RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 POLR3GLQ9BT43 218 aa7.6□□□□□ -1.19
NEDD4-203ENST00000502612 CRB3Q9BUF7 120 aa7.6□□□□□ -1.19
NEDD4-203ENST00000502612 KLC2Q9H0B6 622 aa7.6□□□□□ -1.19
NEDD4-203ENST00000502612 A1CFQ9NQ94 594 aaKnown RBP7.6□□□□□ -1.19
NEDD4-203ENST00000502612 CCDC195A0A1B0GUA6 201 aa7.59□□□□□ -1.19
NEDD4-203ENST00000502612 MBD3L4A6NDZ8 208 aaPredicted RBP7.59□□□□□ -1.19
NEDD4-203ENST00000502612 MBD3L3A6NE82 208 aaPredicted RBP7.59□□□□□ -1.19
NEDD4-203ENST00000502612 PLSCR1O15162 318 aa7.59□□□□□ -1.19
NEDD4-203ENST00000502612 TRIM24O15164 1050 aa7.59□□□□□ -1.19
NEDD4-203ENST00000502612 NCR1O76036 304 aa7.59□□□□□ -1.19
NEDD4-203ENST00000502612 FGFR2P21802 821 aa7.59□□□□□ -1.19
NEDD4-203ENST00000502612 ZFP36P26651 326 aaKnown RBP7.59□□□□□ -1.19
NEDD4-203ENST00000502612 KLRC1P26715 233 aa7.59□□□□□ -1.19
NEDD4-203ENST00000502612 PPM1AP35813 382 aa7.59□□□□□ -1.19
NEDD4-203ENST00000502612 PIGFQ07326 219 aa7.59□□□□□ -1.19
NEDD4-203ENST00000502612 PRKD1Q15139 912 aaPredicted RBP7.59□□□□□ -1.19
NEDD4-203ENST00000502612 SLC35G1Q2M3R5 365 aa7.59□□□□□ -1.19
NEDD4-203ENST00000502612 LONRF3Q496Y0 759 aa7.59□□□□□ -1.19
NEDD4-203ENST00000502612 RABL3Q5HYI8 236 aa7.59□□□□□ -1.19
NEDD4-203ENST00000502612 FAM83BQ5T0W9 1011 aa7.59□□□□□ -1.19
NEDD4-203ENST00000502612 ZNF280BQ86YH2 543 aa7.59□□□□□ -1.19
NEDD4-203ENST00000502612 DCLRE1CQ96SD1 692 aaKnown RBP7.59□□□□□ -1.19
NEDD4-203ENST00000502612 KRTAP3-1Q9BYR8 98 aa7.59□□□□□ -1.19
NEDD4-203ENST00000502612 SIK2Q9H0K1 926 aa7.59□□□□□ -1.19
NEDD4-203ENST00000502612 TBC1D23Q9NUY8 699 aa7.59□□□□□ -1.19
NEDD4-203ENST00000502612 MID2Q9UJV3 735 aa7.59□□□□□ -1.19
NEDD4-203ENST00000502612 F5H423 210 aaPredicted RBP7.58□□□□□ -1.2
NEDD4-203ENST00000502612 RASSF9O75901 435 aa7.58□□□□□ -1.2
NEDD4-203ENST00000502612 FGF18O76093 207 aa7.58□□□□□ -1.2
NEDD4-203ENST00000502612 ANXA2P07355 339 aaKnown RBP7.58□□□□□ -1.2
NEDD4-203ENST00000502612 SPATA31D3P0C874 917 aa7.58□□□□□ -1.2
NEDD4-203ENST00000502612 CTSWP56202 376 aa7.58□□□□□ -1.2
NEDD4-203ENST00000502612 LILRA4P59901 499 aa7.58□□□□□ -1.2
NEDD4-203ENST00000502612 ZIK1Q3SY52 487 aaPredicted RBP7.58□□□□□ -1.2
NEDD4-203ENST00000502612 AMOTQ4VCS5 1084 aa7.58□□□□□ -1.2
NEDD4-203ENST00000502612 SPATA31D4Q6ZUB0 917 aa7.58□□□□□ -1.2
NEDD4-203ENST00000502612 TMPRSS6Q8IU80 811 aa7.58□□□□□ -1.2
NEDD4-203ENST00000502612 IL17DQ8TAD2 202 aa7.58□□□□□ -1.2
NEDD4-203ENST00000502612 CXorf38Q8TB03 319 aa7.58□□□□□ -1.2
NEDD4-203ENST00000502612 POC1BQ8TC44 478 aa7.58□□□□□ -1.2
NEDD4-203ENST00000502612 EXTL1Q92935 676 aa7.58□□□□□ -1.2
NEDD4-203ENST00000502612 IQCDQ96DY2 449 aa7.58□□□□□ -1.2
NEDD4-203ENST00000502612 SMPD4Q9NXE4 827 aa7.58□□□□□ -1.2
NEDD4-203ENST00000502612 MYO1AQ9UBC5 1043 aa7.58□□□□□ -1.2
NEDD4-203ENST00000502612 HDAC9Q9UKV0 1011 aa7.58□□□□□ -1.2
NEDD4-203ENST00000502612 PADI4Q9UM07 663 aa7.58□□□□□ -1.2
NEDD4-203ENST00000502612 MTO1Q9Y2Z2 717 aaKnown RBP7.58□□□□□ -1.2
NEDD4-203ENST00000502612 DIRC3C9JPN6 131 aa7.57□□□□□ -1.2
NEDD4-203ENST00000502612 TOR1BO14657 336 aa7.57□□□□□ -1.2
NEDD4-203ENST00000502612 MUSKO15146 869 aa7.57□□□□□ -1.2
NEDD4-203ENST00000502612 ERN1O75460 977 aaKnown RBP7.57□□□□□ -1.2
NEDD4-203ENST00000502612 CFIP05156 583 aa7.57□□□□□ -1.2
NEDD4-203ENST00000502612 TXNP10599 105 aaKnown RBP7.57□□□□□ -1.2
NEDD4-203ENST00000502612 KCNA2P16389 499 aa7.57□□□□□ -1.2
NEDD4-203ENST00000502612 NR4A1P22736 598 aa7.57□□□□□ -1.2
NEDD4-203ENST00000502612 VIPR2P41587 438 aa7.57□□□□□ -1.2
NEDD4-203ENST00000502612 MAPK10P53779 464 aa7.57□□□□□ -1.2
NEDD4-203ENST00000502612 MXRA7P84157 204 aa7.57□□□□□ -1.2
NEDD4-203ENST00000502612 SLC25A3Q00325 362 aa7.57□□□□□ -1.2
NEDD4-203ENST00000502612 CDSNQ15517 529 aa7.57□□□□□ -1.2
NEDD4-203ENST00000502612 GEN1Q17RS7 908 aa7.57□□□□□ -1.2
NEDD4-203ENST00000502612 MPEG1Q2M385 716 aa7.57□□□□□ -1.2
NEDD4-203ENST00000502612 DGKKQ5KSL6 1271 aa7.57□□□□□ -1.2
NEDD4-203ENST00000502612 SPDYAQ5MJ70 313 aa7.57□□□□□ -1.2
NEDD4-203ENST00000502612 ERAP2Q6P179 960 aa7.57□□□□□ -1.2
NEDD4-203ENST00000502612 TMEM132CQ8N3T6 1108 aa7.57□□□□□ -1.2
NEDD4-203ENST00000502612 SPSB4Q96A44 273 aa7.57□□□□□ -1.2
NEDD4-203ENST00000502612 NACC2Q96BF6 587 aa7.57□□□□□ -1.2
NEDD4-203ENST00000502612 C18orf8Q96DM3 657 aa7.57□□□□□ -1.2
NEDD4-203ENST00000502612 RNF31Q96EP0 1072 aa7.57□□□□□ -1.2
NEDD4-203ENST00000502612 MESP1Q9BRJ9 268 aa7.57□□□□□ -1.2
NEDD4-203ENST00000502612 COLEC11Q9BWP8 271 aa7.57□□□□□ -1.2
NEDD4-203ENST00000502612 WDR12Q9GZL7 423 aaKnown RBP7.57□□□□□ -1.2
NEDD4-203ENST00000502612 TRMT13Q9NUP7 481 aaKnown RBP7.57□□□□□ -1.2
NEDD4-203ENST00000502612 CEP72Q9P209 647 aa7.57□□□□□ -1.2
NEDD4-203ENST00000502612 FPGT-TNNI3KV9GXZ4 949 aa7.57□□□□□ -1.2
NEDD4-203ENST00000502612 SMARCA4P51532 1647 aa7.56□□□□□ -1.2
NEDD4-203ENST00000502612 H7C4K7 107 aa7.56□□□□□ -1.2
NEDD4-203ENST00000502612 GCLCP48506 637 aaPredicted RBP7.56□□□□□ -1.2
NEDD4-203ENST00000502612 HSPA7P48741 367 aa7.56□□□□□ -1.2
NEDD4-203ENST00000502612 CXADRP78310 365 aa7.56□□□□□ -1.2
NEDD4-203ENST00000502612 ARL13BQ3SXY8 428 aa7.56□□□□□ -1.2
NEDD4-203ENST00000502612 TUBB8Q3ZCM7 444 aa7.56□□□□□ -1.2
NEDD4-203ENST00000502612 CD300EQ496F6 205 aaPredicted RBP7.56□□□□□ -1.2
NEDD4-203ENST00000502612 PLA1AQ53H76 456 aa7.56□□□□□ -1.2
NEDD4-203ENST00000502612 FOXR2Q6PJQ5 311 aa7.56□□□□□ -1.2
NEDD4-203ENST00000502612 TMPRSS9Q7Z410 1059 aa7.56□□□□□ -1.2
NEDD4-203ENST00000502612 KCTD20Q7Z5Y7 419 aa7.56□□□□□ -1.2
NEDD4-203ENST00000502612 TMEM125Q96AQ2 219 aa7.56□□□□□ -1.2
NEDD4-203ENST00000502612 LRRC46Q96FV0 321 aa7.56□□□□□ -1.2
NEDD4-203ENST00000502612 ZC3H10Q96K80 434 aaKnown RBP7.56□□□□□ -1.2
NEDD4-203ENST00000502612 ARFGAP3Q9NP61 516 aa7.56□□□□□ -1.2
NEDD4-203ENST00000502612 AKIP1Q9NQ31 210 aa7.56□□□□□ -1.2
NEDD4-203ENST00000502612 RAD54BQ9Y620 910 aa7.56□□□□□ -1.2
NEDD4-203ENST00000502612 A0A087WZ62 844 aa7.55□□□□□ -1.2
NEDD4-203ENST00000502612 PLEKHD1A6NEE1 506 aa7.55□□□□□ -1.2
NEDD4-203ENST00000502612 MARCH11A6NNE9 402 aa7.55□□□□□ -1.2
NEDD4-203ENST00000502612 hCG_1984214I3L0E3 225 aa7.55□□□□□ -1.2
NEDD4-203ENST00000502612 RAB27BO00194 218 aa7.55□□□□□ -1.2
NEDD4-203ENST00000502612 IFRD1O00458 451 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms