RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 LOC730098B7Z3J9 87 aa12.3□□□□□ -0.44
HLA-B-254ENST00000497377 TNFRSF10AO00220 468 aa12.3□□□□□ -0.44
HLA-B-254ENST00000497377 STX10O60499 249 aa12.3□□□□□ -0.44
HLA-B-254ENST00000497377 CST3P01034 146 aaPredicted RBP12.3□□□□□ -0.44
HLA-B-254ENST00000497377 C4BPAP04003 597 aaKnown RBP12.3□□□□□ -0.44
HLA-B-254ENST00000497377 BMP6P22004 513 aa12.3□□□□□ -0.44
HLA-B-254ENST00000497377 PCSK1P29120 753 aa12.3□□□□□ -0.44
HLA-B-254ENST00000497377 SSTR3P32745 418 aaPredicted RBP12.3□□□□□ -0.44
HLA-B-254ENST00000497377 GTF2H1P32780 548 aa12.3□□□□□ -0.44
HLA-B-254ENST00000497377 MYL7Q01449 175 aa12.3□□□□□ -0.44
HLA-B-254ENST00000497377 TSPY1Q01534 308 aa12.3□□□□□ -0.44
HLA-B-254ENST00000497377 ADCY1Q08828 1119 aa12.3□□□□□ -0.44
HLA-B-254ENST00000497377 NCOA4Q13772 614 aa12.3□□□□□ -0.44
HLA-B-254ENST00000497377 CAMK4Q16566 473 aa12.3□□□□□ -0.44
HLA-B-254ENST00000497377 ZACNQ401N2 412 aa12.3□□□□□ -0.44
HLA-B-254ENST00000497377 TDRD10Q5VZ19 366 aaKnown RBP12.3□□□□□ -0.44
HLA-B-254ENST00000497377 ANKRD40Q6AI12 368 aa12.3□□□□□ -0.44
HLA-B-254ENST00000497377 ISM2Q6H9L7 571 aa12.3□□□□□ -0.44
HLA-B-254ENST00000497377 LIMS2Q7Z4I7 341 aa12.3□□□□□ -0.44
HLA-B-254ENST00000497377 DCP1BQ8IZD4 617 aaKnown RBP12.3□□□□□ -0.44
HLA-B-254ENST00000497377 ADGRF2Q8IZF7 708 aa12.3□□□□□ -0.44
HLA-B-254ENST00000497377 PDCL2Q8N4E4 241 aa12.3□□□□□ -0.44
HLA-B-254ENST00000497377 C2orf15Q8WU43 125 aaKnown RBP12.3□□□□□ -0.44
HLA-B-254ENST00000497377 CEP63Q96MT8 703 aa12.3□□□□□ -0.44
HLA-B-254ENST00000497377 NECAB3Q96P71 396 aaPredicted RBP12.3□□□□□ -0.44
HLA-B-254ENST00000497377 ACBD6Q9BR61 282 aa12.3□□□□□ -0.44
HLA-B-254ENST00000497377 ZCWPW1Q9H0M4 648 aa12.3□□□□□ -0.44
HLA-B-254ENST00000497377 NUP62CLQ9H1M0 184 aa12.3□□□□□ -0.44
HLA-B-254ENST00000497377 WDR6Q9NNW5 1121 aaKnown RBP12.3□□□□□ -0.44
HLA-B-254ENST00000497377 L1RE1Q9UN81 338 aa12.3□□□□□ -0.44
HLA-B-254ENST00000497377 BDP1A6H8Y1 2624 aa12.29□□□□□ -0.44
HLA-B-254ENST00000497377 PPP1R3GB7ZBB8 358 aa12.29□□□□□ -0.44
HLA-B-254ENST00000497377 BIN1O00499 593 aa12.29□□□□□ -0.44
HLA-B-254ENST00000497377 GABRDO14764 452 aa12.29□□□□□ -0.44
HLA-B-254ENST00000497377 LRG1P02750 347 aa12.29□□□□□ -0.44
HLA-B-254ENST00000497377 WEE2P0C1S8 567 aa12.29□□□□□ -0.44
HLA-B-254ENST00000497377 P4HA1P13674 534 aa12.29□□□□□ -0.44
HLA-B-254ENST00000497377 PMS1P54277 932 aaKnown RBP12.29□□□□□ -0.44
HLA-B-254ENST00000497377 TNNC1P63316 161 aa12.29□□□□□ -0.44
HLA-B-254ENST00000497377 DLG4P78352 724 aa12.29□□□□□ -0.44
HLA-B-254ENST00000497377 PLD1Q13393 1074 aa12.29□□□□□ -0.44
HLA-B-254ENST00000497377 SOWAHAQ2M3V2 549 aa12.29□□□□□ -0.44
HLA-B-254ENST00000497377 SGSM1Q2NKQ1 1148 aa12.29□□□□□ -0.44
HLA-B-254ENST00000497377 RNF19BQ6ZMZ0 732 aa12.29□□□□□ -0.44
HLA-B-254ENST00000497377 SV2AQ7L0J3 742 aa12.29□□□□□ -0.44
HLA-B-254ENST00000497377 OTOP3Q7RTS5 596 aa12.29□□□□□ -0.44
HLA-B-254ENST00000497377 OR10T2Q8NGX3 314 aa12.29□□□□□ -0.44
HLA-B-254ENST00000497377 NELFBQ8WX92 580 aa12.29□□□□□ -0.44
HLA-B-254ENST00000497377 TAF4BQ92750 862 aa12.29□□□□□ -0.44
HLA-B-254ENST00000497377 ACSF2Q96CM8 615 aaPredicted RBP12.29□□□□□ -0.44
HLA-B-254ENST00000497377 FAM84AQ96KN4 292 aa12.29□□□□□ -0.44
HLA-B-254ENST00000497377 MMS19Q96T76 1030 aa12.29□□□□□ -0.44
HLA-B-254ENST00000497377 RTP3Q9BQQ7 232 aa12.29□□□□□ -0.44
HLA-B-254ENST00000497377 CYP4F11Q9HBI6 524 aa12.29□□□□□ -0.44
HLA-B-254ENST00000497377 METTL14Q9HCE5 456 aaKnown RBP12.29□□□□□ -0.44
HLA-B-254ENST00000497377 INSL5Q9Y5Q6 135 aa12.29□□□□□ -0.44
HLA-B-254ENST00000497377 CLUHO75153 1309 aa12.29□□□□□ -0.44
HLA-B-254ENST00000497377 MTMR11A4FU01 709 aa12.28□□□□□ -0.44
HLA-B-254ENST00000497377 BHMG1C9JSJ3 638 aaPredicted RBP12.28□□□□□ -0.44
HLA-B-254ENST00000497377 CCL16O15467 120 aa12.28□□□□□ -0.44
HLA-B-254ENST00000497377 TACC1O75410 805 aa12.28□□□□□ -0.44
HLA-B-254ENST00000497377 FGFR1OPO95684 399 aaKnown RBP12.28□□□□□ -0.44
HLA-B-254ENST00000497377 WARSP23381 471 aaKnown RBP12.28□□□□□ -0.44
HLA-B-254ENST00000497377 MYL6P60660 151 aa12.28□□□□□ -0.44
HLA-B-254ENST00000497377 PAK1Q13153 545 aa12.28□□□□□ -0.44
HLA-B-254ENST00000497377 NFE2Q16621 373 aaPredicted RBP12.28□□□□□ -0.44
HLA-B-254ENST00000497377 ZNF699Q32M78 642 aa12.28□□□□□ -0.44
HLA-B-254ENST00000497377 WDR72Q3MJ13 1102 aa12.28□□□□□ -0.44
HLA-B-254ENST00000497377 C1orf220Q5T0J3 134 aa12.28□□□□□ -0.44
HLA-B-254ENST00000497377 KLHL10Q6JEL2 608 aa12.28□□□□□ -0.44
HLA-B-254ENST00000497377 TTI2Q6NXR4 508 aa12.28□□□□□ -0.44
HLA-B-254ENST00000497377 FILIP1Q7Z7B0 1213 aa12.28□□□□□ -0.44
HLA-B-254ENST00000497377 ZDHHC14Q8IZN3 488 aa12.28□□□□□ -0.44
HLA-B-254ENST00000497377 ELMOD1Q8N336 334 aa12.28□□□□□ -0.44
HLA-B-254ENST00000497377 TDRD5Q8NAT2 981 aaKnown RBP12.28□□□□□ -0.44
HLA-B-254ENST00000497377 MLKLQ8NB16 471 aa12.28□□□□□ -0.44
HLA-B-254ENST00000497377 SPPL2BQ8TCT7 592 aa12.28□□□□□ -0.44
HLA-B-254ENST00000497377 RPGRIP1Q96KN7 1286 aa12.28□□□□□ -0.44
HLA-B-254ENST00000497377 IMPG2Q9BZV3 1241 aa12.28□□□□□ -0.44
HLA-B-254ENST00000497377 XYLT2Q9H1B5 865 aa12.28□□□□□ -0.44
HLA-B-254ENST00000497377 TMEM8AQ9HCN3 771 aa12.28□□□□□ -0.44
HLA-B-254ENST00000497377 DDX43Q9NXZ2 648 aaKnown RBP12.28□□□□□ -0.44
HLA-B-254ENST00000497377 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.28□□□□□ -0.44
HLA-B-254ENST00000497377 ARMCX3Q9UH62 379 aaPredicted RBP12.28□□□□□ -0.44
HLA-B-254ENST00000497377 CDH22Q9UJ99 828 aa12.28□□□□□ -0.44
HLA-B-254ENST00000497377 TRIM49BA6NDI0 452 aa12.27□□□□□ -0.45
HLA-B-254ENST00000497377 SEC24AO95486 1093 aa12.27□□□□□ -0.45
HLA-B-254ENST00000497377 VNN1O95497 513 aa12.27□□□□□ -0.45
HLA-B-254ENST00000497377 GNA14O95837 355 aa12.27□□□□□ -0.45
HLA-B-254ENST00000497377 MBD3O95983 291 aa12.27□□□□□ -0.45
HLA-B-254ENST00000497377 OR4Q2P0C623 313 aa12.27□□□□□ -0.45
HLA-B-254ENST00000497377 PIK3CAP42336 1068 aa12.27□□□□□ -0.45
HLA-B-254ENST00000497377 ALDH1A3P47895 512 aa12.27□□□□□ -0.45
HLA-B-254ENST00000497377 TUFMP49411 452 aaKnown RBP12.27□□□□□ -0.45
HLA-B-254ENST00000497377 DUSP4Q13115 394 aa12.27□□□□□ -0.45
HLA-B-254ENST00000497377 MAPRE1Q15691 268 aaKnown RBP12.27□□□□□ -0.45
HLA-B-254ENST00000497377 SLC39A12Q504Y0 691 aa12.27□□□□□ -0.45
HLA-B-254ENST00000497377 ZNF667Q5HYK9 610 aa12.27□□□□□ -0.45
HLA-B-254ENST00000497377 INTS6LQ5JSJ4 861 aaKnown RBP12.27□□□□□ -0.45
HLA-B-254ENST00000497377 SCARA3Q6AZY7 606 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms