RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 MARCH11A6NNE9 402 aa7.07□□□□□ -1.28
CCDC39-207ENST00000495817 F8W8V4 182 aa7.07□□□□□ -1.28
CCDC39-207ENST00000495817 RPS6KA4O75676 772 aa7.07□□□□□ -1.28
CCDC39-207ENST00000495817 GNAI2P04899 355 aa7.07□□□□□ -1.28
CCDC39-207ENST00000495817 NR4A1P22736 598 aa7.07□□□□□ -1.28
CCDC39-207ENST00000495817 PPM1AP35813 382 aa7.07□□□□□ -1.28
CCDC39-207ENST00000495817 BMPR1AP36894 532 aa7.07□□□□□ -1.28
CCDC39-207ENST00000495817 TRAPPC10P48553 1259 aa7.07□□□□□ -1.28
CCDC39-207ENST00000495817 BEAN1Q3B7T3 259 aa7.07□□□□□ -1.28
CCDC39-207ENST00000495817 TIGD2Q4W5G0 525 aa7.07□□□□□ -1.28
CCDC39-207ENST00000495817 SLC44A4Q53GD3 710 aa7.07□□□□□ -1.28
CCDC39-207ENST00000495817 LY6G5CQ5SRR4 150 aa7.07□□□□□ -1.28
CCDC39-207ENST00000495817 METRNLQ641Q3 311 aa7.07□□□□□ -1.28
CCDC39-207ENST00000495817 HIBCHQ6NVY1 386 aaPredicted RBP7.07□□□□□ -1.28
CCDC39-207ENST00000495817 UBE3BQ7Z3V4 1068 aa7.07□□□□□ -1.28
CCDC39-207ENST00000495817 MRGPREQ86SM8 312 aa7.07□□□□□ -1.28
CCDC39-207ENST00000495817 SKAP1Q86WV1 359 aa7.07□□□□□ -1.28
CCDC39-207ENST00000495817 POF1BQ8WVV4 589 aa7.07□□□□□ -1.28
CCDC39-207ENST00000495817 SCAMP4Q969E2 229 aa7.07□□□□□ -1.28
CCDC39-207ENST00000495817 SORCS2Q96PQ0 1159 aa7.07□□□□□ -1.28
CCDC39-207ENST00000495817 PRRX2Q99811 253 aa7.07□□□□□ -1.28
CCDC39-207ENST00000495817 ZNF518BQ9C0D4 1074 aa7.07□□□□□ -1.28
CCDC39-207ENST00000495817 SERHLQ9NQF3 203 aa7.07□□□□□ -1.28
CCDC39-207ENST00000495817 HS3ST4Q9Y661 456 aa7.07□□□□□ -1.28
CCDC39-207ENST00000495817 FPGT-TNNI3KV9GXZ4 949 aa7.07□□□□□ -1.28
CCDC39-207ENST00000495817 A0A1W2PPC4 97 aa7.06□□□□□ -1.28
CCDC39-207ENST00000495817 GCSHP23434 173 aa7.06□□□□□ -1.28
CCDC39-207ENST00000495817 TNFAIP2Q03169 654 aa7.06□□□□□ -1.28
CCDC39-207ENST00000495817 SLC13A2Q13183 592 aa7.06□□□□□ -1.28
CCDC39-207ENST00000495817 RAB32Q13637 225 aa7.06□□□□□ -1.28
CCDC39-207ENST00000495817 PDCD4Q53EL6 469 aaKnown RBP7.06□□□□□ -1.28
CCDC39-207ENST00000495817 INO80DQ53TQ3 878 aaPredicted RBP7.06□□□□□ -1.28
CCDC39-207ENST00000495817 C3orf38Q5JPI3 329 aa7.06□□□□□ -1.28
CCDC39-207ENST00000495817 KCNV1Q6PIU1 500 aa7.06□□□□□ -1.28
CCDC39-207ENST00000495817 MED25Q71SY5 747 aa7.06□□□□□ -1.28
CCDC39-207ENST00000495817 CCDC33Q8N5R6 958 aa7.06□□□□□ -1.28
CCDC39-207ENST00000495817 ATP11CQ8NB49 1132 aa7.06□□□□□ -1.28
CCDC39-207ENST00000495817 OR56A1Q8NGH5 318 aa7.06□□□□□ -1.28
CCDC39-207ENST00000495817 MAML1Q92585 1016 aa7.06□□□□□ -1.28
CCDC39-207ENST00000495817 KIAA1191Q96A73 305 aa7.06□□□□□ -1.28
CCDC39-207ENST00000495817 NEU1Q99519 415 aa7.06□□□□□ -1.28
CCDC39-207ENST00000495817 HERPUD2Q9BSE4 406 aa7.06□□□□□ -1.28
CCDC39-207ENST00000495817 SIK2Q9H0K1 926 aa7.06□□□□□ -1.28
CCDC39-207ENST00000495817 RNPEPQ9H4A4 650 aa7.06□□□□□ -1.28
CCDC39-207ENST00000495817 GSTO2Q9H4Y5 243 aa7.06□□□□□ -1.28
CCDC39-207ENST00000495817 PPCSQ9HAB8 311 aa7.06□□□□□ -1.28
CCDC39-207ENST00000495817 FBXO34Q9NWN3 711 aa7.06□□□□□ -1.28
CCDC39-207ENST00000495817 USP15Q9Y4E8 981 aaPredicted RBP7.06□□□□□ -1.28
CCDC39-207ENST00000495817 TMEM200CA6NKL6 621 aa7.05□□□□□ -1.28
CCDC39-207ENST00000495817 APOL1O14791 398 aa7.05□□□□□ -1.28
CCDC39-207ENST00000495817 NCR1O76036 304 aa7.05□□□□□ -1.28
CCDC39-207ENST00000495817 CHEK2O96017 543 aa7.05□□□□□ -1.28
CCDC39-207ENST00000495817 TYRP1P17643 537 aa7.05□□□□□ -1.28
CCDC39-207ENST00000495817 ABCB4P21439 1286 aa7.05□□□□□ -1.28
CCDC39-207ENST00000495817 IL6STP40189 918 aaPredicted RBP7.05□□□□□ -1.28
CCDC39-207ENST00000495817 PHKA1P46020 1223 aa7.05□□□□□ -1.28
CCDC39-207ENST00000495817 POU6F2P78424 691 aaPredicted RBP7.05□□□□□ -1.28
CCDC39-207ENST00000495817 FAM189BP81408 668 aa7.05□□□□□ -1.28
CCDC39-207ENST00000495817 HTRA4P83105 476 aaPredicted RBP7.05□□□□□ -1.28
CCDC39-207ENST00000495817 KLF10Q13118 480 aa7.05□□□□□ -1.28
CCDC39-207ENST00000495817 LMBRD2Q68DH5 695 aaPredicted RBP7.05□□□□□ -1.28
CCDC39-207ENST00000495817 MICU3Q86XE3 530 aa7.05□□□□□ -1.28
CCDC39-207ENST00000495817 LIX1LQ8IVB5 337 aa7.05□□□□□ -1.28
CCDC39-207ENST00000495817 ULK2Q8IYT8 1036 aa7.05□□□□□ -1.28
CCDC39-207ENST00000495817 FITM2Q8N6M3 262 aa7.05□□□□□ -1.28
CCDC39-207ENST00000495817 PROKR1Q8TCW9 393 aa7.05□□□□□ -1.28
CCDC39-207ENST00000495817 CRB3Q9BUF7 120 aa7.05□□□□□ -1.28
CCDC39-207ENST00000495817 ZNF768Q9H5H4 540 aaKnown RBP7.05□□□□□ -1.28
CCDC39-207ENST00000495817 MYO1AQ9UBC5 1043 aa7.05□□□□□ -1.28
CCDC39-207ENST00000495817 PLEKHM1Q9Y4G2 1056 aa7.05□□□□□ -1.28
CCDC39-207ENST00000495817 ZNF185O15231 689 aa7.04□□□□□ -1.28
CCDC39-207ENST00000495817 DNAJB5O75953 348 aa7.04□□□□□ -1.28
CCDC39-207ENST00000495817 CFIP05156 583 aa7.04□□□□□ -1.28
CCDC39-207ENST00000495817 ZFP36P26651 326 aaKnown RBP7.04□□□□□ -1.28
CCDC39-207ENST00000495817 RPS16P62249 146 aaKnown RBP7.04□□□□□ -1.28
CCDC39-207ENST00000495817 TCF15Q12870 199 aa7.04□□□□□ -1.28
CCDC39-207ENST00000495817 FHL2Q14192 279 aa7.04□□□□□ -1.28
CCDC39-207ENST00000495817 ARL13BQ3SXY8 428 aa7.04□□□□□ -1.28
CCDC39-207ENST00000495817 UTP14CQ5TAP6 766 aaKnown RBP7.04□□□□□ -1.28
CCDC39-207ENST00000495817 USP37Q86T82 979 aa7.04□□□□□ -1.28
CCDC39-207ENST00000495817 SDR16C5Q8N3Y7 309 aa7.04□□□□□ -1.28
CCDC39-207ENST00000495817 NEU4Q8WWR8 484 aaPredicted RBP7.04□□□□□ -1.28
CCDC39-207ENST00000495817 TMEM41AQ96HV5 264 aa7.04□□□□□ -1.28
CCDC39-207ENST00000495817 A1CFQ9NQ94 594 aaKnown RBP7.04□□□□□ -1.28
CCDC39-207ENST00000495817 SLC45A2Q9UMX9 530 aa7.04□□□□□ -1.28
CCDC39-207ENST00000495817 A0A087WWL8 130 aa7.03□□□□□ -1.28
CCDC39-207ENST00000495817 MBD3L4A6NDZ8 208 aaPredicted RBP7.03□□□□□ -1.28
CCDC39-207ENST00000495817 MBD3L3A6NE82 208 aaPredicted RBP7.03□□□□□ -1.28
CCDC39-207ENST00000495817 ZNF785A8K8V0 405 aa7.03□□□□□ -1.28
CCDC39-207ENST00000495817 ADAMTS3O15072 1205 aa7.03□□□□□ -1.28
CCDC39-207ENST00000495817 SLPIP03973 132 aa7.03□□□□□ -1.28
CCDC39-207ENST00000495817 ANXA2P07355 339 aaKnown RBP7.03□□□□□ -1.28
CCDC39-207ENST00000495817 DDX6P26196 483 aaKnown RBP eCLIP7.03□□□□□ -1.28
CCDC39-207ENST00000495817 TECP42680 631 aa7.03□□□□□ -1.28
CCDC39-207ENST00000495817 PSMC1P62191 440 aaKnown RBP7.03□□□□□ -1.28
CCDC39-207ENST00000495817 CTBP1Q13363 440 aa7.03□□□□□ -1.28
CCDC39-207ENST00000495817 PMS2P11Q13670 270 aa7.03□□□□□ -1.28
CCDC39-207ENST00000495817 PTPAQ15257 358 aa7.03□□□□□ -1.28
CCDC39-207ENST00000495817 ANO1Q5XXA6 986 aa7.03□□□□□ -1.28
CCDC39-207ENST00000495817 BEND5Q7L4P6 421 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms