RNA–Protein interactions for RNA: ENST00000505555.5

SDHA-206, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,230 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-206ENST00000505555 PACS2Q86VP3 889 aa20.62■□□□□ 0.89
SDHA-206ENST00000505555 XPO6Q96QU8 1125 aaKnown RBP20.62■□□□□ 0.89
SDHA-206ENST00000505555 ZNF518BQ9C0D4 1074 aa20.62■□□□□ 0.89
SDHA-206ENST00000505555 HMGXB4Q9UGU5 601 aa20.62■□□□□ 0.89
SDHA-206ENST00000505555 DDX20Q9UHI6 824 aaKnown RBP20.62■□□□□ 0.89
SDHA-206ENST00000505555 VTNP04004 478 aa20.62■□□□□ 0.89
SDHA-206ENST00000505555 ETS1P14921 441 aa20.62■□□□□ 0.89
SDHA-206ENST00000505555 RFC1P35251 1148 aaPredicted RBP20.62■□□□□ 0.89
SDHA-206ENST00000505555 ERMARDQ5T6L9 678 aa20.62■□□□□ 0.89
SDHA-206ENST00000505555 IZUMO3Q5VZ72 239 aa20.62■□□□□ 0.89
SDHA-206ENST00000505555 JADE1Q6IE81 842 aa20.62■□□□□ 0.89
SDHA-206ENST00000505555 SMYD3Q9H7B4 428 aa20.62■□□□□ 0.89
SDHA-206ENST00000505555 EVPLQ92817 2033 aa20.61■□□□□ 0.89
SDHA-206ENST00000505555 LIASO43766 372 aa20.61■□□□□ 0.89
SDHA-206ENST00000505555 TTC4O95801 387 aa20.61■□□□□ 0.89
SDHA-206ENST00000505555 ITGB3P05106 788 aa20.61■□□□□ 0.89
SDHA-206ENST00000505555 LGALS2P05162 132 aa20.61■□□□□ 0.89
SDHA-206ENST00000505555 ZNF286BP0CG31 522 aa20.61■□□□□ 0.89
SDHA-206ENST00000505555 KLRC2P26717 231 aa20.61■□□□□ 0.89
SDHA-206ENST00000505555 CDH5P33151 784 aaPredicted RBP20.61■□□□□ 0.89
SDHA-206ENST00000505555 ZNF667Q5HYK9 610 aa20.61■□□□□ 0.89
SDHA-206ENST00000505555 SPOCD1Q6ZMY3 1216 aa20.61■□□□□ 0.89
SDHA-206ENST00000505555 JOSD2Q8TAC2 188 aa20.61■□□□□ 0.89
SDHA-206ENST00000505555 RBM41Q96IZ5 413 aaKnown RBP20.61■□□□□ 0.89
SDHA-206ENST00000505555 TWNKQ96RR1 684 aa20.61■□□□□ 0.89
SDHA-206ENST00000505555 AKT3Q9Y243 479 aa20.61■□□□□ 0.89
SDHA-206ENST00000505555 CEP83Q9Y592 693 aa20.61■□□□□ 0.89
SDHA-206ENST00000505555 ATXN2Q99700 1313 aaKnown RBP20.61■□□□□ 0.89
SDHA-206ENST00000505555 ASAP2O43150 1006 aa20.61■□□□□ 0.89
SDHA-206ENST00000505555 CETN2P41208 172 aa20.61■□□□□ 0.89
SDHA-206ENST00000505555 PSMC4P43686 418 aa20.61■□□□□ 0.89
SDHA-206ENST00000505555 RAD23BP54727 409 aa20.61■□□□□ 0.89
SDHA-206ENST00000505555 IFT88Q13099 833 aa20.61■□□□□ 0.89
SDHA-206ENST00000505555 P3H1Q32P28 736 aa20.61■□□□□ 0.89
SDHA-206ENST00000505555 TNFAIP8L3Q5GJ75 292 aa20.61■□□□□ 0.89
SDHA-206ENST00000505555 TAPT1Q6NXT6 567 aa20.61■□□□□ 0.89
SDHA-206ENST00000505555 CCDC89Q8N998 374 aa20.61■□□□□ 0.89
SDHA-206ENST00000505555 C3orf20Q8ND61 904 aa20.61■□□□□ 0.89
SDHA-206ENST00000505555 CTNNAL1Q9UBT7 734 aa20.61■□□□□ 0.89
SDHA-206ENST00000505555 ZNF148Q9UQR1 794 aa20.61■□□□□ 0.89
SDHA-206ENST00000505555 MGAMO43451 1857 aa20.6■□□□□ 0.89
SDHA-206ENST00000505555 LRRD1A4D1F6 860 aa20.6■□□□□ 0.89
SDHA-206ENST00000505555 ASB14A6NK59 587 aa20.6■□□□□ 0.89
SDHA-206ENST00000505555 CDR1P51861 262 aa20.6■□□□□ 0.89
SDHA-206ENST00000505555 PIGHQ14442 188 aaPredicted RBP20.6■□□□□ 0.89
SDHA-206ENST00000505555 AMHR2Q16671 573 aa20.6■□□□□ 0.89
SDHA-206ENST00000505555 ILDR2Q71H61 639 aa20.6■□□□□ 0.89
SDHA-206ENST00000505555 EXOC3L1Q86VI1 746 aa20.6■□□□□ 0.89
SDHA-206ENST00000505555 IPO4Q8TEX9 1081 aaKnown RBP20.6■□□□□ 0.89
SDHA-206ENST00000505555 AFG1LQ8WV93 481 aa20.6■□□□□ 0.89
SDHA-206ENST00000505555 PRMT7Q9NVM4 692 aaPredicted RBP20.6■□□□□ 0.89
SDHA-206ENST00000505555 NINJ2Q9NZG7 142 aa20.6■□□□□ 0.89
SDHA-206ENST00000505555 TJP3O95049 919 aa20.59■□□□□ 0.89
SDHA-206ENST00000505555 IL18RAPO95256 599 aa20.59■□□□□ 0.89
SDHA-206ENST00000505555 PHKA2P46019 1235 aa20.59■□□□□ 0.89
SDHA-206ENST00000505555 CAV1Q03135 178 aa20.59■□□□□ 0.89
SDHA-206ENST00000505555 SMTNL2Q2TAL5 461 aa20.59■□□□□ 0.89
SDHA-206ENST00000505555 TTC31Q49AM3 519 aaPredicted RBP20.59■□□□□ 0.89
SDHA-206ENST00000505555 MAMDC4Q6UXC1 1216 aa20.59■□□□□ 0.89
SDHA-206ENST00000505555 ATXN2LQ8WWM7 1075 aaKnown RBP20.59■□□□□ 0.89
SDHA-206ENST00000505555 BCO2Q9BYV7 579 aa20.59■□□□□ 0.89
SDHA-206ENST00000505555 ROPN1BQ9BZX4 212 aaPredicted RBP20.59■□□□□ 0.89
SDHA-206ENST00000505555 ZWILCHQ9H900 591 aa20.59■□□□□ 0.89
SDHA-206ENST00000505555 ROPN1Q9HAT0 212 aaPredicted RBP20.59■□□□□ 0.89
SDHA-206ENST00000505555 KRT3P12035 628 aa20.59■□□□□ 0.89
SDHA-206ENST00000505555 CREB1P16220 341 aa20.59■□□□□ 0.89
SDHA-206ENST00000505555 YBX3P16989 372 aaKnown RBP eCLIP20.59■□□□□ 0.891e-8■□□□□ 10.3
SDHA-206ENST00000505555 PSMA2P25787 234 aa20.59■□□□□ 0.89
SDHA-206ENST00000505555 EPHX2P34913 555 aa20.59■□□□□ 0.89
SDHA-206ENST00000505555 YWHAEP62258 255 aaKnown RBP20.59■□□□□ 0.89
SDHA-206ENST00000505555 SF3A3Q12874 501 aaKnown RBP eCLIP20.59■□□□□ 0.895e-11■■■■■ 28
SDHA-206ENST00000505555 MKRN3Q13064 507 aaKnown RBP20.59■□□□□ 0.89
SDHA-206ENST00000505555 KCNT1Q5JUK3 1230 aa20.59■□□□□ 0.89
SDHA-206ENST00000505555 RNF187Q5TA31 235 aaPredicted RBP20.59■□□□□ 0.89
SDHA-206ENST00000505555 LRRC38Q5VT99 294 aa20.59■□□□□ 0.89
SDHA-206ENST00000505555 CPLX4Q7Z7G2 160 aa20.59■□□□□ 0.89
SDHA-206ENST00000505555 CROCCP2Q86T23 111 aa20.59■□□□□ 0.89
SDHA-206ENST00000505555 KIAA0319LQ8IZA0 1049 aa20.59■□□□□ 0.89
SDHA-206ENST00000505555 MICALL1Q8N3F8 863 aa20.59■□□□□ 0.89
SDHA-206ENST00000505555 OTUD6BQ8N6M0 293 aa20.59■□□□□ 0.89
SDHA-206ENST00000505555 ARFGAP1Q8N6T3 406 aa20.59■□□□□ 0.89
SDHA-206ENST00000505555 EMC1Q8N766 993 aa20.59■□□□□ 0.89
SDHA-206ENST00000505555 CENPTQ96BT3 561 aa20.59■□□□□ 0.89
SDHA-206ENST00000505555 C9orf72Q96LT7 481 aa20.59■□□□□ 0.89
SDHA-206ENST00000505555 CPXM1Q96SM3 734 aa20.59■□□□□ 0.89
SDHA-206ENST00000505555 PDZD7Q9H5P4 517 aa20.59■□□□□ 0.89
SDHA-206ENST00000505555 SAE1Q9UBE0 346 aaPredicted RBP20.59■□□□□ 0.89
SDHA-206ENST00000505555 KIAA0754O94854 1291 aa20.58■□□□□ 0.89
SDHA-206ENST00000505555 DRD4P21917 467 aa20.58■□□□□ 0.89
SDHA-206ENST00000505555 ADORA2AP29274 412 aa20.58■□□□□ 0.89
SDHA-206ENST00000505555 PSMC1P62191 440 aaKnown RBP20.58■□□□□ 0.89
SDHA-206ENST00000505555 LAMC2Q13753 1193 aa20.58■□□□□ 0.89
SDHA-206ENST00000505555 EAPPQ56P03 285 aaPredicted RBP20.58■□□□□ 0.89
SDHA-206ENST00000505555 ZNF484Q5JVG2 852 aa20.58■□□□□ 0.89
SDHA-206ENST00000505555 MFSD5Q6N075 450 aa20.58■□□□□ 0.89
SDHA-206ENST00000505555 DPH6Q7L8W6 267 aa20.58■□□□□ 0.89
SDHA-206ENST00000505555 SPATS2Q86XZ4 545 aaKnown RBP20.58■□□□□ 0.89
SDHA-206ENST00000505555 SLC4A11Q8NBS3 891 aa20.58■□□□□ 0.89
SDHA-206ENST00000505555 PRMT1Q99873 361 aaKnown RBP20.58■□□□□ 0.89
SDHA-206ENST00000505555 ELOVL4Q9GZR5 314 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms