RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 WDR27A2RRH5 827 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 MYBPHLA2RUH7 354 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 CYB561D2O14569 222 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 TEX28O15482 410 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 STX10O60499 249 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 N4BP1O75113 896 aaKnown RBP5.29□□□□□ -1.56
LMNB1-208ENST00000504788 ATP2C2O75185 946 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 TADA2AO75478 443 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 C1RP00736 705 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 GYPCP04921 128 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 KRT19P08727 400 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 WEE2P0C1S8 567 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 PNMA6AP0CW24 399 aaPredicted RBP5.29□□□□□ -1.56
LMNB1-208ENST00000504788 GTF2F1P35269 517 aaKnown RBP eCLIP5.29□□□□□ -1.56
LMNB1-208ENST00000504788 CLCN1P35523 988 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 LTBRP36941 435 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 PIK3CAP42336 1068 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 CLCN4P51793 760 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 CACNA2D1P54289 1103 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 ELAVL2Q12926 359 aaKnown RBP5.29□□□□□ -1.56
LMNB1-208ENST00000504788 BIRC3Q13489 604 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 ZNF699Q32M78 642 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 USP41Q3LFD5 358 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 PKDCCQ504Y2 493 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 ZNF667Q5HYK9 610 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 IQCEQ6IPM2 695 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 TMEM184AQ6ZMB5 413 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 GBP6Q6ZN66 633 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 RRAGAQ7L523 313 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 FAM71AQ8IYT1 594 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 SLC4A11Q8NBS3 891 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 FBXO22Q8NEZ5 403 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 SLC22A17Q8WUG5 538 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 ARNTL2Q8WYA1 636 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 DDX1Q92499 740 aaKnown RBP5.29□□□□□ -1.56
LMNB1-208ENST00000504788 JAKMIP2Q96AA8 810 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 MRPL38Q96DV4 380 aaKnown RBP5.29□□□□□ -1.56
LMNB1-208ENST00000504788 KLHL5Q96PQ7 755 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 FAM193BQ96PV7 902 aaPredicted RBP5.29□□□□□ -1.56
LMNB1-208ENST00000504788 TCF25Q9BQ70 676 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 TTPALQ9BTX7 342 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 ZCWPW1Q9H0M4 648 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 LMAN2LQ9H0V9 348 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 PRDM12Q9H4Q4 367 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.29□□□□□ -1.561e-6■■■■■ 45.9
LMNB1-208ENST00000504788 TLR9Q9NR96 1032 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 AAASQ9NRG9 546 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 CISHQ9NSE2 258 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 MTMR10Q9NXD2 777 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 LMCD1Q9NZU5 365 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 IFNKQ9P0W0 207 aa5.29□□□□□ -1.56
LMNB1-208ENST00000504788 ITIH6Q6UXX5 1313 aa5.28□□□□□ -1.56
LMNB1-208ENST00000504788 F8VZ95 297 aa5.28□□□□□ -1.56
LMNB1-208ENST00000504788 FOXN3O00409 490 aaPredicted RBP5.28□□□□□ -1.56
LMNB1-208ENST00000504788 NRG2O14511 850 aaPredicted RBP5.28□□□□□ -1.56
LMNB1-208ENST00000504788 CFHP08603 1231 aa5.28□□□□□ -1.56
LMNB1-208ENST00000504788 OR4Q2P0C623 313 aa5.28□□□□□ -1.56
LMNB1-208ENST00000504788 RPL17P18621 184 aaKnown RBP5.28□□□□□ -1.56
LMNB1-208ENST00000504788 GLUD2P49448 558 aa5.28□□□□□ -1.56
LMNB1-208ENST00000504788 NDST1P52848 882 aa5.28□□□□□ -1.56
LMNB1-208ENST00000504788 ROR1Q01973 937 aa5.28□□□□□ -1.56
LMNB1-208ENST00000504788 UBXN1Q04323 297 aa5.28□□□□□ -1.56
LMNB1-208ENST00000504788 YWHAHQ04917 246 aaPredicted RBP5.28□□□□□ -1.56
LMNB1-208ENST00000504788 MYO1EQ12965 1108 aa5.28□□□□□ -1.56
LMNB1-208ENST00000504788 GPR17Q13304 367 aa5.28□□□□□ -1.56
LMNB1-208ENST00000504788 RAB33AQ14088 237 aa5.28□□□□□ -1.56
LMNB1-208ENST00000504788 TPD52L1Q16890 204 aaPredicted RBP5.28□□□□□ -1.56
LMNB1-208ENST00000504788 UVSSAQ2YD98 709 aa5.28□□□□□ -1.56
LMNB1-208ENST00000504788 INTS6LQ5JSJ4 861 aaKnown RBP5.28□□□□□ -1.56
LMNB1-208ENST00000504788 HGSNATQ68CP4 663 aa5.28□□□□□ -1.56
LMNB1-208ENST00000504788 OVOS1Q6IE37 1185 aa5.28□□□□□ -1.56
LMNB1-208ENST00000504788 WDR59Q6PJI9 974 aa5.28□□□□□ -1.56
LMNB1-208ENST00000504788 IRF2BP2Q7Z5L9 587 aa5.28□□□□□ -1.56
LMNB1-208ENST00000504788 UNC93AQ86WB7 457 aa5.28□□□□□ -1.56
LMNB1-208ENST00000504788 VSTM4Q8IW00 320 aa5.28□□□□□ -1.56
LMNB1-208ENST00000504788 ADGRF2Q8IZF7 708 aa5.28□□□□□ -1.56
LMNB1-208ENST00000504788 FUKQ8N0W3 1084 aa5.28□□□□□ -1.56
LMNB1-208ENST00000504788 TMEM86AQ8N2M4 240 aa5.28□□□□□ -1.56
LMNB1-208ENST00000504788 TTC9BQ8N6N2 239 aa5.28□□□□□ -1.56
LMNB1-208ENST00000504788 C12orf29Q8N999 325 aa5.28□□□□□ -1.56
LMNB1-208ENST00000504788 APPL2Q8NEU8 664 aa5.28□□□□□ -1.56
LMNB1-208ENST00000504788 ZMIZ2Q8NF64 920 aa5.28□□□□□ -1.56
LMNB1-208ENST00000504788 TFAP2BQ92481 460 aa5.28□□□□□ -1.56
LMNB1-208ENST00000504788 PCED1BQ96HM7 432 aa5.28□□□□□ -1.56
LMNB1-208ENST00000504788 MRFAP1L1Q96HT8 127 aa5.28□□□□□ -1.56
LMNB1-208ENST00000504788 ACBD6Q9BR61 282 aa5.28□□□□□ -1.56
LMNB1-208ENST00000504788 CYP3A43Q9HB55 503 aa5.28□□□□□ -1.56
LMNB1-208ENST00000504788 DDX43Q9NXZ2 648 aaKnown RBP5.28□□□□□ -1.56
LMNB1-208ENST00000504788 NXF1Q9UBU9 619 aaKnown RBP5.28□□□□□ -1.56
LMNB1-208ENST00000504788 BARX2Q9UMQ3 279 aaPredicted RBP5.28□□□□□ -1.56
LMNB1-208ENST00000504788 CDY1Q9Y6F8 540 aa5.28□□□□□ -1.56
LMNB1-208ENST00000504788 KIF26AQ9ULI4 1882 aaPredicted RBP5.28□□□□□ -1.56
LMNB1-208ENST00000504788 A0A1W2PQJ5 194 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 HHLA1C9JL84 531 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 TGM5O43548 720 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 TRAPPC3O43617 180 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 HUS1O60921 280 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 CLASP2O75122 1294 aaKnown RBP5.27□□□□□ -1.57
LMNB1-208ENST00000504788 BEST1O76090 585 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 SEC24AO95486 1093 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms