RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 LLGL2Q6P1M3 1020 aa23.33■■□□□ 1.33
PTPN13-205ENST00000502971 STIM2Q9P246 746 aa23.33■■□□□ 1.33
PTPN13-205ENST00000502971 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.33■■□□□ 1.33
PTPN13-205ENST00000502971 SNX9Q9Y5X1 595 aa23.33■■□□□ 1.33
PTPN13-205ENST00000502971 PPEF2O14830 753 aa23.33■■□□□ 1.32
PTPN13-205ENST00000502971 MAN1A1P33908 653 aa23.33■■□□□ 1.32
PTPN13-205ENST00000502971 THPOP40225 353 aa23.33■■□□□ 1.32
PTPN13-205ENST00000502971 ACLYP53396 1101 aa23.33■■□□□ 1.32
PTPN13-205ENST00000502971 RWDD2BP57060 319 aa23.33■■□□□ 1.32
PTPN13-205ENST00000502971 NFX1Q12986 1120 aaKnown RBP23.33■■□□□ 1.32
PTPN13-205ENST00000502971 STILQ15468 1287 aa23.33■■□□□ 1.32
PTPN13-205ENST00000502971 SEL1L2Q5TEA6 688 aa23.33■■□□□ 1.32
PTPN13-205ENST00000502971 TCRBV5S1A1TA0A578 114 aa23.32■■□□□ 1.32
PTPN13-205ENST00000502971 MOXD2PA6NHM9 499 aa23.32■■□□□ 1.32
PTPN13-205ENST00000502971 MARCKSL1P49006 195 aa23.32■■□□□ 1.32
PTPN13-205ENST00000502971 PKN2Q16513 984 aaKnown RBP23.32■■□□□ 1.32
PTPN13-205ENST00000502971 PPP2R5EQ16537 467 aa23.32■■□□□ 1.32
PTPN13-205ENST00000502971 CCNI2Q6ZMN8 369 aaPredicted RBP23.32■■□□□ 1.32
PTPN13-205ENST00000502971 CTU1Q7Z7A3 348 aaKnown RBP23.32■■□□□ 1.32
PTPN13-205ENST00000502971 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.32■■□□□ 1.32
PTPN13-205ENST00000502971 TSEN34Q9BSV6 310 aaKnown RBP23.32■■□□□ 1.32
PTPN13-205ENST00000502971 AP1M1Q9BXS5 423 aa23.32■■□□□ 1.32
PTPN13-205ENST00000502971 TRIM7Q9C029 511 aa23.32■■□□□ 1.32
PTPN13-205ENST00000502971 FAM105AQ9NUU6 356 aa23.32■■□□□ 1.32
PTPN13-205ENST00000502971 IP6K2Q9UHH9 426 aa23.32■■□□□ 1.32
PTPN13-205ENST00000502971 DMGDHQ9UI17 866 aaKnown RBP23.32■■□□□ 1.32
PTPN13-205ENST00000502971 O00370 1275 aa23.31■■□□□ 1.32
PTPN13-205ENST00000502971 MICAL2O94851 1124 aa23.31■■□□□ 1.32
PTPN13-205ENST00000502971 ZNF211Q13398 564 aaPredicted RBP23.31■■□□□ 1.32
PTPN13-205ENST00000502971 ORC1Q13415 861 aa23.31■■□□□ 1.32
PTPN13-205ENST00000502971 FBXO47Q5MNV8 452 aa23.31■■□□□ 1.32
PTPN13-205ENST00000502971 DNAJC24Q6P3W2 148 aa23.31■■□□□ 1.32
PTPN13-205ENST00000502971 UNC93AQ86WB7 457 aa23.31■■□□□ 1.32
PTPN13-205ENST00000502971 ARRDC4Q8NCT1 418 aa23.31■■□□□ 1.32
PTPN13-205ENST00000502971 HDAC7Q8WUI4 952 aa23.31■■□□□ 1.32
PTPN13-205ENST00000502971 PLVAPQ9BX97 442 aa23.31■■□□□ 1.32
PTPN13-205ENST00000502971 GDAP2Q9NXN4 497 aa23.31■■□□□ 1.32
PTPN13-205ENST00000502971 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.31■■□□□ 1.32
PTPN13-205ENST00000502971 CENPFP49454 3210 aa23.31■■□□□ 1.32
PTPN13-205ENST00000502971 GOLGA6L10A0A0M3HER8 536 aa23.3■■□□□ 1.32
PTPN13-205ENST00000502971 TMEM191CA6NGB0 347 aa23.3■■□□□ 1.32
PTPN13-205ENST00000502971 TNFRSF8P28908 595 aa23.3■■□□□ 1.32
PTPN13-205ENST00000502971 GSCP56915 257 aaPredicted RBP23.3■■□□□ 1.32
PTPN13-205ENST00000502971 FAM26DQ5JW98 314 aa23.3■■□□□ 1.32
PTPN13-205ENST00000502971 CPNE8Q86YQ8 564 aa23.3■■□□□ 1.32
PTPN13-205ENST00000502971 KLHL7Q8IXQ5 586 aa23.3■■□□□ 1.32
PTPN13-205ENST00000502971 C3orf20Q8ND61 904 aa23.3■■□□□ 1.32
PTPN13-205ENST00000502971 MRPL45Q9BRJ2 306 aaKnown RBP23.3■■□□□ 1.32
PTPN13-205ENST00000502971 SLITRK6Q9H5Y7 841 aa23.3■■□□□ 1.32
PTPN13-205ENST00000502971 ERVK-5Q9HDB9 667 aa23.3■■□□□ 1.32
PTPN13-205ENST00000502971 WDR35Q9P2L0 1181 aa23.3■■□□□ 1.32
PTPN13-205ENST00000502971 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.3■■□□□ 1.32
PTPN13-205ENST00000502971 FRMPD3Q5JV73 1810 aa23.3■■□□□ 1.32
PTPN13-205ENST00000502971 HSPA1AP0DMV8 641 aaKnown RBP23.3■■□□□ 1.32
PTPN13-205ENST00000502971 HSPA1BP0DMV9 641 aaKnown RBP23.3■■□□□ 1.32
PTPN13-205ENST00000502971 ITGA4P13612 1032 aa23.3■■□□□ 1.32
PTPN13-205ENST00000502971 LRPAP1P30533 357 aa23.3■■□□□ 1.32
PTPN13-205ENST00000502971 TAF6P49848 677 aa23.3■■□□□ 1.32
PTPN13-205ENST00000502971 SLC7A5Q01650 507 aa23.3■■□□□ 1.32
PTPN13-205ENST00000502971 SV2CQ496J9 727 aa23.3■■□□□ 1.32
PTPN13-205ENST00000502971 LCLAT1Q6UWP7 414 aa23.3■■□□□ 1.32
PTPN13-205ENST00000502971 L1RE1Q9UN81 338 aa23.3■■□□□ 1.32
PTPN13-205ENST00000502971 NOD1Q9Y239 953 aa23.3■■□□□ 1.32
PTPN13-205ENST00000502971 KPNA7A9QM74 516 aa23.29■■□□□ 1.32
PTPN13-205ENST00000502971 CAND2O75155 1236 aa23.29■■□□□ 1.32
PTPN13-205ENST00000502971 ZMYND10O75800 440 aa23.29■■□□□ 1.32
PTPN13-205ENST00000502971 PYGMP11217 842 aa23.29■■□□□ 1.32
PTPN13-205ENST00000502971 PTPN20Q4JDL3 420 aa23.29■■□□□ 1.32
PTPN13-205ENST00000502971 PPP1R15BQ5SWA1 713 aa23.29■■□□□ 1.32
PTPN13-205ENST00000502971 IFT20Q8IY31 132 aa23.29■■□□□ 1.32
PTPN13-205ENST00000502971 C18orf8Q96DM3 657 aa23.29■■□□□ 1.32
PTPN13-205ENST00000502971 GLT1D1Q96MS3 346 aa23.29■■□□□ 1.32
PTPN13-205ENST00000502971 PPP1R10Q96QC0 940 aaKnown RBP23.29■■□□□ 1.32
PTPN13-205ENST00000502971 TRAIPQ9BWF2 469 aa23.29■■□□□ 1.32
PTPN13-205ENST00000502971 DNAI2Q9GZS0 605 aa23.29■■□□□ 1.32
PTPN13-205ENST00000502971 AGO3Q9H9G7 860 aaKnown RBP23.29■■□□□ 1.32
PTPN13-205ENST00000502971 RNF19AQ9NV58 838 aa23.29■■□□□ 1.32
PTPN13-205ENST00000502971 SLC38A7Q9NVC3 462 aa23.29■■□□□ 1.32
PTPN13-205ENST00000502971 CYTH4Q9UIA0 394 aa23.29■■□□□ 1.32
PTPN13-205ENST00000502971 SCN1AP35498 2009 aa23.29■■□□□ 1.32
PTPN13-205ENST00000502971 M0QYV0 167 aa23.28■■□□□ 1.32
PTPN13-205ENST00000502971 PTGESO14684 152 aa23.28■■□□□ 1.32
PTPN13-205ENST00000502971 SART1O43290 800 aaKnown RBP23.28■■□□□ 1.32
PTPN13-205ENST00000502971 PSTPIP1O43586 416 aa23.28■■□□□ 1.32
PTPN13-205ENST00000502971 HEXIM1O94992 359 aaKnown RBP23.28■■□□□ 1.32
PTPN13-205ENST00000502971 GPD2P43304 727 aa23.28■■□□□ 1.32
PTPN13-205ENST00000502971 SOX4Q06945 474 aaPredicted RBP23.28■■□□□ 1.32
PTPN13-205ENST00000502971 SOWAHAQ2M3V2 549 aa23.28■■□□□ 1.32
PTPN13-205ENST00000502971 TRIM71Q2Q1W2 868 aaKnown RBP23.28■■□□□ 1.32
PTPN13-205ENST00000502971 HDXQ7Z353 690 aa23.28■■□□□ 1.32
PTPN13-205ENST00000502971 SH3TC2Q8TF17 1288 aa23.28■■□□□ 1.32
PTPN13-205ENST00000502971 FUT8Q9BYC5 575 aa23.28■■□□□ 1.32
PTPN13-205ENST00000502971 GDF3Q9NR23 364 aa23.28■■□□□ 1.32
PTPN13-205ENST00000502971 GIT1Q9Y2X7 761 aa23.28■■□□□ 1.32
PTPN13-205ENST00000502971 SQORQ9Y6N5 450 aa23.28■■□□□ 1.32
PTPN13-205ENST00000502971 RAD51CO43502 376 aa23.28■■□□□ 1.32
PTPN13-205ENST00000502971 GABRB2P47870 512 aa23.28■■□□□ 1.32
PTPN13-205ENST00000502971 RAB27AP51159 221 aa23.28■■□□□ 1.32
PTPN13-205ENST00000502971 LBX1P52954 281 aa23.28■■□□□ 1.32
PTPN13-205ENST00000502971 PAK2Q13177 524 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms