RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 TNIP3Q96KP6 325 aa23.22■■□□□ 1.31
C9orf3-222ENST00000496567 SPAG5Q96R06 1193 aa23.22■■□□□ 1.31
C9orf3-222ENST00000496567 NT5C1AQ9BXI3 368 aa23.22■■□□□ 1.31
C9orf3-222ENST00000496567 NLRC4Q9NPP4 1024 aa23.22■■□□□ 1.31
C9orf3-222ENST00000496567 CDH9Q9ULB4 789 aa23.22■■□□□ 1.31
C9orf3-222ENST00000496567 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.21■■□□□ 1.31
C9orf3-222ENST00000496567 TBC1D4O60343 1298 aa23.21■■□□□ 1.31
C9orf3-222ENST00000496567 ADCY5O95622 1261 aa23.21■■□□□ 1.31
C9orf3-222ENST00000496567 PDGFRBP09619 1106 aa23.21■■□□□ 1.31
C9orf3-222ENST00000496567 LMO2P25791 158 aa23.21■■□□□ 1.31
C9orf3-222ENST00000496567 TSPY1Q01534 308 aa23.21■■□□□ 1.31
C9orf3-222ENST00000496567 TRIM14Q14142 442 aa23.21■■□□□ 1.31
C9orf3-222ENST00000496567 DRAP1Q14919 205 aaPredicted RBP23.21■■□□□ 1.31
C9orf3-222ENST00000496567 RTP3Q9BQQ7 232 aa23.21■■□□□ 1.31
C9orf3-222ENST00000496567 EMILIN2Q9BXX0 1053 aa23.21■■□□□ 1.31
C9orf3-222ENST00000496567 RXFP1Q9HBX9 757 aa23.21■■□□□ 1.31
C9orf3-222ENST00000496567 AJAP1Q9UKB5 411 aaPredicted RBP23.21■■□□□ 1.31
C9orf3-222ENST00000496567 CHD7Q9P2D1 2997 aa23.21■■□□□ 1.31
C9orf3-222ENST00000496567 RFXAPO00287 272 aa23.2■■□□□ 1.3
C9orf3-222ENST00000496567 TMEM270Q6UE05 265 aa23.2■■□□□ 1.3
C9orf3-222ENST00000496567 MRPL38Q96DV4 380 aaKnown RBP23.2■■□□□ 1.3
C9orf3-222ENST00000496567 SYT15Q9BQS2 421 aa23.2■■□□□ 1.3
C9orf3-222ENST00000496567 CNTN6Q9UQ52 1028 aa23.2■■□□□ 1.3
C9orf3-222ENST00000496567 A0A1W2PQJ5 194 aa23.19■■□□□ 1.3
C9orf3-222ENST00000496567 C2orf71A6NGG8 1288 aa23.19■■□□□ 1.3
C9orf3-222ENST00000496567 CSPG5O95196 566 aa23.19■■□□□ 1.3
C9orf3-222ENST00000496567 KRT5P13647 590 aa23.19■■□□□ 1.3
C9orf3-222ENST00000496567 ACAT1P24752 427 aaKnown RBP23.19■■□□□ 1.3
C9orf3-222ENST00000496567 SLC8B1Q6J4K2 584 aa23.19■■□□□ 1.3
C9orf3-222ENST00000496567 DCP1BQ8IZD4 617 aaKnown RBP23.19■■□□□ 1.3
C9orf3-222ENST00000496567 WHAMMQ8TF30 809 aa23.19■■□□□ 1.3
C9orf3-222ENST00000496567 TMEM176AQ96HP8 235 aa23.19■■□□□ 1.3
C9orf3-222ENST00000496567 CLSTN3Q9BQT9 956 aa23.19■■□□□ 1.3
C9orf3-222ENST00000496567 TTYH3Q9C0H2 523 aa23.19■■□□□ 1.3
C9orf3-222ENST00000496567 MYO6Q9UM54 1294 aa23.19■■□□□ 1.3
C9orf3-222ENST00000496567 CDY1Q9Y6F8 540 aa23.19■■□□□ 1.3
C9orf3-222ENST00000496567 COL4A4P53420 1690 aaPredicted RBP23.19■■□□□ 1.3
C9orf3-222ENST00000496567 F8VZ95 297 aa23.18■■□□□ 1.3
C9orf3-222ENST00000496567 FOXN3O00409 490 aaPredicted RBP23.18■■□□□ 1.3
C9orf3-222ENST00000496567 TPM1P09493 284 aa23.18■■□□□ 1.3
C9orf3-222ENST00000496567 IRS1P35568 1242 aa23.18■■□□□ 1.3
C9orf3-222ENST00000496567 USP8P40818 1118 aa23.18■■□□□ 1.3
C9orf3-222ENST00000496567 NDUFV1P49821 464 aa23.18■■□□□ 1.3
C9orf3-222ENST00000496567 JAM2P57087 298 aa23.18■■□□□ 1.3
C9orf3-222ENST00000496567 MAPRE1Q15691 268 aaKnown RBP23.18■■□□□ 1.3
C9orf3-222ENST00000496567 ZNF394Q53GI3 561 aa23.18■■□□□ 1.3
C9orf3-222ENST00000496567 INTS6LQ5JSJ4 861 aaKnown RBP23.18■■□□□ 1.3
C9orf3-222ENST00000496567 TMC6Q7Z403 805 aa23.18■■□□□ 1.3
C9orf3-222ENST00000496567 PPFIBP1Q86W92 1011 aa23.18■■□□□ 1.3
C9orf3-222ENST00000496567 FMNL3Q8IVF7 1028 aa23.18■■□□□ 1.3
C9orf3-222ENST00000496567 CRYBG2Q8N1P7 616 aa23.18■■□□□ 1.3
C9orf3-222ENST00000496567 RBBP8NLQ8NC74 664 aaPredicted RBP23.18■■□□□ 1.3
C9orf3-222ENST00000496567 ZNF397Q8NF99 534 aaPredicted RBP23.18■■□□□ 1.3
C9orf3-222ENST00000496567 OR10T2Q8NGX3 314 aa23.18■■□□□ 1.3
C9orf3-222ENST00000496567 ZCWPW1Q9H0M4 648 aa23.18■■□□□ 1.3
C9orf3-222ENST00000496567 PRDM12Q9H4Q4 367 aa23.18■■□□□ 1.3
C9orf3-222ENST00000496567 LMCD1Q9NZU5 365 aa23.18■■□□□ 1.3
C9orf3-222ENST00000496567 HMGXB4Q9UGU5 601 aa23.18■■□□□ 1.3
C9orf3-222ENST00000496567 NME7Q9Y5B8 376 aa23.18■■□□□ 1.3
C9orf3-222ENST00000496567 HIDE1A8MVS5 230 aa23.18■■□□□ 1.3
C9orf3-222ENST00000496567 HCRTO43612 131 aa23.18■■□□□ 1.3
C9orf3-222ENST00000496567 ADH1AP07327 375 aa23.18■■□□□ 1.3
C9orf3-222ENST00000496567 PAEPP09466 180 aa23.18■■□□□ 1.3
C9orf3-222ENST00000496567 PTPN1P18031 435 aaKnown RBP23.18■■□□□ 1.3
C9orf3-222ENST00000496567 RPL17P18621 184 aaKnown RBP23.18■■□□□ 1.3
C9orf3-222ENST00000496567 CDC25BP30305 580 aa23.18■■□□□ 1.3
C9orf3-222ENST00000496567 OR1D2P34982 312 aa23.18■■□□□ 1.3
C9orf3-222ENST00000496567 STAT1P42224 750 aa23.18■■□□□ 1.3
C9orf3-222ENST00000496567 RAD23BP54727 409 aa23.18■■□□□ 1.3
C9orf3-222ENST00000496567 GRIN2CQ14957 1233 aa23.18■■□□□ 1.3
C9orf3-222ENST00000496567 B3GALNT2Q8NCR0 500 aa23.18■■□□□ 1.3
C9orf3-222ENST00000496567 TWNKQ96RR1 684 aa23.18■■□□□ 1.3
C9orf3-222ENST00000496567 GPR88Q9GZN0 384 aa23.18■■□□□ 1.3
C9orf3-222ENST00000496567 ELOVL4Q9GZR5 314 aa23.18■■□□□ 1.3
C9orf3-222ENST00000496567 CAPN11Q9UMQ6 739 aa23.18■■□□□ 1.3
C9orf3-222ENST00000496567 TEX28O15482 410 aa23.17■■□□□ 1.3
C9orf3-222ENST00000496567 CNPP09543 421 aaKnown RBP23.17■■□□□ 1.3
C9orf3-222ENST00000496567 CPB1P15086 417 aa23.17■■□□□ 1.3
C9orf3-222ENST00000496567 SMARCB1Q12824 385 aa23.17■■□□□ 1.3
C9orf3-222ENST00000496567 RSPO2Q6UXX9 243 aaPredicted RBP23.17■■□□□ 1.3
C9orf3-222ENST00000496567 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.17■■□□□ 1.3
C9orf3-222ENST00000496567 ACOT1Q86TX2 421 aa23.17■■□□□ 1.3
C9orf3-222ENST00000496567 FAM71AQ8IYT1 594 aa23.17■■□□□ 1.3
C9orf3-222ENST00000496567 SLC4A11Q8NBS3 891 aa23.17■■□□□ 1.3
C9orf3-222ENST00000496567 PPP2R3CQ969Q6 453 aa23.17■■□□□ 1.3
C9orf3-222ENST00000496567 KLHL5Q96PQ7 755 aa23.17■■□□□ 1.3
C9orf3-222ENST00000496567 DPEP3Q9H4B8 488 aa23.17■■□□□ 1.3
C9orf3-222ENST00000496567 KIAA1257Q9ULG3 409 aa23.17■■□□□ 1.3
C9orf3-222ENST00000496567 LUC7L2Q9Y383 392 aaKnown RBP23.17■■□□□ 1.3
C9orf3-222ENST00000496567 GYPCP04921 128 aa23.16■■□□□ 1.3
C9orf3-222ENST00000496567 SOX5P35711 763 aa23.16■■□□□ 1.3
C9orf3-222ENST00000496567 ZNF132P52740 706 aa23.16■■□□□ 1.3
C9orf3-222ENST00000496567 ARPP19P56211 112 aa23.16■■□□□ 1.3
C9orf3-222ENST00000496567 PSMC1P62191 440 aaKnown RBP23.16■■□□□ 1.3
C9orf3-222ENST00000496567 GPR17Q13304 367 aa23.16■■□□□ 1.3
C9orf3-222ENST00000496567 DRC7Q8IY82 874 aa23.16■■□□□ 1.3
C9orf3-222ENST00000496567 CPLX3Q8WVH0 158 aa23.16■■□□□ 1.3
C9orf3-222ENST00000496567 BAP1Q92560 729 aa23.16■■□□□ 1.3
C9orf3-222ENST00000496567 HEXIM2Q96MH2 286 aaKnown RBP23.16■■□□□ 1.3
C9orf3-222ENST00000496567 TMEM209Q96SK2 561 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms