RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 LTBRP36941 435 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 WDR4P57081 412 aaKnown RBP4.03□□□□□ -1.76
SUB1-202ENST00000502453 SPEM2Q0P670 501 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 BOLA3Q53S33 107 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 DCAF17Q5H9S7 520 aaPredicted RBP4.03□□□□□ -1.76
SUB1-202ENST00000502453 ANGEL2Q5VTE6 544 aaKnown RBP4.03□□□□□ -1.76
SUB1-202ENST00000502453 PRAMEF13Q5VWM6 474 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 UNC13DQ70J99 1090 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 SPATA2LQ8IUW3 424 aaPredicted RBP4.03□□□□□ -1.76
SUB1-202ENST00000502453 TMEM57Q8N5G2 664 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 GLIS1Q8NBF1 620 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 SGCDQ92629 289 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 PTP4A1Q93096 173 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 RNF166Q96A37 237 aaPredicted RBP4.03□□□□□ -1.76
SUB1-202ENST00000502453 WDR18Q9BV38 432 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 PACSIN1Q9BY11 444 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 ACTR3BQ9P1U1 418 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 C5AR2Q9P296 337 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 AFF4Q9UHB7 1163 aaKnown RBP4.03□□□□□ -1.76
SUB1-202ENST00000502453 NAALADL1Q9UQQ1 740 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 HS3ST4Q9Y661 456 aa4.03□□□□□ -1.76
SUB1-202ENST00000502453 SGK1O00141 431 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 TNFRSF10AO00220 468 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 SOX1O00570 391 aaPredicted RBP4.02□□□□□ -1.77
SUB1-202ENST00000502453 ATXN7O15265 892 aaPredicted RBP4.02□□□□□ -1.77
SUB1-202ENST00000502453 PLS3P13797 630 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 GNAT2P19087 354 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 GRK3P35626 688 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 CENPAP49450 140 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 VAMP2P63027 116 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 DRICH1Q6PGQ1 229 aaPredicted RBP4.02□□□□□ -1.77
SUB1-202ENST00000502453 PLEKHM3Q6ZWE6 761 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 CDH24Q86UP0 819 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 CCDC150Q8NCX0 1101 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 HDAC10Q969S8 669 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 C3orf49Q96BT1 292 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 MFSD14AQ96MC6 490 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 ABHD1Q96SE0 405 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 P2RX7Q99572 595 aaKnown RBP4.02□□□□□ -1.77
SUB1-202ENST00000502453 MCMBPQ9BTE3 642 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 COL20A1Q9P218 1284 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 PTBP2Q9UKA9 531 aaKnown RBP4.02□□□□□ -1.77
SUB1-202ENST00000502453 WASF2Q9Y6W5 498 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 TDRD9Q8NDG6 1382 aaKnown RBP4.02□□□□□ -1.77
SUB1-202ENST00000502453 H0YHG0 523 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 SYNCRIPO60506 623 aaKnown RBP4.02□□□□□ -1.77
SUB1-202ENST00000502453 SCGB1D1O95968 90 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 SCG5P05408 212 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 ALADP13716 330 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 GSPT1P15170 499 aaKnown RBP4.02□□□□□ -1.77
SUB1-202ENST00000502453 NPR1P16066 1061 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 USP11P51784 963 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 AP2B1P63010 937 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 SARNPP82979 210 aaKnown RBP4.02□□□□□ -1.77
SUB1-202ENST00000502453 PDIA5Q14554 519 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 PPP1R7Q15435 360 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 NR0B2Q15466 257 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 GEN1Q17RS7 908 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 KHDC1LQ5JSQ8 128 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 PRAMEF14Q5SWL7 426 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 HEATR3Q7Z4Q2 680 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 NLRP10Q86W26 655 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 FRMD1Q8N878 549 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 RFWD2Q8NHY2 731 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 CPT1CQ8TCG5 803 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 NOC3LQ8WTT2 800 aaKnown RBP4.02□□□□□ -1.77
SUB1-202ENST00000502453 ZNF653Q96CK0 615 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 SNX22Q96L94 193 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 ZFYVE21Q9BQ24 234 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 C1orf21Q9H246 121 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 TTYH1Q9H313 450 aaPredicted RBP4.02□□□□□ -1.77
SUB1-202ENST00000502453 SOX13Q9UN79 622 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 JRKLQ9Y4A0 524 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 TRAV34A0A0B4J273 112 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 A0A1B0GTH6 734 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 SYCE3A1L190 88 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 CCDC78A2IDD5 438 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 ARNTLO00327 626 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 IKBKBO14920 756 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 HNRNPDLO14979 420 aaKnown RBP4.02□□□□□ -1.77
SUB1-202ENST00000502453 A1BGP04217 495 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 QDPRP09417 244 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 GHRP10912 638 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 CPB1P15086 417 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 IL12RB1P42701 662 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 MANFP55145 182 aaKnown RBP4.02□□□□□ -1.77
SUB1-202ENST00000502453 GSCP56915 257 aaPredicted RBP4.02□□□□□ -1.77
SUB1-202ENST00000502453 CABP4P57796 275 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 ATP8B2P98198 1209 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 FOXC1Q12948 553 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 KYNUQ16719 465 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 KRBOX4Q5JUW0 171 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 AKNAD1Q5T1N1 836 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 ARHGAP36Q6ZRI8 547 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 Q6ZVU0 165 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 MIGA2Q7L4E1 593 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 TMEM110Q86TL2 294 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 METTL23Q86XA0 190 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 SCML4Q8N228 414 aa4.02□□□□□ -1.77
SUB1-202ENST00000502453 CTCFLQ8NI51 663 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms