190 aaKnown RBP20.67■□□□□ 0.9
LMNA-221ENST00000506981 ZFP37Q9Y6Q3 630 aaPredicted RBP20.67■□□□□ 0.9
LMNA-221ENST00000506981 OBSL1O75147 1896 aa20.67■□□□□ 0.9
LMNA-221ENST00000506981 GREB1Q4ZG55 1949 aa20.66■□□□□ 0.9
LMNA-221ENST00000506981 VCANP13611 3396 aa20.66■□□□□ 0.9
LMNA-221ENST00000506981 DCXO43602 365 aa20.66■□□□□ 0.9
LMNA-221ENST00000506981 GNA14O95837 355 aa20.66■□□□□ 0.9
LMNA-221ENST00000506981 ASS1P00966 412 aaKnown RBP20.66■□□□□ 0.9
LMNA-221ENST00000506981 PDGFRBP09619 1106 aa20.66■□□□□ 0.9
LMNA-221ENST00000506981 TAF12Q16514 161 aa20.66■□□□□ 0.9
LMNA-221ENST00000506981 C4orf50Q6ZRC1 276 aa20.66■□□□□ 0.9
LMNA-221ENST00000506981 TTC9BQ8N6N2 239 aa20.66■□□□□ 0.9
LMNA-221ENST00000506981 TAS1R2Q8TE23 839 aa20.66■□□□□ 0.9
LMNA-221ENST00000506981 SMYD3Q9H7B4 428 aa20.66■□□□□ 0.9
LMNA-221ENST00000506981 MUTYHQ9UIF7 546 aa20.66■□□□□ 0.9
LMNA-221ENST00000506981 RWDD2AQ9UIY3 292 aa20.66■□□□□ 0.9
LMNA-221ENST00000506981 GTF3C4Q9UKN8 822 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms