RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 MCM7P33993 719 aa17.91■□□□□ 0.46
VIM-208ENST00000497849 PI4KAP42356 2102 aa17.91■□□□□ 0.46
VIM-208ENST00000497849 DGKEP52429 567 aa17.91■□□□□ 0.46
VIM-208ENST00000497849 ZBTB6Q15916 424 aa17.91■□□□□ 0.46
VIM-208ENST00000497849 FBXO43Q4G163 708 aa17.91■□□□□ 0.46
VIM-208ENST00000497849 OVOS1Q6IE37 1185 aa17.91■□□□□ 0.46
VIM-208ENST00000497849 TMEM150AQ86TG1 271 aa17.91■□□□□ 0.46
VIM-208ENST00000497849 DIS3L2Q8IYB7 885 aaKnown RBP17.91■□□□□ 0.46
VIM-208ENST00000497849 ERMNQ8TAM6 284 aa17.91■□□□□ 0.46
VIM-208ENST00000497849 WASF1Q92558 559 aa17.91■□□□□ 0.46
VIM-208ENST00000497849 USP13Q92995 863 aaPredicted RBP17.91■□□□□ 0.46
VIM-208ENST00000497849 TNRC6BQ9UPQ9 1833 aaKnown RBP17.91■□□□□ 0.46
VIM-208ENST00000497849 GON4LQ3T8J9 2241 aa17.9■□□□□ 0.46
VIM-208ENST00000497849 REC8O95072 547 aa17.9■□□□□ 0.46
VIM-208ENST00000497849 CXCL8P10145 99 aa17.9■□□□□ 0.46
VIM-208ENST00000497849 TYMPP19971 482 aa17.9■□□□□ 0.46
VIM-208ENST00000497849 MUTP22033 750 aa17.9■□□□□ 0.46
VIM-208ENST00000497849 GJA4P35212 333 aa17.9■□□□□ 0.46
VIM-208ENST00000497849 CDR1P51861 262 aa17.9■□□□□ 0.46
VIM-208ENST00000497849 AMPD2Q01433 879 aa17.9■□□□□ 0.46
VIM-208ENST00000497849 SOWAHCQ53LP3 525 aaPredicted RBP17.9■□□□□ 0.46
VIM-208ENST00000497849 DSTYKQ6XUX3 929 aa17.9■□□□□ 0.46
VIM-208ENST00000497849 CYP2U1Q7Z449 544 aa17.9■□□□□ 0.46
VIM-208ENST00000497849 OR10T2Q8NGX3 314 aa17.9■□□□□ 0.46
VIM-208ENST00000497849 SEPT5Q99719 369 aaPredicted RBP17.9■□□□□ 0.46
VIM-208ENST00000497849 TPSD1Q9BZJ3 242 aa17.9■□□□□ 0.46
VIM-208ENST00000497849 PPEF2O14830 753 aa17.89■□□□□ 0.45
VIM-208ENST00000497849 GUCY2FP51841 1108 aa17.89■□□□□ 0.45
VIM-208ENST00000497849 USP39Q53GS9 565 aaKnown RBP17.89■□□□□ 0.45
VIM-208ENST00000497849 C11orf74Q86VG3 221 aa17.89■□□□□ 0.45
VIM-208ENST00000497849 MAB21L3Q8N8X9 362 aa17.89■□□□□ 0.45
VIM-208ENST00000497849 ACDQ96AP0 544 aa17.89■□□□□ 0.45
VIM-208ENST00000497849 KMT5AQ9NQR1 393 aa17.89■□□□□ 0.45
VIM-208ENST00000497849 ANKFY1Q9P2R3 1169 aa17.89■□□□□ 0.45
VIM-208ENST00000497849 FLNBO75369 2602 aaKnown RBP17.89■□□□□ 0.45
VIM-208ENST00000497849 CELSR3Q9NYQ7 3312 aa17.89■□□□□ 0.45
VIM-208ENST00000497849 SPAARA0A1B0GVQ0 90 aa17.88■□□□□ 0.45
VIM-208ENST00000497849 TTC26A0AVF1 554 aa17.88■□□□□ 0.45
VIM-208ENST00000497849 TOM1L1O75674 476 aa17.88■□□□□ 0.45
VIM-208ENST00000497849 CYP3A5P20815 502 aa17.88■□□□□ 0.45
VIM-208ENST00000497849 NMT1P30419 496 aaKnown RBP17.88■□□□□ 0.45
VIM-208ENST00000497849 AVPR1AP37288 418 aa17.88■□□□□ 0.45
VIM-208ENST00000497849 TUFMP49411 452 aaKnown RBP17.88■□□□□ 0.45
VIM-208ENST00000497849 MAPK7Q13164 816 aa17.88■□□□□ 0.45
VIM-208ENST00000497849 DMP1Q13316 513 aaPredicted RBP17.88■□□□□ 0.45
VIM-208ENST00000497849 NOLC1Q14978 699 aaKnown RBP eCLIP17.88■□□□□ 0.45
VIM-208ENST00000497849 VEPH1Q14D04 833 aa17.88■□□□□ 0.45
VIM-208ENST00000497849 MGAT5BQ3V5L5 792 aa17.88■□□□□ 0.45
VIM-208ENST00000497849 ARMCX5Q6P1M9 558 aa17.88■□□□□ 0.45
VIM-208ENST00000497849 RASSF3Q86WH2 238 aa17.88■□□□□ 0.45
VIM-208ENST00000497849 PROSER1Q86XN7 944 aa17.88■□□□□ 0.45
VIM-208ENST00000497849 TSTD1Q8NFU3 115 aa17.88■□□□□ 0.45
VIM-208ENST00000497849 GIPC2Q8TF65 315 aa17.88■□□□□ 0.45
VIM-208ENST00000497849 PIGKQ92643 395 aa17.88■□□□□ 0.45
VIM-208ENST00000497849 KIF12Q96FN5 646 aa17.88■□□□□ 0.45
VIM-208ENST00000497849 GCNAQ96QF7 691 aa17.88■□□□□ 0.45
VIM-208ENST00000497849 HAPLN2Q9GZV7 340 aa17.88■□□□□ 0.45
VIM-208ENST00000497849 TDP1Q9NUW8 608 aa17.88■□□□□ 0.45
VIM-208ENST00000497849 EVLQ9UI08 416 aaPredicted RBP17.88■□□□□ 0.45
VIM-208ENST00000497849 ZMYM5Q9UJ78 669 aa17.88■□□□□ 0.45
VIM-208ENST00000497849 GPSM3Q9Y4H4 160 aa17.88■□□□□ 0.45
VIM-208ENST00000497849 FAM221BA6H8Z2 402 aa17.87■□□□□ 0.45
VIM-208ENST00000497849 HIP1RO75146 1068 aa17.87■□□□□ 0.45
VIM-208ENST00000497849 SEC24BO95487 1268 aa17.87■□□□□ 0.45
VIM-208ENST00000497849 F11P03951 625 aa17.87■□□□□ 0.45
VIM-208ENST00000497849 OR52Z1P0C646 297 aa17.87■□□□□ 0.45
VIM-208ENST00000497849 CCT6AP40227 531 aaKnown RBP17.87■□□□□ 0.45
VIM-208ENST00000497849 DHPSP49366 369 aaPredicted RBP17.87■□□□□ 0.45
VIM-208ENST00000497849 BFSP1Q12934 665 aa17.87■□□□□ 0.45
VIM-208ENST00000497849 PSMD2Q13200 908 aa17.87■□□□□ 0.45
VIM-208ENST00000497849 SLC39A12Q504Y0 691 aa17.87■□□□□ 0.45
VIM-208ENST00000497849 HAUS3Q68CZ6 603 aa17.87■□□□□ 0.45
VIM-208ENST00000497849 PIP4P1Q86T03 277 aa17.87■□□□□ 0.45
VIM-208ENST00000497849 CD101Q93033 1021 aa17.87■□□□□ 0.45
VIM-208ENST00000497849 SLC32A1Q9H598 525 aa17.87■□□□□ 0.45
VIM-208ENST00000497849 ECT2Q9H8V3 914 aa17.87■□□□□ 0.45
VIM-208ENST00000497849 KIF9Q9HAQ2 790 aa17.87■□□□□ 0.45
VIM-208ENST00000497849 PLEKHA5Q9HAU0 1116 aa17.87■□□□□ 0.45
VIM-208ENST00000497849 UBQLN1Q9UMX0 589 aaKnown RBP17.87■□□□□ 0.45
VIM-208ENST00000497849 KIAA1024Q9UPX6 916 aa17.87■□□□□ 0.45
VIM-208ENST00000497849 RBM19Q9Y4C8 960 aaKnown RBP17.87■□□□□ 0.45
VIM-208ENST00000497849 ADAMTS9Q9P2N4 1935 aa17.86■□□□□ 0.45
VIM-208ENST00000497849 ANTXRLA6NF34 631 aa17.86■□□□□ 0.45
VIM-208ENST00000497849 SLC16A4O15374 487 aa17.86■□□□□ 0.45
VIM-208ENST00000497849 HMGA1P17096 107 aaKnown RBP17.86■□□□□ 0.45
VIM-208ENST00000497849 FOSBP53539 338 aa17.86■□□□□ 0.45
VIM-208ENST00000497849 NLRP12P59046 1061 aa17.86■□□□□ 0.45
VIM-208ENST00000497849 LILRA4P59901 499 aa17.86■□□□□ 0.45
VIM-208ENST00000497849 SIM1P81133 766 aaPredicted RBP17.86■□□□□ 0.45
VIM-208ENST00000497849 PDGFRLQ15198 375 aa17.86■□□□□ 0.45
VIM-208ENST00000497849 TRIM61Q5EBN2 209 aa17.86■□□□□ 0.45
VIM-208ENST00000497849 TXNDC8Q6A555 127 aa17.86■□□□□ 0.45
VIM-208ENST00000497849 ANO7Q6IWH7 933 aa17.86■□□□□ 0.45
VIM-208ENST00000497849 CC2D1AQ6P1N0 951 aaPredicted RBP17.86■□□□□ 0.45
VIM-208ENST00000497849 C19orf48Q6RUI8 117 aa17.86■□□□□ 0.45
VIM-208ENST00000497849 SENP8Q96LD8 212 aa17.86■□□□□ 0.45
VIM-208ENST00000497849 CNOT6LQ96LI5 555 aaKnown RBP17.86■□□□□ 0.45
VIM-208ENST00000497849 ZCWPW1Q9H0M4 648 aa17.86■□□□□ 0.45
VIM-208ENST00000497849 TMEM74BQ9NUR3 256 aa17.86■□□□□ 0.45
VIM-208ENST00000497849 DDX19AQ9NUU7 478 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms