RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 DMC1Q14565 340 aa12.66□□□□□ -0.38
CDK9-205ENST00000498339 ANKRD1Q15327 319 aa12.66□□□□□ -0.38
CDK9-205ENST00000498339 FBXO43Q4G163 708 aa12.66□□□□□ -0.38
CDK9-205ENST00000498339 TTC30AQ86WT1 665 aa12.66□□□□□ -0.38
CDK9-205ENST00000498339 CMTM8Q8IZV2 173 aa12.66□□□□□ -0.38
CDK9-205ENST00000498339 MAB21L3Q8N8X9 362 aa12.66□□□□□ -0.38
CDK9-205ENST00000498339 TSTD1Q8NFU3 115 aa12.66□□□□□ -0.38
CDK9-205ENST00000498339 FAM212AQ96EL1 285 aa12.66□□□□□ -0.38
CDK9-205ENST00000498339 CHFRQ96EP1 664 aa12.66□□□□□ -0.38
CDK9-205ENST00000498339 P2RY13Q9BPV8 354 aa12.66□□□□□ -0.38
CDK9-205ENST00000498339 SLC46A2Q9BY10 475 aa12.66□□□□□ -0.38
CDK9-205ENST00000498339 LRWD1Q9UFC0 647 aa12.66□□□□□ -0.38
CDK9-205ENST00000498339 CCL26Q9Y258 94 aa12.66□□□□□ -0.38
CDK9-205ENST00000498339 SCN1AP35498 2009 aa12.66□□□□□ -0.38
CDK9-205ENST00000498339 TNRC6BQ9UPQ9 1833 aaKnown RBP12.65□□□□□ -0.38
CDK9-205ENST00000498339 CEP192Q8TEP8 1941 aa12.65□□□□□ -0.38
CDK9-205ENST00000498339 SOBPA7XYQ1 873 aa12.65□□□□□ -0.38
CDK9-205ENST00000498339 PATE3B3GLJ2 98 aa12.65□□□□□ -0.38
CDK9-205ENST00000498339 EPB41L2O43491 1005 aaKnown RBP12.65□□□□□ -0.38
CDK9-205ENST00000498339 HYAL3O43820 417 aaPredicted RBP12.65□□□□□ -0.38
CDK9-205ENST00000498339 JAK2O60674 1132 aa12.65□□□□□ -0.38
CDK9-205ENST00000498339 ATF6P18850 670 aa12.65□□□□□ -0.38
CDK9-205ENST00000498339 TYMPP19971 482 aa12.65□□□□□ -0.38
CDK9-205ENST00000498339 CSRP1P21291 193 aaKnown RBP12.65□□□□□ -0.38
CDK9-205ENST00000498339 NMT1P30419 496 aaKnown RBP12.65□□□□□ -0.38
CDK9-205ENST00000498339 DHPSP49366 369 aaPredicted RBP12.65□□□□□ -0.38
CDK9-205ENST00000498339 RAD51AP2Q09MP3 1159 aa12.65□□□□□ -0.38
CDK9-205ENST00000498339 GNL2Q13823 731 aaKnown RBP12.65□□□□□ -0.38
CDK9-205ENST00000498339 USP39Q53GS9 565 aaKnown RBP12.65□□□□□ -0.38
CDK9-205ENST00000498339 SYT13Q7L8C5 426 aa12.65□□□□□ -0.38
CDK9-205ENST00000498339 C11orf74Q86VG3 221 aa12.65□□□□□ -0.38
CDK9-205ENST00000498339 DAW1Q8N136 415 aa12.65□□□□□ -0.38
CDK9-205ENST00000498339 CPA6Q8N4T0 437 aa12.65□□□□□ -0.38
CDK9-205ENST00000498339 GATA6Q92908 595 aa12.65□□□□□ -0.38
CDK9-205ENST00000498339 GTF3C6Q969F1 213 aa12.65□□□□□ -0.38
CDK9-205ENST00000498339 FAM83CQ9BQN1 747 aa12.65□□□□□ -0.38
CDK9-205ENST00000498339 TMEM121BQ9BXQ6 578 aaPredicted RBP12.65□□□□□ -0.38
CDK9-205ENST00000498339 KIF9Q9HAQ2 790 aa12.65□□□□□ -0.38
CDK9-205ENST00000498339 ABI2Q9NYB9 513 aaPredicted RBP12.65□□□□□ -0.38
CDK9-205ENST00000498339 ZMYM5Q9UJ78 669 aa12.65□□□□□ -0.38
CDK9-205ENST00000498339 DNM3Q9UQ16 869 aa12.65□□□□□ -0.38
CDK9-205ENST00000498339 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.65□□□□□ -0.38
CDK9-205ENST00000498339 ASCC3Q8N3C0 2202 aaKnown RBP12.65□□□□□ -0.38
CDK9-205ENST00000498339 AKAP13Q12802 2813 aa12.65□□□□□ -0.38
CDK9-205ENST00000498339 PTPRDP23468 1912 aa12.64□□□□□ -0.39
CDK9-205ENST00000498339 OTOL1A6NHN0 477 aaPredicted RBP12.64□□□□□ -0.39
CDK9-205ENST00000498339 SFI1A8K8P3 1242 aa12.64□□□□□ -0.39
CDK9-205ENST00000498339 E9PMD0 336 aa12.64□□□□□ -0.39
CDK9-205ENST00000498339 CLTAP09496 248 aa12.64□□□□□ -0.39
CDK9-205ENST00000498339 WEE1P30291 646 aa12.64□□□□□ -0.39
CDK9-205ENST00000498339 TNFSF9P41273 254 aa12.64□□□□□ -0.39
CDK9-205ENST00000498339 MAPK8P45983 427 aa12.64□□□□□ -0.39
CDK9-205ENST00000498339 AARSP49588 968 aaKnown RBP eCLIP12.64□□□□□ -0.39
CDK9-205ENST00000498339 GALK1P51570 392 aa12.64□□□□□ -0.39
CDK9-205ENST00000498339 SMTNP53814 917 aa12.64□□□□□ -0.39
CDK9-205ENST00000498339 ZRSR1Q15695 479 aaKnown RBP12.64□□□□□ -0.39
CDK9-205ENST00000498339 TTC38Q5R3I4 469 aa12.64□□□□□ -0.39
CDK9-205ENST00000498339 PMS2CLQ68D20 193 aa12.64□□□□□ -0.39
CDK9-205ENST00000498339 NAIF1Q69YI7 327 aaPredicted RBP12.64□□□□□ -0.39
CDK9-205ENST00000498339 LRSAM1Q6UWE0 723 aa12.64□□□□□ -0.39
CDK9-205ENST00000498339 METTL23Q86XA0 190 aa12.64□□□□□ -0.39
CDK9-205ENST00000498339 NSUN7Q8NE18 718 aaKnown RBP12.64□□□□□ -0.39
CDK9-205ENST00000498339 OR10T2Q8NGX3 314 aa12.64□□□□□ -0.39
CDK9-205ENST00000498339 PIGKQ92643 395 aa12.64□□□□□ -0.39
CDK9-205ENST00000498339 MRPS31Q92665 395 aaKnown RBP12.64□□□□□ -0.39
CDK9-205ENST00000498339 USP13Q92995 863 aaPredicted RBP12.64□□□□□ -0.39
CDK9-205ENST00000498339 SENP8Q96LD8 212 aa12.64□□□□□ -0.39
CDK9-205ENST00000498339 RUSC1Q9BVN2 902 aa12.64□□□□□ -0.39
CDK9-205ENST00000498339 RAB34Q9BZG1 259 aa12.64□□□□□ -0.39
CDK9-205ENST00000498339 SLC32A1Q9H598 525 aa12.64□□□□□ -0.39
CDK9-205ENST00000498339 C17orf75Q9HAS0 396 aa12.64□□□□□ -0.39
CDK9-205ENST00000498339 PLEKHA5Q9HAU0 1116 aa12.64□□□□□ -0.39
CDK9-205ENST00000498339 IL21Q9HBE4 155 aa12.64□□□□□ -0.39
CDK9-205ENST00000498339 FBRSL1Q9HCM7 1045 aaKnown RBP12.64□□□□□ -0.39
CDK9-205ENST00000498339 TDP1Q9NUW8 608 aa12.64□□□□□ -0.39
CDK9-205ENST00000498339 MAGED2Q9UNF1 606 aaPredicted RBP12.64□□□□□ -0.39
CDK9-205ENST00000498339 WASF3Q9UPY6 502 aa12.64□□□□□ -0.39
CDK9-205ENST00000498339 DMXL2Q8TDJ6 3036 aa12.64□□□□□ -0.39
CDK9-205ENST00000498339 PI4KAP42356 2102 aa12.64□□□□□ -0.39
CDK9-205ENST00000498339 ZFYVE26Q68DK2 2539 aa12.63□□□□□ -0.39
CDK9-205ENST00000498339 NBEAQ8NFP9 2946 aa12.63□□□□□ -0.39
CDK9-205ENST00000498339 ADAMTS20P59510 1910 aa12.63□□□□□ -0.39
CDK9-205ENST00000498339 ANAPC1Q9H1A4 1944 aa12.63□□□□□ -0.39
CDK9-205ENST00000498339 PPEF2O14830 753 aa12.63□□□□□ -0.39
CDK9-205ENST00000498339 CYP3A5P20815 502 aa12.63□□□□□ -0.39
CDK9-205ENST00000498339 DDX6P26196 483 aaKnown RBP eCLIP12.63□□□□□ -0.39
CDK9-205ENST00000498339 GJA4P35212 333 aa12.63□□□□□ -0.39
CDK9-205ENST00000498339 IFNAR2P48551 515 aa12.63□□□□□ -0.39
CDK9-205ENST00000498339 FXR2P51116 673 aaKnown RBP eCLIP12.63□□□□□ -0.39
CDK9-205ENST00000498339 SEC13P55735 322 aa12.63□□□□□ -0.39
CDK9-205ENST00000498339 MCL1Q07820 350 aa12.63□□□□□ -0.39
CDK9-205ENST00000498339 ORC2Q13416 577 aaPredicted RBP12.63□□□□□ -0.39
CDK9-205ENST00000498339 PDGFRLQ15198 375 aa12.63□□□□□ -0.39
CDK9-205ENST00000498339 ME3Q16798 604 aa12.63□□□□□ -0.39
CDK9-205ENST00000498339 KRT79Q5XKE5 535 aa12.63□□□□□ -0.39
CDK9-205ENST00000498339 TXNDC8Q6A555 127 aa12.63□□□□□ -0.39
CDK9-205ENST00000498339 ANO7Q6IWH7 933 aa12.63□□□□□ -0.39
CDK9-205ENST00000498339 CD101Q93033 1021 aa12.63□□□□□ -0.39
CDK9-205ENST00000498339 NUSAP1Q9BXS6 441 aaKnown RBP12.63□□□□□ -0.39
CDK9-205ENST00000498339 RPF1Q9H9Y2 349 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms