RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 IL18RAPO95256 599 aa17.49■□□□□ 0.39
VCAN-204ENST00000502527 PGK2P07205 417 aa17.49■□□□□ 0.39
VCAN-204ENST00000502527 HNRNPH1P31943 449 aaKnown RBP17.49■□□□□ 0.39
VCAN-204ENST00000502527 IREB2P48200 963 aaKnown RBP17.49■□□□□ 0.39
VCAN-204ENST00000502527 ARSEP51690 589 aa17.49■□□□□ 0.39
VCAN-204ENST00000502527 VSTM1Q6UX27 236 aa17.49■□□□□ 0.39
VCAN-204ENST00000502527 POLNQ7Z5Q5 900 aa17.49■□□□□ 0.39
VCAN-204ENST00000502527 C9orf72Q96LT7 481 aa17.49■□□□□ 0.39
VCAN-204ENST00000502527 NLRP4Q96MN2 994 aa17.49■□□□□ 0.39
VCAN-204ENST00000502527 INO80BQ9C086 356 aaPredicted RBP17.49■□□□□ 0.39
VCAN-204ENST00000502527 FHDC1Q9C0D6 1143 aaPredicted RBP17.49■□□□□ 0.39
VCAN-204ENST00000502527 LHX5Q9H2C1 402 aa17.49■□□□□ 0.39
VCAN-204ENST00000502527 SMARCAD1Q9H4L7 1026 aa17.49■□□□□ 0.39
VCAN-204ENST00000502527 KCNK9Q9NPC2 374 aa17.49■□□□□ 0.39
VCAN-204ENST00000502527 CTNNAL1Q9UBT7 734 aa17.49■□□□□ 0.39
VCAN-204ENST00000502527 LRRD1A4D1F6 860 aa17.48■□□□□ 0.39
VCAN-204ENST00000502527 DNM1LO00429 736 aa17.48■□□□□ 0.39
VCAN-204ENST00000502527 CDKN2BP42772 138 aa17.48■□□□□ 0.39
VCAN-204ENST00000502527 VCPP55072 806 aaKnown RBP17.48■□□□□ 0.39
VCAN-204ENST00000502527 CYP4A22Q5TCH4 519 aa17.48■□□□□ 0.39
VCAN-204ENST00000502527 CHADLQ6NUI6 762 aa17.48■□□□□ 0.39
VCAN-204ENST00000502527 DLK2Q6UY11 383 aa17.48■□□□□ 0.39
VCAN-204ENST00000502527 PRUNE1Q86TP1 453 aa17.48■□□□□ 0.39
VCAN-204ENST00000502527 NKD2Q969F2 451 aaPredicted RBP17.48■□□□□ 0.39
VCAN-204ENST00000502527 CFAP57Q96MR6 1250 aa17.48■□□□□ 0.39
VCAN-204ENST00000502527 ELAC2Q9BQ52 826 aaKnown RBP17.48■□□□□ 0.39
VCAN-204ENST00000502527 SGIP1Q9BQI5 828 aa17.48■□□□□ 0.39
VCAN-204ENST00000502527 ELP3Q9H9T3 547 aa17.48■□□□□ 0.39
VCAN-204ENST00000502527 NXF1Q9UBU9 619 aaKnown RBP17.48■□□□□ 0.39
VCAN-204ENST00000502527 TPX2Q9ULW0 747 aaKnown RBP17.48■□□□□ 0.39
VCAN-204ENST00000502527 NAALADL1Q9UQQ1 740 aa17.48■□□□□ 0.39
VCAN-204ENST00000502527 CXCL11O14625 94 aa17.48■□□□□ 0.39
VCAN-204ENST00000502527 BRAFP15056 766 aa17.48■□□□□ 0.39
VCAN-204ENST00000502527 CD19P15391 556 aa17.48■□□□□ 0.39
VCAN-204ENST00000502527 OSTNP61366 133 aa17.48■□□□□ 0.39
VCAN-204ENST00000502527 KCTD2Q14681 263 aa17.48■□□□□ 0.39
VCAN-204ENST00000502527 DENND1BQ6P3S1 775 aa17.48■□□□□ 0.39
VCAN-204ENST00000502527 SULF1Q8IWU6 871 aa17.48■□□□□ 0.39
VCAN-204ENST00000502527 SUGP1Q8IWZ8 645 aaKnown RBP17.48■□□□□ 0.39
VCAN-204ENST00000502527 RIBC1Q8N443 379 aaPredicted RBP17.48■□□□□ 0.39
VCAN-204ENST00000502527 MGARPQ8TDB4 240 aa17.48■□□□□ 0.39
VCAN-204ENST00000502527 DCPSQ96C86 337 aaKnown RBP17.48■□□□□ 0.39
VCAN-204ENST00000502527 OTUD5Q96G74 571 aa17.48■□□□□ 0.39
VCAN-204ENST00000502527 FAXDC2Q96IV6 333 aa17.48■□□□□ 0.39
VCAN-204ENST00000502527 FGD4Q96M96 766 aa17.48■□□□□ 0.39
VCAN-204ENST00000502527 TTC25Q96NG3 672 aa17.48■□□□□ 0.39
VCAN-204ENST00000502527 RPF1Q9H9Y2 349 aaKnown RBP17.48■□□□□ 0.39
VCAN-204ENST00000502527 ACTL7BQ9Y614 415 aa17.48■□□□□ 0.39
VCAN-204ENST00000502527 SIGLEC16A6NMB1 481 aa17.47■□□□□ 0.39
VCAN-204ENST00000502527 HBP1O60381 514 aa17.47■□□□□ 0.39
VCAN-204ENST00000502527 ITGAVP06756 1048 aa17.47■□□□□ 0.39
VCAN-204ENST00000502527 KRT3P12035 628 aa17.47■□□□□ 0.39
VCAN-204ENST00000502527 CREB1P16220 341 aa17.47■□□□□ 0.39
VCAN-204ENST00000502527 SCTRP47872 440 aa17.47■□□□□ 0.39
VCAN-204ENST00000502527 GPS1Q13098 491 aa17.47■□□□□ 0.39
VCAN-204ENST00000502527 MORF4L2Q15014 288 aa17.47■□□□□ 0.39
VCAN-204ENST00000502527 LRRC14Q15048 493 aa17.47■□□□□ 0.39
VCAN-204ENST00000502527 OASLQ15646 514 aaKnown RBP17.47■□□□□ 0.39
VCAN-204ENST00000502527 ZNF667Q5HYK9 610 aa17.47■□□□□ 0.39
VCAN-204ENST00000502527 EEF1DP3Q658K8 133 aa17.47■□□□□ 0.39
VCAN-204ENST00000502527 TXNRD3NBQ6F5E7 133 aa17.47■□□□□ 0.39
VCAN-204ENST00000502527 EFCAB12Q6NXP0 572 aa17.47■□□□□ 0.39
VCAN-204ENST00000502527 ERO1BQ86YB8 467 aa17.47■□□□□ 0.39
VCAN-204ENST00000502527 R3HDMLQ9H3Y0 253 aa17.47■□□□□ 0.39
VCAN-204ENST00000502527 SAYSD1Q9NPB0 183 aa17.47■□□□□ 0.39
VCAN-204ENST00000502527 TNFSF13BQ9Y275 285 aa17.47■□□□□ 0.39
VCAN-204ENST00000502527 EFR3BQ9Y2G0 817 aa17.47■□□□□ 0.39
VCAN-204ENST00000502527 B4GALT5O43286 388 aa17.46■□□□□ 0.39
VCAN-204ENST00000502527 KRT19P08727 400 aa17.46■□□□□ 0.39
VCAN-204ENST00000502527 KRT7P08729 469 aa17.46■□□□□ 0.39
VCAN-204ENST00000502527 ZSCAN5DPP0CG00 497 aa17.46■□□□□ 0.39
VCAN-204ENST00000502527 PSMA2P25787 234 aa17.46■□□□□ 0.39
VCAN-204ENST00000502527 MBTD1Q05BQ5 628 aa17.46■□□□□ 0.39
VCAN-204ENST00000502527 CCDC62Q6P9F0 684 aa17.46■□□□□ 0.39
VCAN-204ENST00000502527 CYP4X1Q8N118 509 aa17.46■□□□□ 0.39
VCAN-204ENST00000502527 ANKRD42Q8N9B4 389 aa17.46■□□□□ 0.39
VCAN-204ENST00000502527 GLIS1Q8NBF1 620 aa17.46■□□□□ 0.39
VCAN-204ENST00000502527 TRAPPC12Q8WVT3 735 aa17.46■□□□□ 0.39
VCAN-204ENST00000502527 MMP19Q99542 508 aa17.46■□□□□ 0.39
VCAN-204ENST00000502527 BCO2Q9BYV7 579 aa17.46■□□□□ 0.39
VCAN-204ENST00000502527 CDT1Q9H211 546 aa17.46■□□□□ 0.39
VCAN-204ENST00000502527 WDR35Q9P2L0 1181 aa17.46■□□□□ 0.39
VCAN-204ENST00000502527 POLIQ9UNA4 740 aa17.46■□□□□ 0.39
VCAN-204ENST00000502527 AGTPBP1Q9UPW5 1226 aa17.46■□□□□ 0.39
VCAN-204ENST00000502527 PTPRFP10586 1907 aa17.46■□□□□ 0.39
VCAN-204ENST00000502527 DNAJC25-GNG10A0A024R161 153 aa17.46■□□□□ 0.39
VCAN-204ENST00000502527 ADM5C9JUS6 153 aa17.46■□□□□ 0.39
VCAN-204ENST00000502527 GOLGA8SH3BPF8 625 aa17.46■□□□□ 0.39
VCAN-204ENST00000502527 GJB1P08034 283 aa17.46■□□□□ 0.39
VCAN-204ENST00000502527 RFC1P35251 1148 aaPredicted RBP17.46■□□□□ 0.39
VCAN-204ENST00000502527 PLCB3Q01970 1234 aa17.46■□□□□ 0.39
VCAN-204ENST00000502527 NR1H3Q13133 447 aa17.46■□□□□ 0.39
VCAN-204ENST00000502527 HADHQ16836 314 aaKnown RBP17.46■□□□□ 0.39
VCAN-204ENST00000502527 SPRED3Q2MJR0 410 aa17.46■□□□□ 0.39
VCAN-204ENST00000502527 PTPN20Q4JDL3 420 aa17.46■□□□□ 0.39
VCAN-204ENST00000502527 CYP4F22Q6NT55 531 aa17.46■□□□□ 0.39
VCAN-204ENST00000502527 CEP120Q8N960 986 aa17.46■□□□□ 0.39
VCAN-204ENST00000502527 FNIP1Q8TF40 1166 aa17.46■□□□□ 0.39
VCAN-204ENST00000502527 ACSF2Q96CM8 615 aaPredicted RBP17.46■□□□□ 0.39
VCAN-204ENST00000502527 FRMD8P1Q9BZ68 369 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms