RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 SP9P0CG40 484 aa17.51■□□□□ 0.39
SCLT1-204ENST00000503215 HAPLN1P10915 354 aaPredicted RBP17.51■□□□□ 0.39
SCLT1-204ENST00000503215 PSMC3P17980 439 aa17.51■□□□□ 0.39
SCLT1-204ENST00000503215 ACAT1P24752 427 aaKnown RBP17.51■□□□□ 0.39
SCLT1-204ENST00000503215 GABRR2P28476 465 aa17.51■□□□□ 0.39
SCLT1-204ENST00000503215 SDHAF4Q5VUM1 108 aa17.51■□□□□ 0.39
SCLT1-204ENST00000503215 ARID3BQ8IVW6 561 aaPredicted RBP17.51■□□□□ 0.39
SCLT1-204ENST00000503215 GRAMD1CQ8IYS0 662 aa17.51■□□□□ 0.39
SCLT1-204ENST00000503215 ZNF687Q8N1G0 1237 aa17.51■□□□□ 0.39
SCLT1-204ENST00000503215 ZNF560Q96MR9 790 aa17.51■□□□□ 0.39
SCLT1-204ENST00000503215 ATXN3LQ9H3M9 355 aa17.51■□□□□ 0.39
SCLT1-204ENST00000503215 ASB3Q9Y575 518 aa17.51■□□□□ 0.39
SCLT1-204ENST00000503215 ARNTLO00327 626 aa17.5■□□□□ 0.39
SCLT1-204ENST00000503215 KRT19P08727 400 aa17.5■□□□□ 0.39
SCLT1-204ENST00000503215 ME1P48163 572 aa17.5■□□□□ 0.39
SCLT1-204ENST00000503215 TUFMP49411 452 aaKnown RBP17.5■□□□□ 0.39
SCLT1-204ENST00000503215 CYP4F8P98187 520 aa17.5■□□□□ 0.39
SCLT1-204ENST00000503215 EHHADHQ08426 723 aa17.5■□□□□ 0.39
SCLT1-204ENST00000503215 EP300Q09472 2414 aaPredicted RBP17.5■□□□□ 0.39
SCLT1-204ENST00000503215 FAM26FQ5R3K3 315 aa17.5■□□□□ 0.39
SCLT1-204ENST00000503215 GPR158Q5T848 1215 aa17.5■□□□□ 0.39
SCLT1-204ENST00000503215 CNNM4Q6P4Q7 775 aa17.5■□□□□ 0.39
SCLT1-204ENST00000503215 MFSD6LQ8IWD5 586 aa17.5■□□□□ 0.39
SCLT1-204ENST00000503215 NELFCDQ8IXH7 590 aa17.5■□□□□ 0.39
SCLT1-204ENST00000503215 ZNF507Q8TCN5 953 aa17.5■□□□□ 0.39
SCLT1-204ENST00000503215 FAM200AQ8TCP9 573 aa17.5■□□□□ 0.39
SCLT1-204ENST00000503215 CACTINQ8WUQ7 758 aaKnown RBP17.5■□□□□ 0.39
SCLT1-204ENST00000503215 SCFD1Q8WVM8 642 aa17.5■□□□□ 0.39
SCLT1-204ENST00000503215 CUEDC2Q9H467 287 aa17.5■□□□□ 0.39
SCLT1-204ENST00000503215 INTS13Q9NVM9 706 aa17.5■□□□□ 0.39
SCLT1-204ENST00000503215 SPATA6Q9NWH7 488 aaPredicted RBP17.5■□□□□ 0.39
SCLT1-204ENST00000503215 HSPBP1Q9NZL4 362 aa17.5■□□□□ 0.39
SCLT1-204ENST00000503215 HSFX1Q9UBD0 423 aa17.5■□□□□ 0.39
SCLT1-204ENST00000503215 CLIC2O15247 247 aa17.49■□□□□ 0.39
SCLT1-204ENST00000503215 PNPLA4P41247 253 aa17.49■□□□□ 0.39
SCLT1-204ENST00000503215 AFMP43652 599 aa17.49■□□□□ 0.39
SCLT1-204ENST00000503215 RBP5P82980 135 aa17.49■□□□□ 0.39
SCLT1-204ENST00000503215 CUL4BQ13620 913 aa17.49■□□□□ 0.39
SCLT1-204ENST00000503215 RESP18Q5W5W9 173 aa17.49■□□□□ 0.39
SCLT1-204ENST00000503215 ZNF852Q6ZMS4 543 aa17.49■□□□□ 0.39
SCLT1-204ENST00000503215 TMEM150AQ86TG1 271 aa17.49■□□□□ 0.39
SCLT1-204ENST00000503215 RDH13Q8NBN7 331 aa17.49■□□□□ 0.39
SCLT1-204ENST00000503215 KCNG4Q8TDN1 519 aa17.49■□□□□ 0.39
SCLT1-204ENST00000503215 DNASE1L2Q92874 299 aa17.49■□□□□ 0.39
SCLT1-204ENST00000503215 CLDN23Q96B33 292 aa17.49■□□□□ 0.39
SCLT1-204ENST00000503215 ZFYVE19Q96K21 471 aa17.49■□□□□ 0.39
SCLT1-204ENST00000503215 PKMYT1Q99640 499 aa17.49■□□□□ 0.39
SCLT1-204ENST00000503215 PI4K2AQ9BTU6 479 aa17.49■□□□□ 0.39
SCLT1-204ENST00000503215 BCO2Q9BYV7 579 aa17.49■□□□□ 0.39
SCLT1-204ENST00000503215 OSBPL6Q9BZF3 934 aa17.49■□□□□ 0.39
SCLT1-204ENST00000503215 LRRC27Q9C0I9 530 aa17.49■□□□□ 0.39
SCLT1-204ENST00000503215 GPR88Q9GZN0 384 aa17.49■□□□□ 0.39
SCLT1-204ENST00000503215 SMG9Q9H0W8 520 aaKnown RBP17.49■□□□□ 0.39
SCLT1-204ENST00000503215 DDX43Q9NXZ2 648 aaKnown RBP17.49■□□□□ 0.39
SCLT1-204ENST00000503215 ITGA11Q9UKX5 1188 aa17.49■□□□□ 0.39
SCLT1-204ENST00000503215 NDRG2Q9UN36 371 aaKnown RBP17.49■□□□□ 0.39
SCLT1-204ENST00000503215 SNX9Q9Y5X1 595 aa17.49■□□□□ 0.39
SCLT1-204ENST00000503215 TCHHQ07283 1943 aa17.49■□□□□ 0.39
SCLT1-204ENST00000503215 GPR179Q6PRD1 2367 aa17.48■□□□□ 0.39
SCLT1-204ENST00000503215 WDR87Q6ZQQ6 2873 aa17.48■□□□□ 0.39
SCLT1-204ENST00000503215 MIA3Q5JRA6 1907 aa17.48■□□□□ 0.39
SCLT1-204ENST00000503215 ZNF233A6NK53 670 aa17.48■□□□□ 0.39
SCLT1-204ENST00000503215 PRAMEF12O95522 483 aa17.48■□□□□ 0.39
SCLT1-204ENST00000503215 HMGA1P17096 107 aaKnown RBP17.48■□□□□ 0.39
SCLT1-204ENST00000503215 AMPD3Q01432 767 aa17.48■□□□□ 0.39
SCLT1-204ENST00000503215 SOWAHAQ2M3V2 549 aa17.48■□□□□ 0.39
SCLT1-204ENST00000503215 UNC13DQ70J99 1090 aa17.48■□□□□ 0.39
SCLT1-204ENST00000503215 ITIH5Q86UX2 942 aa17.48■□□□□ 0.39
SCLT1-204ENST00000503215 DCP1BQ8IZD4 617 aaKnown RBP17.48■□□□□ 0.39
SCLT1-204ENST00000503215 LRRC52Q8N7C0 313 aa17.48■□□□□ 0.39
SCLT1-204ENST00000503215 TTC8Q8TAM2 541 aa17.48■□□□□ 0.39
SCLT1-204ENST00000503215 IRF7Q92985 503 aa17.48■□□□□ 0.39
SCLT1-204ENST00000503215 SLC46A2Q9BY10 475 aa17.48■□□□□ 0.39
SCLT1-204ENST00000503215 AGPAT3Q9NRZ7 376 aa17.48■□□□□ 0.39
SCLT1-204ENST00000503215 GDAP2Q9NXN4 497 aa17.48■□□□□ 0.39
SCLT1-204ENST00000503215 RCOR1Q9UKL0 485 aa17.48■□□□□ 0.39
SCLT1-204ENST00000503215 GVINP1Q7Z2Y8 2422 aa17.48■□□□□ 0.39
SCLT1-204ENST00000503215 ZNF263O14978 683 aa17.47■□□□□ 0.39
SCLT1-204ENST00000503215 EIF3DO15371 548 aaKnown RBP eCLIP17.47■□□□□ 0.39
SCLT1-204ENST00000503215 HUS1O60921 280 aa17.47■□□□□ 0.39
SCLT1-204ENST00000503215 ATP2C2O75185 946 aa17.47■□□□□ 0.39
SCLT1-204ENST00000503215 TMEM191BP0C7N4 346 aa17.47■□□□□ 0.39
SCLT1-204ENST00000503215 CYP2F1P24903 491 aa17.47■□□□□ 0.39
SCLT1-204ENST00000503215 SOX9P48436 509 aa17.47■□□□□ 0.39
SCLT1-204ENST00000503215 CYP2J2P51589 502 aa17.47■□□□□ 0.39
SCLT1-204ENST00000503215 DDR2Q16832 855 aa17.47■□□□□ 0.39
SCLT1-204ENST00000503215 TSSK4Q6SA08 328 aa17.47■□□□□ 0.39
SCLT1-204ENST00000503215 STXBP4Q6ZWJ1 553 aa17.47■□□□□ 0.39
SCLT1-204ENST00000503215 ADSSL1Q8N142 457 aa17.47■□□□□ 0.39
SCLT1-204ENST00000503215 SPPL2BQ8TCT7 592 aa17.47■□□□□ 0.39
SCLT1-204ENST00000503215 DEPDC1BQ8WUY9 529 aa17.47■□□□□ 0.39
SCLT1-204ENST00000503215 GZF1Q9H116 711 aaPredicted RBP17.47■□□□□ 0.39
SCLT1-204ENST00000503215 SLC39A2Q9NP94 309 aa17.47■□□□□ 0.39
SCLT1-204ENST00000503215 TRPV5Q9NQA5 729 aa17.47■□□□□ 0.39
SCLT1-204ENST00000503215 SERTAD1Q9UHV2 236 aa17.47■□□□□ 0.39
SCLT1-204ENST00000503215 GTF3C4Q9UKN8 822 aa17.47■□□□□ 0.39
SCLT1-204ENST00000503215 ZDHHC9Q9Y397 364 aa17.47■□□□□ 0.39
SCLT1-204ENST00000503215 PCDHB5Q9Y5E4 795 aa17.47■□□□□ 0.39
SCLT1-204ENST00000503215 PIAS3Q9Y6X2 628 aa17.47■□□□□ 0.39
SCLT1-204ENST00000503215 COL4A2P08572 1712 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms