RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 SLC44A3Q8N4M1 653 aa22.14■■□□□ 1.13
COL9A2-211ENST00000496215 PLEKHO2Q8TD55 490 aa22.14■■□□□ 1.13
COL9A2-211ENST00000496215 FGF14Q92915 247 aa22.14■■□□□ 1.13
COL9A2-211ENST00000496215 TIGD1Q96MW7 591 aa22.14■■□□□ 1.13
COL9A2-211ENST00000496215 ACBD6Q9BR61 282 aa22.14■■□□□ 1.13
COL9A2-211ENST00000496215 GDE1Q9NZC3 331 aa22.14■■□□□ 1.13
COL9A2-211ENST00000496215 COL4A3Q01955 1670 aa22.14■■□□□ 1.13
COL9A2-211ENST00000496215 KINO60870 393 aaKnown RBP22.13■■□□□ 1.13
COL9A2-211ENST00000496215 PHACTR2O75167 634 aa22.13■■□□□ 1.13
COL9A2-211ENST00000496215 SOAT2O75908 522 aa22.13■■□□□ 1.13
COL9A2-211ENST00000496215 CLSTN1O94985 981 aa22.13■■□□□ 1.13
COL9A2-211ENST00000496215 MYL4P12829 197 aa22.13■■□□□ 1.13
COL9A2-211ENST00000496215 ACAT1P24752 427 aaKnown RBP22.13■■□□□ 1.13
COL9A2-211ENST00000496215 PCSK1P29120 753 aa22.13■■□□□ 1.13
COL9A2-211ENST00000496215 LHX1P48742 406 aa22.13■■□□□ 1.13
COL9A2-211ENST00000496215 TUFMP49411 452 aaKnown RBP22.13■■□□□ 1.13
COL9A2-211ENST00000496215 EPHA5P54756 1037 aa22.13■■□□□ 1.13
COL9A2-211ENST00000496215 VEPH1Q14D04 833 aa22.13■■□□□ 1.13
COL9A2-211ENST00000496215 NFIL3Q16649 462 aa22.13■■□□□ 1.13
COL9A2-211ENST00000496215 MGAT5BQ3V5L5 792 aa22.13■■□□□ 1.13
COL9A2-211ENST00000496215 INTS6LQ5JSJ4 861 aaKnown RBP22.13■■□□□ 1.13
COL9A2-211ENST00000496215 DPH6Q7L8W6 267 aa22.13■■□□□ 1.13
COL9A2-211ENST00000496215 LRRTM3Q86VH5 581 aa22.13■■□□□ 1.13
COL9A2-211ENST00000496215 SMYD4Q8IYR2 804 aaPredicted RBP22.13■■□□□ 1.13
COL9A2-211ENST00000496215 HS6ST3Q8IZP7 471 aa22.13■■□□□ 1.13
COL9A2-211ENST00000496215 PARD3BQ8TEW8 1205 aa22.13■■□□□ 1.13
COL9A2-211ENST00000496215 TCEAL4Q96EI5 215 aa22.13■■□□□ 1.13
COL9A2-211ENST00000496215 GSDMAQ96QA5 445 aa22.13■■□□□ 1.13
COL9A2-211ENST00000496215 DNAJC25Q9H1X3 360 aa22.13■■□□□ 1.13
COL9A2-211ENST00000496215 ARIH1Q9Y4X5 557 aaPredicted RBP22.13■■□□□ 1.13
COL9A2-211ENST00000496215 ASB3Q9Y575 518 aa22.13■■□□□ 1.13
COL9A2-211ENST00000496215 PCDHB5Q9Y5E4 795 aa22.13■■□□□ 1.13
COL9A2-211ENST00000496215 MICAL2O94851 1124 aa22.12■■□□□ 1.13
COL9A2-211ENST00000496215 SRFP11831 508 aa22.12■■□□□ 1.13
COL9A2-211ENST00000496215 TNNC1P63316 161 aa22.12■■□□□ 1.13
COL9A2-211ENST00000496215 NFE2Q16621 373 aaPredicted RBP22.12■■□□□ 1.13
COL9A2-211ENST00000496215 ITIH5Q86UX2 942 aa22.12■■□□□ 1.13
COL9A2-211ENST00000496215 OSTM1Q86WC4 334 aa22.12■■□□□ 1.13
COL9A2-211ENST00000496215 FAM200AQ8TCP9 573 aa22.12■■□□□ 1.13
COL9A2-211ENST00000496215 ZNF516Q92618 1163 aa22.12■■□□□ 1.13
COL9A2-211ENST00000496215 SMARCE1Q969G3 411 aa22.12■■□□□ 1.13
COL9A2-211ENST00000496215 SYAP1Q96A49 352 aaPredicted RBP22.12■■□□□ 1.13
COL9A2-211ENST00000496215 MCRS1Q96EZ8 462 aa22.12■■□□□ 1.13
COL9A2-211ENST00000496215 MMS19Q96T76 1030 aa22.12■■□□□ 1.13
COL9A2-211ENST00000496215 CHMP5Q9NZZ3 219 aa22.12■■□□□ 1.13
COL9A2-211ENST00000496215 FBXL21Q9UKT6 434 aa22.12■■□□□ 1.13
COL9A2-211ENST00000496215 GABRDO14764 452 aa22.11■■□□□ 1.13
COL9A2-211ENST00000496215 MAPK13O15264 365 aa22.11■■□□□ 1.13
COL9A2-211ENST00000496215 STAU1O95793 577 aaKnown RBP22.11■■□□□ 1.13
COL9A2-211ENST00000496215 CST3P01034 146 aaPredicted RBP22.11■■□□□ 1.13
COL9A2-211ENST00000496215 ATF6P18850 670 aa22.11■■□□□ 1.13
COL9A2-211ENST00000496215 RPL13P26373 211 aaKnown RBP22.11■■□□□ 1.13
COL9A2-211ENST00000496215 ATICP31939 592 aa22.11■■□□□ 1.13
COL9A2-211ENST00000496215 CLDN10P78369 228 aa22.11■■□□□ 1.13
COL9A2-211ENST00000496215 ZCWPW2Q504Y3 356 aa22.11■■□□□ 1.13
COL9A2-211ENST00000496215 TDRD10Q5VZ19 366 aaKnown RBP22.11■■□□□ 1.13
COL9A2-211ENST00000496215 LIMS2Q7Z4I7 341 aa22.11■■□□□ 1.13
COL9A2-211ENST00000496215 TMC8Q8IU68 726 aa22.11■■□□□ 1.13
COL9A2-211ENST00000496215 PRSS33Q8NF86 280 aa22.11■■□□□ 1.13
COL9A2-211ENST00000496215 TMC2Q8TDI7 906 aa22.11■■□□□ 1.13
COL9A2-211ENST00000496215 KBTBD7Q8WVZ9 684 aa22.11■■□□□ 1.13
COL9A2-211ENST00000496215 PSMG2Q969U7 264 aa22.11■■□□□ 1.13
COL9A2-211ENST00000496215 TMLHEQ9NVH6 421 aa22.11■■□□□ 1.13
COL9A2-211ENST00000496215 MOSPD3O75425 235 aa22.1■■□□□ 1.13
COL9A2-211ENST00000496215 CFHP08603 1231 aa22.1■■□□□ 1.13
COL9A2-211ENST00000496215 HAPLN1P10915 354 aaPredicted RBP22.1■■□□□ 1.13
COL9A2-211ENST00000496215 NPR3P17342 541 aa22.1■■□□□ 1.13
COL9A2-211ENST00000496215 WARSP23381 471 aaKnown RBP22.1■■□□□ 1.13
COL9A2-211ENST00000496215 PLA2G5P39877 138 aa22.1■■□□□ 1.13
COL9A2-211ENST00000496215 MYL6P60660 151 aa22.1■■□□□ 1.13
COL9A2-211ENST00000496215 DLG4P78352 724 aa22.1■■□□□ 1.13
COL9A2-211ENST00000496215 ZNF699Q32M78 642 aa22.1■■□□□ 1.13
COL9A2-211ENST00000496215 WDR72Q3MJ13 1102 aa22.1■■□□□ 1.13
COL9A2-211ENST00000496215 ZNF658Q5TYW1 1059 aaPredicted RBP22.1■■□□□ 1.13
COL9A2-211ENST00000496215 CWF19L1Q69YN2 538 aaKnown RBP22.1■■□□□ 1.13
COL9A2-211ENST00000496215 ERCC4Q92889 916 aaPredicted RBP22.1■■□□□ 1.13
COL9A2-211ENST00000496215 KXD1Q9BQD3 176 aa22.1■■□□□ 1.13
COL9A2-211ENST00000496215 LPIN3Q9BQK8 851 aa22.1■■□□□ 1.13
COL9A2-211ENST00000496215 GTPBP4Q9BZE4 634 aaKnown RBP22.1■■□□□ 1.13
COL9A2-211ENST00000496215 MFSD1Q9H3U5 465 aa22.1■■□□□ 1.13
COL9A2-211ENST00000496215 ABCB6Q9NP58 842 aa22.1■■□□□ 1.13
COL9A2-211ENST00000496215 HCRTO43612 131 aa22.09■■□□□ 1.13
COL9A2-211ENST00000496215 FGF19O95750 216 aa22.09■■□□□ 1.13
COL9A2-211ENST00000496215 NCOA4Q13772 614 aa22.09■■□□□ 1.13
COL9A2-211ENST00000496215 EDRF1Q3B7T1 1238 aa22.09■■□□□ 1.13
COL9A2-211ENST00000496215 INTS8Q75QN2 995 aaKnown RBP22.09■■□□□ 1.13
COL9A2-211ENST00000496215 FAM186BQ8IYM0 893 aa22.09■■□□□ 1.13
COL9A2-211ENST00000496215 TMEM105Q8N8V8 129 aa22.09■■□□□ 1.13
COL9A2-211ENST00000496215 SPATA20Q8TB22 786 aa22.09■■□□□ 1.13
COL9A2-211ENST00000496215 SHKBP1Q8TBC3 707 aa22.09■■□□□ 1.13
COL9A2-211ENST00000496215 PKMYT1Q99640 499 aa22.09■■□□□ 1.13
COL9A2-211ENST00000496215 SYT15Q9BQS2 421 aa22.09■■□□□ 1.13
COL9A2-211ENST00000496215 PI4K2AQ9BTU6 479 aa22.09■■□□□ 1.13
COL9A2-211ENST00000496215 LRRC3Q9BY71 257 aa22.09■■□□□ 1.13
COL9A2-211ENST00000496215 XYLT2Q9H1B5 865 aa22.09■■□□□ 1.13
COL9A2-211ENST00000496215 SLITRK6Q9H5Y7 841 aa22.09■■□□□ 1.13
COL9A2-211ENST00000496215 CDH9Q9ULB4 789 aa22.09■■□□□ 1.13
COL9A2-211ENST00000496215 PCDHA5Q9Y5H7 936 aa22.09■■□□□ 1.13
COL9A2-211ENST00000496215 A0A1W2PRU2 124 aa22.08■■□□□ 1.13
COL9A2-211ENST00000496215 KRBA1A5PL33 1030 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms