RNA–Protein interactions for RNA: ENST00000496569.1

HDLBP-246, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-246ENST00000496569 FAM78AQ5JUQ0 283 aa13.13□□□□□ -0.31
HDLBP-246ENST00000496569 RTL10Q7L3V2 364 aa13.13□□□□□ -0.31
HDLBP-246ENST00000496569 HS2ST1Q7LGA3 356 aa13.13□□□□□ -0.31
HDLBP-246ENST00000496569 TRAPPC11Q7Z392 1133 aa13.13□□□□□ -0.31
HDLBP-246ENST00000496569 WDR49Q8IV35 697 aa13.13□□□□□ -0.31
HDLBP-246ENST00000496569 SMYD4Q8IYR2 804 aaPredicted RBP13.13□□□□□ -0.31
HDLBP-246ENST00000496569 ADGRF2Q8IZF7 708 aa13.13□□□□□ -0.31
HDLBP-246ENST00000496569 THEM5Q8N1Q8 247 aa13.13□□□□□ -0.31
HDLBP-246ENST00000496569 LRRC52Q8N7C0 313 aa13.13□□□□□ -0.31
HDLBP-246ENST00000496569 ERCC4Q92889 916 aaPredicted RBP13.13□□□□□ -0.31
HDLBP-246ENST00000496569 RSPRY1Q96DX4 576 aa13.13□□□□□ -0.31
HDLBP-246ENST00000496569 PI4K2AQ9BTU6 479 aa13.13□□□□□ -0.31
HDLBP-246ENST00000496569 FOXQ1Q9C009 403 aa13.13□□□□□ -0.31
HDLBP-246ENST00000496569 SCAND2PQ9GZW5 306 aaPredicted RBP13.13□□□□□ -0.31
HDLBP-246ENST00000496569 KCTD10Q9H3F6 313 aa13.13□□□□□ -0.31
HDLBP-246ENST00000496569 AVENQ9NQS1 362 aaPredicted RBP13.13□□□□□ -0.31
HDLBP-246ENST00000496569 DDX43Q9NXZ2 648 aaKnown RBP13.13□□□□□ -0.31
HDLBP-246ENST00000496569 DSEQ9UL01 958 aa13.13□□□□□ -0.31
HDLBP-246ENST00000496569 NME7Q9Y5B8 376 aa13.13□□□□□ -0.31
HDLBP-246ENST00000496569 HELZP42694 1942 aaKnown RBP13.13□□□□□ -0.31
HDLBP-246ENST00000496569 A0A1W2PQ27 194 aa13.12□□□□□ -0.31
HDLBP-246ENST00000496569 A0A1W2PQ64 194 aa13.12□□□□□ -0.31
HDLBP-246ENST00000496569 A0A1W2PQD8 194 aa13.12□□□□□ -0.31
HDLBP-246ENST00000496569 H0Y858 1186 aa13.12□□□□□ -0.31
HDLBP-246ENST00000496569 STK25O00506 426 aa13.12□□□□□ -0.31
HDLBP-246ENST00000496569 EXOC3O60645 756 aa13.12□□□□□ -0.31
HDLBP-246ENST00000496569 HUS1O60921 280 aa13.12□□□□□ -0.31
HDLBP-246ENST00000496569 ZNF202O95125 648 aa13.12□□□□□ -0.31
HDLBP-246ENST00000496569 CD72P21854 359 aa13.12□□□□□ -0.31
HDLBP-246ENST00000496569 GABRR2P28476 465 aa13.12□□□□□ -0.31
HDLBP-246ENST00000496569 PNPLA4P41247 253 aa13.12□□□□□ -0.31
HDLBP-246ENST00000496569 ALDH1A3P47895 512 aa13.12□□□□□ -0.31
HDLBP-246ENST00000496569 EPHB3P54753 998 aa13.12□□□□□ -0.31
HDLBP-246ENST00000496569 EPHA5P54756 1037 aa13.12□□□□□ -0.31
HDLBP-246ENST00000496569 DLG4P78352 724 aa13.12□□□□□ -0.31
HDLBP-246ENST00000496569 SNW1Q13573 536 aaKnown RBP13.12□□□□□ -0.31
HDLBP-246ENST00000496569 CYP4A22Q5TCH4 519 aa13.12□□□□□ -0.31
HDLBP-246ENST00000496569 ASTLQ6HA08 431 aaPredicted RBP13.12□□□□□ -0.31
HDLBP-246ENST00000496569 GAREM2Q75VX8 874 aa13.12□□□□□ -0.31
HDLBP-246ENST00000496569 MTSS1LQ765P7 747 aa13.12□□□□□ -0.31
HDLBP-246ENST00000496569 FAM200AQ8TCP9 573 aa13.12□□□□□ -0.31
HDLBP-246ENST00000496569 KBTBD7Q8WVZ9 684 aa13.12□□□□□ -0.31
HDLBP-246ENST00000496569 NXPE3Q969Y0 559 aa13.12□□□□□ -0.31
HDLBP-246ENST00000496569 HPDLQ96IR7 371 aa13.12□□□□□ -0.31
HDLBP-246ENST00000496569 ASB16Q96NS5 453 aa13.12□□□□□ -0.31
HDLBP-246ENST00000496569 FNBP1Q96RU3 617 aa13.12□□□□□ -0.31
HDLBP-246ENST00000496569 SLITRK6Q9H5Y7 841 aa13.12□□□□□ -0.31
HDLBP-246ENST00000496569 TBC1D17Q9HA65 648 aa13.12□□□□□ -0.31
HDLBP-246ENST00000496569 ARHGEF3Q9NR81 526 aa13.12□□□□□ -0.31
HDLBP-246ENST00000496569 GTF3C4Q9UKN8 822 aa13.12□□□□□ -0.31
HDLBP-246ENST00000496569 ATP6V1DQ9Y5K8 247 aa13.12□□□□□ -0.31
HDLBP-246ENST00000496569 ZFP37Q9Y6Q3 630 aaPredicted RBP13.12□□□□□ -0.31
HDLBP-246ENST00000496569 MYO16Q9Y6X6 1858 aa13.11□□□□□ -0.31
HDLBP-246ENST00000496569 MYBPHLA2RUH7 354 aa13.11□□□□□ -0.31
HDLBP-246ENST00000496569 LRRIQ3A6PVS8 624 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-246ENST00000496569 DCNP07585 359 aaKnown RBP13.11□□□□□ -0.31
HDLBP-246ENST00000496569 HAPLN1P10915 354 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-246ENST00000496569 CYP2F1P24903 491 aa13.11□□□□□ -0.31
HDLBP-246ENST00000496569 LMO2P25791 158 aa13.11□□□□□ -0.31
HDLBP-246ENST00000496569 TSPY1Q01534 308 aa13.11□□□□□ -0.31
HDLBP-246ENST00000496569 PNOCQ13519 176 aa13.11□□□□□ -0.31
HDLBP-246ENST00000496569 DUOXA2Q1HG44 320 aa13.11□□□□□ -0.31
HDLBP-246ENST00000496569 INTS6LQ5JSJ4 861 aaKnown RBP13.11□□□□□ -0.31
HDLBP-246ENST00000496569 VITQ6UXI7 678 aa13.11□□□□□ -0.31
HDLBP-246ENST00000496569 SCARA5Q6ZMJ2 495 aa13.11□□□□□ -0.31
HDLBP-246ENST00000496569 DNAJB7Q7Z6W7 309 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-246ENST00000496569 C12orf56Q8IXR9 622 aa13.11□□□□□ -0.31
HDLBP-246ENST00000496569 ZSCAN18Q8TBC5 510 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-246ENST00000496569 PSMG2Q969U7 264 aa13.11□□□□□ -0.31
HDLBP-246ENST00000496569 PKMYT1Q99640 499 aa13.11□□□□□ -0.31
HDLBP-246ENST00000496569 MRPL45Q9BRJ2 306 aaKnown RBP13.11□□□□□ -0.31
HDLBP-246ENST00000496569 MKNK1Q9BUB5 465 aa13.11□□□□□ -0.31
HDLBP-246ENST00000496569 OXCT2Q9BYC2 517 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-246ENST00000496569 KIAA1586Q9HCI6 787 aa13.11□□□□□ -0.31
HDLBP-246ENST00000496569 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.11□□□□□ -0.314e-9■■■■■ 125.9
HDLBP-246ENST00000496569 GDAP2Q9NXN4 497 aa13.11□□□□□ -0.31
HDLBP-246ENST00000496569 WNT16Q9UBV4 365 aa13.11□□□□□ -0.31
HDLBP-246ENST00000496569 USP25Q9UHP3 1055 aa13.11□□□□□ -0.31
HDLBP-246ENST00000496569 MYO15AQ9UKN7 3530 aa13.1□□□□□ -0.31
HDLBP-246ENST00000496569 ZNF197O14709 1029 aa13.1□□□□□ -0.31
HDLBP-246ENST00000496569 PRPF40AO75400 957 aaKnown RBP13.1□□□□□ -0.31
HDLBP-246ENST00000496569 NR3C1P04150 777 aa13.1□□□□□ -0.31
HDLBP-246ENST00000496569 PDGFRBP09619 1106 aa13.1□□□□□ -0.31
HDLBP-246ENST00000496569 AOC1P19801 751 aa13.1□□□□□ -0.31
HDLBP-246ENST00000496569 RFX1P22670 979 aa13.1□□□□□ -0.31
HDLBP-246ENST00000496569 PAX3P23760 479 aa13.1□□□□□ -0.31
HDLBP-246ENST00000496569 RAP1GAPP47736 663 aa13.1□□□□□ -0.31
HDLBP-246ENST00000496569 MYL6P60660 151 aa13.1□□□□□ -0.31
HDLBP-246ENST00000496569 SURF1Q15526 300 aa13.1□□□□□ -0.31
HDLBP-246ENST00000496569 DDR2Q16832 855 aa13.1□□□□□ -0.31
HDLBP-246ENST00000496569 TDRD10Q5VZ19 366 aaKnown RBP13.1□□□□□ -0.31
HDLBP-246ENST00000496569 CEP135Q66GS9 1140 aa13.1□□□□□ -0.31
HDLBP-246ENST00000496569 TOP6BLQ8N6T0 577 aa13.1□□□□□ -0.31
HDLBP-246ENST00000496569 SPPL2BQ8TCT7 592 aa13.1□□□□□ -0.31
HDLBP-246ENST00000496569 EEF2KMTQ96G04 330 aa13.1□□□□□ -0.31
HDLBP-246ENST00000496569 MMS19Q96T76 1030 aa13.1□□□□□ -0.31
HDLBP-246ENST00000496569 SYT15Q9BQS2 421 aa13.1□□□□□ -0.31
HDLBP-246ENST00000496569 SMG9Q9H0W8 520 aaKnown RBP13.1□□□□□ -0.31
HDLBP-246ENST00000496569 ATXN3LQ9H3M9 355 aa13.1□□□□□ -0.31
HDLBP-246ENST00000496569 SMYD3Q9H7B4 428 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms