RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 M0QYV0 167 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 PBX2P40425 430 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 BCAT1P54687 386 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 HTRA4P83105 476 aaPredicted RBP9.16□□□□□ -0.94
U2AF1-212ENST00000496462 CCDC173Q0VFZ6 552 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 C16orf59Q7L2K0 433 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 PALB2Q86YC2 1186 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 TMTC1Q8IUR5 882 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 C1orf127Q8N9H9 656 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 TTC16Q8NEE8 873 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 FUBP3Q96I24 572 aaKnown RBP eCLIP9.16□□□□□ -0.94
U2AF1-212ENST00000496462 FIZ1Q96SL8 496 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 DMAP1Q9NPF5 467 aaPredicted RBP9.16□□□□□ -0.94
U2AF1-212ENST00000496462 AP1G2O75843 785 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 FBXO21O94952 628 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 CALB1P05937 261 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 WEE2P0C1S8 567 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 MTA1Q13330 715 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 DRAP1Q14919 205 aaPredicted RBP9.16□□□□□ -0.94
U2AF1-212ENST00000496462 SLC39A12Q504Y0 691 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 BTBD8Q5XKL5 378 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 SLC39A4Q6P5W5 647 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 CYP26C1Q6V0L0 522 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 ERICH1Q86X53 443 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 NECTIN4Q96NY8 510 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 ERGIC2Q96RQ1 377 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 ASAH2Q9NR71 780 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 CISHQ9NSE2 258 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 GDAP2Q9NXN4 497 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 DONSONQ9NYP3 566 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 WDR35Q9P2L0 1181 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 STAP1Q9ULZ2 295 aa9.16□□□□□ -0.94
U2AF1-212ENST00000496462 MAGED2Q9UNF1 606 aaPredicted RBP9.16□□□□□ -0.94
U2AF1-212ENST00000496462 ALPK3Q96L96 1907 aa9.15□□□□□ -0.94
U2AF1-212ENST00000496462 ZSCAN12O43309 604 aa9.15□□□□□ -0.94
U2AF1-212ENST00000496462 PTPN1P18031 435 aaKnown RBP9.15□□□□□ -0.94
U2AF1-212ENST00000496462 WARSP23381 471 aaKnown RBP9.15□□□□□ -0.94
U2AF1-212ENST00000496462 CDC25CP30307 473 aa9.15□□□□□ -0.94
U2AF1-212ENST00000496462 GUCY2FP51841 1108 aa9.15□□□□□ -0.94
U2AF1-212ENST00000496462 PDZD4Q76G19 769 aaPredicted RBP9.15□□□□□ -0.94
U2AF1-212ENST00000496462 TMCO2Q7Z6W1 182 aaPredicted RBP9.15□□□□□ -0.94
U2AF1-212ENST00000496462 KREMEN2Q8NCW0 462 aa9.15□□□□□ -0.94
U2AF1-212ENST00000496462 OR5B17Q8NGF7 314 aa9.15□□□□□ -0.94
U2AF1-212ENST00000496462 HDAC7Q8WUI4 952 aa9.15□□□□□ -0.94
U2AF1-212ENST00000496462 TMEM174Q8WUU8 243 aa9.15□□□□□ -0.94
U2AF1-212ENST00000496462 MRPL38Q96DV4 380 aaKnown RBP9.15□□□□□ -0.94
U2AF1-212ENST00000496462 PBX4Q9BYU1 374 aa9.15□□□□□ -0.94
U2AF1-212ENST00000496462 GPR88Q9GZN0 384 aa9.15□□□□□ -0.94
U2AF1-212ENST00000496462 MRPL47Q9HD33 250 aaKnown RBP9.15□□□□□ -0.94
U2AF1-212ENST00000496462 CDY1Q9Y6F8 540 aa9.15□□□□□ -0.94
U2AF1-212ENST00000496462 H3BNC9 293 aa9.15□□□□□ -0.94
U2AF1-212ENST00000496462 C4BPAP04003 597 aaKnown RBP9.15□□□□□ -0.94
U2AF1-212ENST00000496462 GATMP50440 423 aa9.15□□□□□ -0.94
U2AF1-212ENST00000496462 RTN4RL1Q86UN2 441 aaPredicted RBP9.15□□□□□ -0.94
U2AF1-212ENST00000496462 CYFIP2Q96F07 1278 aa9.15□□□□□ -0.94
U2AF1-212ENST00000496462 FGFBP2Q9BYJ0 223 aa9.15□□□□□ -0.94
U2AF1-212ENST00000496462 HAUS2Q9NVX0 235 aa9.15□□□□□ -0.94
U2AF1-212ENST00000496462 STIM2Q9P246 746 aa9.15□□□□□ -0.94
U2AF1-212ENST00000496462 TIMM13Q9Y5L4 95 aaPredicted RBP9.15□□□□□ -0.94
U2AF1-212ENST00000496462 LRRC37A2A6NM11 1700 aa9.15□□□□□ -0.94
U2AF1-212ENST00000496462 GFPT2O94808 682 aa9.15□□□□□ -0.95
U2AF1-212ENST00000496462 HNRNPA1P09651 372 aaKnown RBP eCLIP9.15□□□□□ -0.95
U2AF1-212ENST00000496462 SOX5P35711 763 aa9.15□□□□□ -0.95
U2AF1-212ENST00000496462 UPP1Q16831 310 aa9.15□□□□□ -0.95
U2AF1-212ENST00000496462 ARHGAP29Q52LW3 1261 aa9.15□□□□□ -0.95
U2AF1-212ENST00000496462 MDH1BQ5I0G3 518 aa9.15□□□□□ -0.95
U2AF1-212ENST00000496462 OR6B2Q6IFH4 312 aa9.15□□□□□ -0.95
U2AF1-212ENST00000496462 TRIM65Q6PJ69 517 aa9.15□□□□□ -0.95
U2AF1-212ENST00000496462 ZNF280BQ86YH2 543 aa9.15□□□□□ -0.95
U2AF1-212ENST00000496462 MYLIPQ8WY64 445 aa9.15□□□□□ -0.95
U2AF1-212ENST00000496462 SMG7Q92540 1137 aaKnown RBP9.15□□□□□ -0.95
U2AF1-212ENST00000496462 GOLGA2P5Q9HBQ8 144 aa9.15□□□□□ -0.95
U2AF1-212ENST00000496462 ALG13Q9NP73 1137 aaKnown RBP9.15□□□□□ -0.95
U2AF1-212ENST00000496462 THG1LQ9NWX6 298 aaKnown RBP9.15□□□□□ -0.95
U2AF1-212ENST00000496462 CLDND1Q9NY35 253 aa9.15□□□□□ -0.95
U2AF1-212ENST00000496462 INPPL1O15357 1258 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 NOP2P46087 812 aaKnown RBP9.14□□□□□ -0.95
U2AF1-212ENST00000496462 ZNF75DP51815 510 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 NR1H3Q13133 447 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 ZBTB41Q5SVQ8 909 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 C10orf76Q5T2E6 689 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 CDKAL1Q5VV42 579 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 RBM23Q86U06 439 aaKnown RBP9.14□□□□□ -0.95
U2AF1-212ENST00000496462 ZNF518BQ9C0D4 1074 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 FNIP2Q9P278 1114 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 PLAGL2Q9UPG8 496 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 PIRO00625 290 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 SERPING1P05155 500 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 MYOGP15173 224 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 UCHL3P15374 230 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 GBP2P32456 591 aaPredicted RBP9.14□□□□□ -0.95
U2AF1-212ENST00000496462 PPP3CCP48454 512 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 PSEN1P49768 467 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 NDST1P52848 882 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 PPP3CAQ08209 521 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 DSC1Q08554 894 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 INTS6LQ5JSJ4 861 aaKnown RBP9.14□□□□□ -0.95
U2AF1-212ENST00000496462 KLHDC7AQ5VTJ3 777 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 TRAF7Q6Q0C0 670 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 SARM1Q6SZW1 724 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms