RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 GOLGA2P5Q9HBQ8 144 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 ABCB6Q9NP58 842 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 STARD7Q9NQZ5 370 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 RNF14Q9UBS8 474 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 CHORDC1Q9UHD1 332 aaPredicted RBP8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 BARX2Q9UMQ3 279 aaPredicted RBP8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 ST3GAL5Q9UNP4 418 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 SNX9Q9Y5X1 595 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 OBSL1O75147 1896 aa8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 SMIM28A0A1B0GU29 152 aa8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 DPYSL4O14531 572 aa8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 DDX3YO15523 660 aaKnown RBP8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 CEP104O60308 925 aa8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 H2AFXP16104 143 aaPredicted RBP8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 CYP3A5P20815 502 aa8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 IBSPP21815 317 aaPredicted RBP8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 COMTP21964 271 aa8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 CD52P31358 61 aa8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 CDH5P33151 784 aaPredicted RBP8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 NDST1P52848 882 aa8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 SOX4Q06945 474 aaPredicted RBP8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 ZBTB6Q15916 424 aa8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 TRIM71Q2Q1W2 868 aaKnown RBP8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 C2CD6Q53TS8 623 aa8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 SGO2Q562F6 1265 aa8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 XKR4Q5GH76 650 aa8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 LLGL2Q6P1M3 1020 aa8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 ALKAL1Q6UXT8 129 aa8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 MTERF4Q7Z6M4 381 aaKnown RBP8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 ARRDC4Q8NCT1 418 aa8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 IPO4Q8TEX9 1081 aaKnown RBP8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 TFAP2BQ92481 460 aa8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 TMEM176AQ96HP8 235 aa8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 MS4A14Q96JA4 679 aa8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 VCPIP1Q96JH7 1222 aa8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 BTBD6Q96KE9 485 aa8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 NT5C1AQ9BXI3 368 aa8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 ZNF518BQ9C0D4 1074 aa8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 CARD9Q9H257 536 aa8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 ANKZF1Q9H8Y5 726 aa8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 MRPL47Q9HD33 250 aaKnown RBP8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 CHST12Q9NRB3 414 aa8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 RBM12Q9NTZ6 932 aaKnown RBP8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 RNF19AQ9NV58 838 aa8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 SLC38A7Q9NVC3 462 aa8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 STRIP2Q9ULQ0 834 aa8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.57□□□□□ -1.04
PDZRN3-212ENST00000498048 GOLGA6L10A0A0M3HER8 536 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 O00370 1275 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 PTGESO14684 152 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 MICAL2O94851 1124 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 VDRP11473 427 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 MMP8P22894 467 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 CTNNA2P26232 953 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 CTNNA1P35221 906 aaKnown RBP8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 MARCKSL1P49006 195 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 PTP4A2Q12974 167 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 LPIN1Q14693 890 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 STILQ15468 1287 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 GOLGA7BQ2TAP0 167 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 PTPN20Q4JDL3 420 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 FAM26DQ5JW98 314 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 CYP4A22Q5TCH4 519 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 DCAF12L1Q5VU92 463 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 DENND1BQ6P3S1 775 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 DPH6Q7L8W6 267 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 PHLDB2Q86SQ0 1253 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 ADGRF2Q8IZF7 708 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 MMGT1Q8N4V1 131 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 USP38Q8NB14 1042 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 SPATA4Q8NEY3 305 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 ACTRT1Q8TDG2 376 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 SH3TC2Q8TF17 1288 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 WHAMMQ8TF30 809 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 RUBCNQ92622 972 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 LPPQ93052 612 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 RNPC3Q96LT9 517 aaKnown RBP8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 ZFP42Q96MM3 310 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 MCEEQ96PE7 176 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 PPP1R10Q96QC0 940 aaKnown RBP8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 PNKPQ96T60 521 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 MRPL45Q9BRJ2 306 aaKnown RBP8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 BEGAINQ9BUH8 593 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 DNAI2Q9GZS0 605 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 WNT8AQ9H1J5 351 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 EPC1Q9H2F5 836 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 SYNCQ9H7C4 482 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 AGO3Q9H9G7 860 aaKnown RBP8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 PADI3Q9ULW8 664 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 PHF24Q9UPV7 400 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 CENPFP49454 3210 aa8.56□□□□□ -1.04
PDZRN3-212ENST00000498048 GBF1Q92538 1859 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 PLXNA4Q9HCM2 1894 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 MIA3Q5JRA6 1907 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 TARSL2A2RTX5 802 aaKnown RBP8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 CCDC66A2RUB6 948 aa8.55□□□□□ -1.04
PDZRN3-212ENST00000498048 CCDC151A5D8V7 595 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms