RNA–Protein interactions for RNA: ENST00000504651.5

DDR1-253, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-253ENST00000504651 DEFB123Q8N688 67 aa14.9□□□□□ -0.02
DDR1-253ENST00000504651 KREMEN1Q96MU8 473 aa14.9□□□□□ -0.02
DDR1-253ENST00000504651 KLHL5Q96PQ7 755 aa14.9□□□□□ -0.02
DDR1-253ENST00000504651 TMEM209Q96SK2 561 aa14.9□□□□□ -0.02
DDR1-253ENST00000504651 DNAI2Q9GZS0 605 aa14.9□□□□□ -0.02
DDR1-253ENST00000504651 FAM124BQ9H5Z6 455 aaPredicted RBP14.9□□□□□ -0.02
DDR1-253ENST00000504651 NSUN3Q9H649 340 aaKnown RBP14.9□□□□□ -0.02
DDR1-253ENST00000504651 RXFP1Q9HBX9 757 aa14.9□□□□□ -0.02
DDR1-253ENST00000504651 LMCD1Q9NZU5 365 aa14.9□□□□□ -0.02
DDR1-253ENST00000504651 HMGXB4Q9UGU5 601 aa14.9□□□□□ -0.02
DDR1-253ENST00000504651 CDH9Q9ULB4 789 aa14.9□□□□□ -0.02
DDR1-253ENST00000504651 BARX2Q9UMQ3 279 aaPredicted RBP14.9□□□□□ -0.02
DDR1-253ENST00000504651 STXBP5LQ9Y2K9 1186 aa14.9□□□□□ -0.02
DDR1-253ENST00000504651 DAAM1Q9Y4D1 1078 aa14.9□□□□□ -0.02
DDR1-253ENST00000504651 NME7Q9Y5B8 376 aa14.9□□□□□ -0.02
DDR1-253ENST00000504651 PCDHB4Q9Y5E5 795 aa14.9□□□□□ -0.02
DDR1-253ENST00000504651 LAMA2P24043 3122 aaKnown RBP14.89□□□□□ -0.03
DDR1-253ENST00000504651 EPHB6O15197 1021 aa14.89□□□□□ -0.03
DDR1-253ENST00000504651 AP5Z1O43299 807 aa14.89□□□□□ -0.03
DDR1-253ENST00000504651 TBC1D4O60343 1298 aa14.89□□□□□ -0.03
DDR1-253ENST00000504651 OR4Q2P0C623 313 aa14.89□□□□□ -0.03
DDR1-253ENST00000504651 LMO2P25791 158 aa14.89□□□□□ -0.03
DDR1-253ENST00000504651 KLRC2P26717 231 aa14.89□□□□□ -0.03
DDR1-253ENST00000504651 OR1D2P34982 312 aa14.89□□□□□ -0.03
DDR1-253ENST00000504651 POLR2FP61218 127 aaKnown RBP14.89□□□□□ -0.03
DDR1-253ENST00000504651 ROR1Q01973 937 aa14.89□□□□□ -0.03
DDR1-253ENST00000504651 ORC1Q13415 861 aa14.89□□□□□ -0.03
DDR1-253ENST00000504651 ADGRE1Q14246 886 aa14.89□□□□□ -0.03
DDR1-253ENST00000504651 ZNF394Q53GI3 561 aa14.89□□□□□ -0.03
DDR1-253ENST00000504651 SLC8B1Q6J4K2 584 aa14.89□□□□□ -0.03
DDR1-253ENST00000504651 DPY19L2P1Q6NXN4 242 aa14.89□□□□□ -0.03
DDR1-253ENST00000504651 RSPO2Q6UXX9 243 aaPredicted RBP14.89□□□□□ -0.03
DDR1-253ENST00000504651 DCP1BQ8IZD4 617 aaKnown RBP14.89□□□□□ -0.03
DDR1-253ENST00000504651 UBR7Q8N806 425 aa14.89□□□□□ -0.03
DDR1-253ENST00000504651 MYLIPQ8WY64 445 aa14.89□□□□□ -0.03
DDR1-253ENST00000504651 JAKMIP2Q96AA8 810 aa14.89□□□□□ -0.03
DDR1-253ENST00000504651 CLSTN3Q9BQT9 956 aa14.89□□□□□ -0.03
DDR1-253ENST00000504651 ACBD6Q9BR61 282 aa14.89□□□□□ -0.03
DDR1-253ENST00000504651 NT5C1AQ9BXI3 368 aa14.89□□□□□ -0.03
DDR1-253ENST00000504651 ZCWPW1Q9H0M4 648 aa14.89□□□□□ -0.03
DDR1-253ENST00000504651 DPEP3Q9H4B8 488 aa14.89□□□□□ -0.03
DDR1-253ENST00000504651 NLRC4Q9NPP4 1024 aa14.89□□□□□ -0.03
DDR1-253ENST00000504651 GOLGA6L3A6NEY3 463 aa14.88□□□□□ -0.03
DDR1-253ENST00000504651 ADAM12O43184 909 aa14.88□□□□□ -0.03
DDR1-253ENST00000504651 NOL4O94818 638 aa14.88□□□□□ -0.03
DDR1-253ENST00000504651 KRT5P13647 590 aa14.88□□□□□ -0.03
DDR1-253ENST00000504651 ACO1P21399 889 aaKnown RBP14.88□□□□□ -0.03
DDR1-253ENST00000504651 PBX1P40424 430 aa14.88□□□□□ -0.03
DDR1-253ENST00000504651 NRIP1P48552 1158 aa14.88□□□□□ -0.03
DDR1-253ENST00000504651 TCEAL5Q5H9L2 206 aa14.88□□□□□ -0.03
DDR1-253ENST00000504651 TMEM270Q6UE05 265 aa14.88□□□□□ -0.03
DDR1-253ENST00000504651 CACNA2D4Q7Z3S7 1137 aa14.88□□□□□ -0.03
DDR1-253ENST00000504651 ACOT1Q86TX2 421 aa14.88□□□□□ -0.03
DDR1-253ENST00000504651 RBM23Q86U06 439 aaKnown RBP14.88□□□□□ -0.03
DDR1-253ENST00000504651 MICALL1Q8N3F8 863 aa14.88□□□□□ -0.03
DDR1-253ENST00000504651 RBBP8NLQ8NC74 664 aaPredicted RBP14.88□□□□□ -0.03
DDR1-253ENST00000504651 B3GALNT2Q8NCR0 500 aa14.88□□□□□ -0.03
DDR1-253ENST00000504651 TNIP3Q96KP6 325 aa14.88□□□□□ -0.03
DDR1-253ENST00000504651 SPAG5Q96R06 1193 aa14.88□□□□□ -0.03
DDR1-253ENST00000504651 TWNKQ96RR1 684 aa14.88□□□□□ -0.03
DDR1-253ENST00000504651 TLE6Q9H808 572 aa14.88□□□□□ -0.03
DDR1-253ENST00000504651 CEP72Q9P209 647 aa14.88□□□□□ -0.03
DDR1-253ENST00000504651 MTCH2Q9Y6C9 303 aa14.88□□□□□ -0.03
DDR1-253ENST00000504651 ITIH6Q6UXX5 1313 aa14.88□□□□□ -0.03
DDR1-253ENST00000504651 WDR27A2RRH5 827 aa14.87□□□□□ -0.03
DDR1-253ENST00000504651 PER2O15055 1255 aa14.87□□□□□ -0.03
DDR1-253ENST00000504651 CLASP2O75122 1294 aaKnown RBP14.87□□□□□ -0.03
DDR1-253ENST00000504651 ATP2C2O75185 946 aa14.87□□□□□ -0.03
DDR1-253ENST00000504651 GLUD1P00367 558 aa14.87□□□□□ -0.03
DDR1-253ENST00000504651 USP8P40818 1118 aa14.87□□□□□ -0.03
DDR1-253ENST00000504651 ZNF75DP51815 510 aa14.87□□□□□ -0.03
DDR1-253ENST00000504651 RAB33AQ14088 237 aa14.87□□□□□ -0.03
DDR1-253ENST00000504651 DRAP1Q14919 205 aaPredicted RBP14.87□□□□□ -0.03
DDR1-253ENST00000504651 DUSP6Q16828 381 aa14.87□□□□□ -0.03
DDR1-253ENST00000504651 CCDC142Q17RM4 750 aa14.87□□□□□ -0.03
DDR1-253ENST00000504651 SLC39A12Q504Y0 691 aa14.87□□□□□ -0.03
DDR1-253ENST00000504651 MDH1BQ5I0G3 518 aa14.87□□□□□ -0.03
DDR1-253ENST00000504651 PPFIBP1Q86W92 1011 aa14.87□□□□□ -0.03
DDR1-253ENST00000504651 PALB2Q86YC2 1186 aa14.87□□□□□ -0.03
DDR1-253ENST00000504651 WHAMMQ8TF30 809 aa14.87□□□□□ -0.03
DDR1-253ENST00000504651 SHC3Q92529 594 aa14.87□□□□□ -0.03
DDR1-253ENST00000504651 GUCD1Q96NT3 240 aa14.87□□□□□ -0.03
DDR1-253ENST00000504651 PGLYRP2Q96PD5 576 aa14.87□□□□□ -0.03
DDR1-253ENST00000504651 CDCA3Q99618 268 aaPredicted RBP14.87□□□□□ -0.03
DDR1-253ENST00000504651 CDX2Q99626 313 aaPredicted RBP14.87□□□□□ -0.03
DDR1-253ENST00000504651 NAA15Q9BXJ9 866 aaKnown RBP14.87□□□□□ -0.03
DDR1-253ENST00000504651 ELOVL4Q9GZR5 314 aa14.87□□□□□ -0.03
DDR1-253ENST00000504651 CRTAC1Q9NQ79 661 aa14.87□□□□□ -0.03
DDR1-253ENST00000504651 PTPRDP23468 1912 aa14.87□□□□□ -0.03
DDR1-253ENST00000504651 LAMA3Q16787 3333 aa14.86□□□□□ -0.03
DDR1-253ENST00000504651 CHD7Q9P2D1 2997 aa14.86□□□□□ -0.03
DDR1-253ENST00000504651 FSD2A1L4K1 749 aa14.86□□□□□ -0.03
DDR1-253ENST00000504651 MTMR11A4FU01 709 aa14.86□□□□□ -0.03
DDR1-253ENST00000504651 F8VZ95 297 aa14.86□□□□□ -0.03
DDR1-253ENST00000504651 PNMA6AP0CW24 399 aaPredicted RBP14.86□□□□□ -0.03
DDR1-253ENST00000504651 FOSL2P15408 326 aa14.86□□□□□ -0.03
DDR1-253ENST00000504651 PTPN1P18031 435 aaKnown RBP14.86□□□□□ -0.03
DDR1-253ENST00000504651 POU3F3P20264 500 aaPredicted RBP14.86□□□□□ -0.03
DDR1-253ENST00000504651 CLCN4P51793 760 aa14.86□□□□□ -0.03
DDR1-253ENST00000504651 RAD23BP54727 409 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms