RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 TMEM120AQ9BXJ8 343 aa3.8□□□□□ -1.8
TRAPPC11-205ENST00000506426 MS4A7Q9GZW8 240 aaPredicted RBP3.8□□□□□ -1.8
TRAPPC11-205ENST00000506426 C12orf65Q9H3J6 166 aaKnown RBP3.8□□□□□ -1.8
TRAPPC11-205ENST00000506426 MSL2Q9HCI7 577 aa3.8□□□□□ -1.8
TRAPPC11-205ENST00000506426 USP40Q9NVE5 1235 aa3.8□□□□□ -1.8
TRAPPC11-205ENST00000506426 ZSCAN32Q9NX65 697 aa3.8□□□□□ -1.8
TRAPPC11-205ENST00000506426 DACT1Q9NYF0 836 aa3.8□□□□□ -1.8
TRAPPC11-205ENST00000506426 XPR1Q9UBH6 696 aa3.8□□□□□ -1.8
TRAPPC11-205ENST00000506426 HDAC9Q9UKV0 1011 aa3.8□□□□□ -1.8
TRAPPC11-205ENST00000506426 SLC45A2Q9UMX9 530 aa3.8□□□□□ -1.8
TRAPPC11-205ENST00000506426 SLC4A7Q9Y6M7 1214 aa3.8□□□□□ -1.8
TRAPPC11-205ENST00000506426 TSPOAP1O95153 1857 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 UACAQ9BZF9 1416 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 PNPLA7Q6ZV29 1317 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 PPRC1Q5VV67 1664 aaKnown RBP3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 A0A1B0GTL3 188 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 TCAF2A6NFQ2 919 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 MROH6A6NGR9 719 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 TMEM233B4DJY2 109 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 M0QYG6 137 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 M0R3H8 397 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 SYT5O00445 386 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 FFAR3O14843 346 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 NPC1O15118 1278 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 B4GALT4O60513 344 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 AGFG2O95081 481 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 KRT1P04264 644 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 CYP2C9P11712 490 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 IL1R1P14778 569 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 IL1R2P27930 398 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 SERPINF1P36955 418 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 COPAP53621 1224 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 ITGA8P53708 1063 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 ARL4CP56559 192 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 RAC3P60763 192 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 FSTL1Q12841 308 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 RAB30Q15771 203 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 CRB2Q5IJ48 1285 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 FKBP15Q5T1M5 1219 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 ATXN7L2Q5T6C5 722 aaPredicted RBP3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 FAM160B1Q5W0V3 765 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 ANKS6Q68DC2 871 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 EFCAB12Q6NXP0 572 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 FAM111BQ6SJ93 734 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 ATG14Q6ZNE5 492 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 RFX8Q6ZV50 586 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 DOK3Q7L591 496 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 FAM83AQ86UY5 434 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 ZNF761Q86XN6 746 aaPredicted RBP3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 ADGRG2Q8IZP9 1017 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 CLASRPQ8N2M8 674 aaKnown RBP3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 SLC17A8Q8NDX2 589 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 CFHR4Q92496 578 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 TFAP2CQ92754 450 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 C18orf8Q96DM3 657 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 SNX27Q96L92 541 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 MOGAT1Q96PD6 335 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 GDF15Q99988 308 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 TINAGL1Q9GZM7 467 aaPredicted RBP3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 MAGEH1Q9H213 219 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 NECTIN3Q9NQS3 549 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 FBXO34Q9NWN3 711 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 SAGE1Q9NXZ1 904 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 GRHPRQ9UBQ7 328 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 AGAP1Q9UPQ3 857 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 CLCA2Q9UQC9 943 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 LRRFIP2Q9Y608 721 aaKnown RBP3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 KIAA0556O60303 1618 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 EPRSP07814 1512 aaKnown RBP3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 PLB1Q6P1J6 1458 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 KAT6BQ8WYB5 2073 aa3.79□□□□□ -1.8
TRAPPC11-205ENST00000506426 FAM234BA2RU67 622 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 CDHR4A6H8M9 788 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 PRR5-ARHGAP8B1AHC4 643 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 ACKR2O00590 384 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 IRAK2O43187 625 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 STC2O76061 302 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 NDST3O95803 873 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 A1BGP04217 495 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 C1QTNF9P0C862 333 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 PIM1P11309 404 aaPredicted RBP3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 BTF3P20290 206 aaKnown RBP3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 WNT3P56703 355 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 SLC29A2Q14542 456 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 POSTNQ15063 836 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 MAPRE1Q15691 268 aaKnown RBP3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 FAM214AQ32MH5 1076 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 KRTAP19-4Q3LI73 84 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 JAKMIP3Q5VZ66 844 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 ARL6IP4Q66PJ3 421 aaKnown RBP3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 MFSD5Q6N075 450 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 LVRNQ6Q4G3 990 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 USP17L6PQ6QN14 398 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 CYP26C1Q6V0L0 522 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 TTLL10Q6ZVT0 673 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 KRT28Q7Z3Y7 464 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 XYLT1Q86Y38 959 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 GALNT15Q8N3T1 639 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 GLIS1Q8NBF1 620 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 FAM46DQ8NEK8 389 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms