RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 GPR15P49685 360 aa21■□□□□ 0.95
COL20A1-208ENST00000496810 MRE11P49959 708 aa21■□□□□ 0.95
COL20A1-208ENST00000496810 EPHB3P54753 998 aa21■□□□□ 0.95
COL20A1-208ENST00000496810 PLD1Q13393 1074 aa21■□□□□ 0.95
COL20A1-208ENST00000496810 MGAT5BQ3V5L5 792 aa21■□□□□ 0.95
COL20A1-208ENST00000496810 KMT5BQ4FZB7 885 aa21■□□□□ 0.95
COL20A1-208ENST00000496810 GAREM2Q75VX8 874 aa21■□□□□ 0.95
COL20A1-208ENST00000496810 CCDC105Q8IYK2 499 aa21■□□□□ 0.95
COL20A1-208ENST00000496810 PRRX2Q99811 253 aa21■□□□□ 0.95
COL20A1-208ENST00000496810 MKNK1Q9BUB5 465 aa21■□□□□ 0.95
COL20A1-208ENST00000496810 FRYLO94915 3013 aa20.99■□□□□ 0.95
COL20A1-208ENST00000496810 ZNF638Q14966 1978 aaKnown RBP20.99■□□□□ 0.95
COL20A1-208ENST00000496810 STK25O00506 426 aa20.99■□□□□ 0.95
COL20A1-208ENST00000496810 ZNF197O14709 1029 aa20.99■□□□□ 0.95
COL20A1-208ENST00000496810 MICAL2O94851 1124 aa20.99■□□□□ 0.95
COL20A1-208ENST00000496810 DCNP07585 359 aaKnown RBP20.99■□□□□ 0.95
COL20A1-208ENST00000496810 DLATP10515 647 aaKnown RBP20.99■□□□□ 0.95
COL20A1-208ENST00000496810 ALDH1A3P47895 512 aa20.99■□□□□ 0.95
COL20A1-208ENST00000496810 CASP4P49662 377 aa20.99■□□□□ 0.95
COL20A1-208ENST00000496810 CYP24A1Q07973 514 aa20.99■□□□□ 0.95
COL20A1-208ENST00000496810 VITQ6UXI7 678 aa20.99■□□□□ 0.95
COL20A1-208ENST00000496810 DNAJB7Q7Z6W7 309 aaPredicted RBP20.99■□□□□ 0.95
COL20A1-208ENST00000496810 GPIHBP1Q8IV16 184 aa20.99■□□□□ 0.95
COL20A1-208ENST00000496810 WDR49Q8IV35 697 aa20.99■□□□□ 0.95
COL20A1-208ENST00000496810 THEM5Q8N1Q8 247 aa20.99■□□□□ 0.95
COL20A1-208ENST00000496810 ZSCAN18Q8TBC5 510 aaPredicted RBP20.99■□□□□ 0.95
COL20A1-208ENST00000496810 PLEKHO2Q8TD55 490 aa20.99■□□□□ 0.95
COL20A1-208ENST00000496810 SMARCD2Q92925 531 aa20.99■□□□□ 0.95
COL20A1-208ENST00000496810 PSMG2Q969U7 264 aa20.99■□□□□ 0.95
COL20A1-208ENST00000496810 ELSPBP1Q96BH3 223 aa20.99■□□□□ 0.95
COL20A1-208ENST00000496810 CCDC127Q96BQ5 260 aa20.99■□□□□ 0.95
COL20A1-208ENST00000496810 ANKRD36BP1Q96IX9 119 aa20.99■□□□□ 0.95
COL20A1-208ENST00000496810 PKMYT1Q99640 499 aa20.99■□□□□ 0.95
COL20A1-208ENST00000496810 GDAP2Q9NXN4 497 aa20.99■□□□□ 0.95
COL20A1-208ENST00000496810 DDX43Q9NXZ2 648 aaKnown RBP20.99■□□□□ 0.95
COL20A1-208ENST00000496810 FAM237AA0A1B0GTK4 181 aa20.98■□□□□ 0.95
COL20A1-208ENST00000496810 GLULP15104 373 aa20.98■□□□□ 0.95
COL20A1-208ENST00000496810 CD72P21854 359 aa20.98■□□□□ 0.95
COL20A1-208ENST00000496810 RBP5P82980 135 aa20.98■□□□□ 0.95
COL20A1-208ENST00000496810 MLF2Q15773 248 aaPredicted RBP20.98■□□□□ 0.95
COL20A1-208ENST00000496810 KNOP1Q1ED39 458 aaKnown RBP20.98■□□□□ 0.95
COL20A1-208ENST00000496810 SOWAHAQ2M3V2 549 aa20.98■□□□□ 0.95
COL20A1-208ENST00000496810 SDHAF4Q5VUM1 108 aa20.98■□□□□ 0.95
COL20A1-208ENST00000496810 HS2ST1Q7LGA3 356 aa20.98■□□□□ 0.95
COL20A1-208ENST00000496810 ADGRF2Q8IZF7 708 aa20.98■□□□□ 0.95
COL20A1-208ENST00000496810 FSIP1Q8NA03 581 aa20.98■□□□□ 0.95
COL20A1-208ENST00000496810 XXYLT1Q8NBI6 393 aa20.98■□□□□ 0.95
COL20A1-208ENST00000496810 LEMD2Q8NC56 503 aa20.98■□□□□ 0.95
COL20A1-208ENST00000496810 GIPC2Q8TF65 315 aa20.98■□□□□ 0.95
COL20A1-208ENST00000496810 KBTBD7Q8WVZ9 684 aa20.98■□□□□ 0.95
COL20A1-208ENST00000496810 HPDLQ96IR7 371 aa20.98■□□□□ 0.95
COL20A1-208ENST00000496810 CGRRF1Q99675 332 aa20.98■□□□□ 0.95
COL20A1-208ENST00000496810 SLITRK6Q9H5Y7 841 aa20.98■□□□□ 0.95
COL20A1-208ENST00000496810 IL21Q9HBE4 155 aa20.98■□□□□ 0.95
COL20A1-208ENST00000496810 EXOC1Q9NV70 894 aa20.98■□□□□ 0.95
COL20A1-208ENST00000496810 NME7Q9Y5B8 376 aa20.98■□□□□ 0.95
COL20A1-208ENST00000496810 ANAPC1Q9H1A4 1944 aa20.98■□□□□ 0.95
COL20A1-208ENST00000496810 SHISA7A6NL88 538 aa20.97■□□□□ 0.95
COL20A1-208ENST00000496810 HUS1O60921 280 aa20.97■□□□□ 0.95
COL20A1-208ENST00000496810 TNNC2P02585 160 aa20.97■□□□□ 0.95
COL20A1-208ENST00000496810 HAPLN1P10915 354 aaPredicted RBP20.97■□□□□ 0.95
COL20A1-208ENST00000496810 RFX1P22670 979 aa20.97■□□□□ 0.95
COL20A1-208ENST00000496810 GABRR2P28476 465 aa20.97■□□□□ 0.95
COL20A1-208ENST00000496810 SYKP43405 635 aa20.97■□□□□ 0.95
COL20A1-208ENST00000496810 CYP4F8P98187 520 aa20.97■□□□□ 0.95
COL20A1-208ENST00000496810 PSMD6Q15008 389 aa20.97■□□□□ 0.95
COL20A1-208ENST00000496810 INTS6LQ5JSJ4 861 aaKnown RBP20.97■□□□□ 0.95
COL20A1-208ENST00000496810 TRAPPC11Q7Z392 1133 aa20.97■□□□□ 0.95
COL20A1-208ENST00000496810 C12orf56Q8IXR9 622 aa20.97■□□□□ 0.95
COL20A1-208ENST00000496810 DTWD2Q8NBA8 298 aa20.97■□□□□ 0.95
COL20A1-208ENST00000496810 PJA1Q8NG27 643 aa20.97■□□□□ 0.95
COL20A1-208ENST00000496810 ZNF516Q92618 1163 aa20.97■□□□□ 0.95
COL20A1-208ENST00000496810 PI4K2AQ9BTU6 479 aa20.97■□□□□ 0.95
COL20A1-208ENST00000496810 ZFP14Q9HCL3 533 aa20.97■□□□□ 0.95
COL20A1-208ENST00000496810 DLGAP2Q9P1A6 1054 aa20.97■□□□□ 0.95
COL20A1-208ENST00000496810 HSFX1Q9UBD0 423 aa20.97■□□□□ 0.95
COL20A1-208ENST00000496810 MTF2Q9Y483 593 aaPredicted RBP20.97■□□□□ 0.95
COL20A1-208ENST00000496810 NUBP1P53384 320 aa20.96■□□□□ 0.95
COL20A1-208ENST00000496810 STARD6P59095 220 aa20.96■□□□□ 0.95
COL20A1-208ENST00000496810 TSPY1Q01534 308 aa20.96■□□□□ 0.95
COL20A1-208ENST00000496810 DUOXA2Q1HG44 320 aa20.96■□□□□ 0.95
COL20A1-208ENST00000496810 SLC44A4Q53GD3 710 aa20.96■□□□□ 0.95
COL20A1-208ENST00000496810 PHLDB3Q6NSJ2 640 aa20.96■□□□□ 0.95
COL20A1-208ENST00000496810 LIMS2Q7Z4I7 341 aa20.96■□□□□ 0.95
COL20A1-208ENST00000496810 TOP6BLQ8N6T0 577 aa20.96■□□□□ 0.95
COL20A1-208ENST00000496810 FAM200AQ8TCP9 573 aa20.96■□□□□ 0.95
COL20A1-208ENST00000496810 SPPL2BQ8TCT7 592 aa20.96■□□□□ 0.95
COL20A1-208ENST00000496810 ATOH1Q92858 354 aaPredicted RBP20.96■□□□□ 0.95
COL20A1-208ENST00000496810 ELMO3Q96BJ8 720 aa20.96■□□□□ 0.95
COL20A1-208ENST00000496810 DDX23Q9BUQ8 820 aaKnown RBP20.96■□□□□ 0.95
COL20A1-208ENST00000496810 KIAA1586Q9HCI6 787 aa20.96■□□□□ 0.95
COL20A1-208ENST00000496810 HEBP1Q9NRV9 189 aa20.96■□□□□ 0.95
COL20A1-208ENST00000496810 RIF1Q5UIP0 2472 aaKnown RBP20.96■□□□□ 0.95
COL20A1-208ENST00000496810 GABRDO14764 452 aa20.95■□□□□ 0.94
COL20A1-208ENST00000496810 ATP2C2O75185 946 aa20.95■□□□□ 0.94
COL20A1-208ENST00000496810 CST3P01034 146 aaPredicted RBP20.95■□□□□ 0.94
COL20A1-208ENST00000496810 LMO2P25791 158 aa20.95■□□□□ 0.94
COL20A1-208ENST00000496810 PSMC1P62191 440 aaKnown RBP20.95■□□□□ 0.94
COL20A1-208ENST00000496810 SURF1Q15526 300 aa20.95■□□□□ 0.94
COL20A1-208ENST00000496810 TPRG1Q6ZUI0 275 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms