RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 ACAD9Q9H845 621 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 EPB41L4AQ9HCS5 686 aaPredicted RBP2.13□□□□□ -2.07
UBR4-217ENST00000497018 INCENPQ9NQS7 918 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 RBM12Q9NTZ6 932 aaKnown RBP2.13□□□□□ -2.07
UBR4-217ENST00000497018 PIH1D1Q9NWS0 290 aaKnown RBP2.13□□□□□ -2.07
UBR4-217ENST00000497018 ERVK13-1Q9NX77 482 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 ZDHHC7Q9NXF8 308 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 TMOD4Q9NZQ9 345 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 CALCOCO1Q9P1Z2 691 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 MTRRQ9UBK8 725 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 FEZ2Q9UHY8 353 aaPredicted RBP2.13□□□□□ -2.07
UBR4-217ENST00000497018 ZHX1Q9UKY1 873 aaPredicted RBP2.13□□□□□ -2.07
UBR4-217ENST00000497018 KCNH3Q9ULD8 1083 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 PCDHGB4Q9UN71 923 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 MTO1Q9Y2Z2 717 aaKnown RBP2.13□□□□□ -2.07
UBR4-217ENST00000497018 DTNAQ9Y4J8 743 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 PIAS3Q9Y6X2 628 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.13□□□□□ -2.07
UBR4-217ENST00000497018 FLT1P17948 1338 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 MYPNQ86TC9 1320 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 TMEM131LA2VDJ0 1609 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 ASXL1Q8IXJ9 1541 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 EHBP1L1Q8N3D4 1523 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 MYO5CQ9NQX4 1742 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 PLCH2O75038 1416 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 FMN1Q68DA7 1419 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 A0A0A6YYJ9 748 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 A0A0A6YYK5 440 aaPredicted RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 FAM90A18PA6NE21 464 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 FAM90A16PA6NEW6 464 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 PRAMEF25A6NGN4 478 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 HMX3A6NHT5 357 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 FAM90A9PA6NNJ1 464 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 FAM90A5PA8MXJ8 464 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 SHISA8B8ZZ34 492 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 H3BM21 787 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 GTPBP1O00178 669 aaKnown RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 RTCAO00442 366 aaKnown RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 SH2B2O14492 632 aaPredicted RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 ADAM20O43506 726 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 OPHN1O60890 802 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 HMMRO75330 724 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 USP2O75604 605 aaPredicted RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 DGKIO75912 1065 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 ENDOD1O94919 500 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 FSBPO95073 299 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 CSPG5O95196 566 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 TGDSO95455 350 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 MATN4O95460 622 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 MT-ND3P03897 115 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 ANXA1P04083 346 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 AMY1AP04745 511 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 SYPP08247 313 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 FAM90A15PP0C7V4 464 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 FAM90A14PP0C7W9 464 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 FTH1P19P0C7X4 201 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 CSH1P0DML2 217 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 CSH2P0DML3 217 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 TXNP10599 105 aaKnown RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 P4HA1P13674 534 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 GSPT1P15170 499 aaKnown RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 ATF7P17544 494 aaPredicted RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 ENDOUP21128 410 aaKnown RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 FUT4P22083 530 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 FGFR4P22455 802 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 LTKP29376 864 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 PREPP48147 710 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 KCNC1P48547 511 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 CARSP49589 748 aaKnown RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 GPR15P49685 360 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 RGS3P49796 1198 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 AFF3P51826 1226 aaKnown RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 ZNF131P52739 623 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 ZNF132P52740 706 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 POLE2P56282 527 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 SOX10P56693 466 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 SESN2P58004 480 aaPredicted RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 AP2B1P63010 937 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 ATP8B2P98198 1209 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 MC1RQ01726 317 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 SLC6A3Q01959 620 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.12□□□□□ -2.07
UBR4-217ENST00000497018 ADCY2Q08462 1091 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 MAP3K12Q12852 859 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 EPS8Q12929 822 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 SLC12A1Q13621 1099 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 WTAPQ15007 396 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 TBCEQ15813 527 aaPredicted RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 CHRNA2Q15822 529 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 ASIC2Q16515 512 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 MAPKAPK3Q16644 382 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 KYNUQ16719 465 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 TRIM71Q2Q1W2 868 aaKnown RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 MST1LQ2TV78 715 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 MMEL1Q495T6 779 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 TRIM60Q495X7 471 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 TTC31Q49AM3 519 aaPredicted RBP2.12□□□□□ -2.07
UBR4-217ENST00000497018 PARP10Q53GL7 1025 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 CCDC157Q569K6 752 aa2.12□□□□□ -2.07
UBR4-217ENST00000497018 TRAPPC3LQ5T215 181 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms