RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 ACAT1P24752 427 aaKnown RBP20.77■□□□□ 0.92
ATG3-208ENST00000495756 DNAJB1P25685 340 aa20.77■□□□□ 0.92
ATG3-208ENST00000495756 SOX5P35711 763 aa20.77■□□□□ 0.92
ATG3-208ENST00000495756 STAT1P42224 750 aa20.77■□□□□ 0.92
ATG3-208ENST00000495756 RAD23BP54727 409 aa20.77■□□□□ 0.92
ATG3-208ENST00000495756 ORC1Q13415 861 aa20.77■□□□□ 0.92
ATG3-208ENST00000495756 CTXN3Q4LDR2 81 aa20.77■□□□□ 0.92
ATG3-208ENST00000495756 ZNF394Q53GI3 561 aa20.77■□□□□ 0.92
ATG3-208ENST00000495756 ZNF280DQ6N043 979 aa20.77■□□□□ 0.92
ATG3-208ENST00000495756 PDXDC1Q6P996 788 aa20.77■□□□□ 0.92
ATG3-208ENST00000495756 PRSS55Q6UWB4 352 aaPredicted RBP20.77■□□□□ 0.92
ATG3-208ENST00000495756 RBBP8NLQ8NC74 664 aaPredicted RBP20.77■□□□□ 0.92
ATG3-208ENST00000495756 ACBD6Q9BR61 282 aa20.77■□□□□ 0.92
ATG3-208ENST00000495756 IMPACTQ9P2X3 320 aa20.77■□□□□ 0.92
ATG3-208ENST00000495756 C2CD2LO14523 706 aa20.76■□□□□ 0.91
ATG3-208ENST00000495756 TBC1D4O60343 1298 aa20.76■□□□□ 0.91
ATG3-208ENST00000495756 MFAP3LO75121 409 aa20.76■□□□□ 0.91
ATG3-208ENST00000495756 PCSK1P29120 753 aa20.76■□□□□ 0.91
ATG3-208ENST00000495756 KRT9P35527 623 aa20.76■□□□□ 0.91
ATG3-208ENST00000495756 ERVFC1P60507 584 aa20.76■□□□□ 0.91
ATG3-208ENST00000495756 PSMD5Q16401 504 aa20.76■□□□□ 0.91
ATG3-208ENST00000495756 GPR65Q8IYL9 337 aa20.76■□□□□ 0.91
ATG3-208ENST00000495756 SLC4A11Q8NBS3 891 aa20.76■□□□□ 0.91
ATG3-208ENST00000495756 OR10T2Q8NGX3 314 aa20.76■□□□□ 0.91
ATG3-208ENST00000495756 TMEM176AQ96HP8 235 aa20.76■□□□□ 0.91
ATG3-208ENST00000495756 NUCKS1Q9H1E3 243 aaKnown RBP20.76■□□□□ 0.91
ATG3-208ENST00000495756 DPEP3Q9H4B8 488 aa20.76■□□□□ 0.91
ATG3-208ENST00000495756 MRPL17Q9NRX2 175 aaKnown RBP20.76■□□□□ 0.91
ATG3-208ENST00000495756 AKR1B15C9JRZ8 316 aaPredicted RBP20.75■□□□□ 0.91
ATG3-208ENST00000495756 CYP26A1O43174 497 aa20.75■□□□□ 0.91
ATG3-208ENST00000495756 GFPT2O94808 682 aa20.75■□□□□ 0.91
ATG3-208ENST00000495756 CAMK1Q14012 370 aa20.75■□□□□ 0.91
ATG3-208ENST00000495756 PTPN14Q15678 1187 aa20.75■□□□□ 0.91
ATG3-208ENST00000495756 TMC7Q7Z402 723 aa20.75■□□□□ 0.91
ATG3-208ENST00000495756 ACOT1Q86TX2 421 aa20.75■□□□□ 0.91
ATG3-208ENST00000495756 CNGA4Q8IV77 575 aa20.75■□□□□ 0.91
ATG3-208ENST00000495756 CRYBG2Q8N1P7 616 aa20.75■□□□□ 0.91
ATG3-208ENST00000495756 AUTS2Q8WXX7 1259 aa20.75■□□□□ 0.91
ATG3-208ENST00000495756 TNIP3Q96KP6 325 aa20.75■□□□□ 0.91
ATG3-208ENST00000495756 TCF25Q9BQ70 676 aa20.75■□□□□ 0.91
ATG3-208ENST00000495756 OXCT2Q9BYC2 517 aaPredicted RBP20.75■□□□□ 0.91
ATG3-208ENST00000495756 DNAI2Q9GZS0 605 aa20.75■□□□□ 0.91
ATG3-208ENST00000495756 TLR9Q9NR96 1032 aa20.75■□□□□ 0.91
ATG3-208ENST00000495756 MTRRQ9UBK8 725 aa20.75■□□□□ 0.91
ATG3-208ENST00000495756 CDH9Q9ULB4 789 aa20.75■□□□□ 0.91
ATG3-208ENST00000495756 SSX2IPQ9Y2D8 614 aa20.75■□□□□ 0.91
ATG3-208ENST00000495756 BACE2Q9Y5Z0 518 aa20.75■□□□□ 0.91
ATG3-208ENST00000495756 EPOPA6NHQ4 379 aa20.75■□□□□ 0.91
ATG3-208ENST00000495756 OR6C75A6NL08 312 aa20.75■□□□□ 0.91
ATG3-208ENST00000495756 LILRB3O75022 631 aa20.75■□□□□ 0.91
ATG3-208ENST00000495756 PAEPP09466 180 aa20.75■□□□□ 0.91
ATG3-208ENST00000495756 CLCN1P35523 988 aa20.75■□□□□ 0.91
ATG3-208ENST00000495756 ADKP55263 362 aaKnown RBP20.75■□□□□ 0.91
ATG3-208ENST00000495756 PSMC1P62191 440 aaKnown RBP20.75■□□□□ 0.91
ATG3-208ENST00000495756 GOLGA8FQ08AF8 430 aa20.75■□□□□ 0.91
ATG3-208ENST00000495756 GOLGA8DPQ0D2H9 430 aa20.75■□□□□ 0.91
ATG3-208ENST00000495756 SFMBT2Q5VUG0 894 aa20.75■□□□□ 0.91
ATG3-208ENST00000495756 RSPO2Q6UXX9 243 aaPredicted RBP20.75■□□□□ 0.91
ATG3-208ENST00000495756 GPIHBP1Q8IV16 184 aa20.75■□□□□ 0.91
ATG3-208ENST00000495756 FMNL3Q8IVF7 1028 aa20.75■□□□□ 0.91
ATG3-208ENST00000495756 SYN2Q92777 582 aaPredicted RBP20.75■□□□□ 0.91
ATG3-208ENST00000495756 DNAJC7Q99615 494 aa20.75■□□□□ 0.91
ATG3-208ENST00000495756 SYT15Q9BQS2 421 aa20.75■□□□□ 0.91
ATG3-208ENST00000495756 ZNF576Q9H609 170 aa20.75■□□□□ 0.91
ATG3-208ENST00000495756 ENTPD7Q9NQZ7 604 aa20.75■□□□□ 0.91
ATG3-208ENST00000495756 AIPL1Q9NZN9 384 aa20.75■□□□□ 0.91
ATG3-208ENST00000495756 ATP2C2O75185 946 aa20.74■□□□□ 0.91
ATG3-208ENST00000495756 CXCL14O95715 111 aa20.74■□□□□ 0.91
ATG3-208ENST00000495756 PTPN1P18031 435 aaKnown RBP20.74■□□□□ 0.91
ATG3-208ENST00000495756 TSPY1Q01534 308 aa20.74■□□□□ 0.91
ATG3-208ENST00000495756 ARID5AQ03989 594 aa20.74■□□□□ 0.91
ATG3-208ENST00000495756 BMS1Q14692 1282 aaKnown RBP20.74■□□□□ 0.91
ATG3-208ENST00000495756 ARID5BQ14865 1188 aa20.74■□□□□ 0.91
ATG3-208ENST00000495756 INTS6LQ5JSJ4 861 aaKnown RBP20.74■□□□□ 0.91
ATG3-208ENST00000495756 E4F1Q66K89 784 aaPredicted RBP20.74■□□□□ 0.91
ATG3-208ENST00000495756 TC2NQ8N9U0 490 aa20.74■□□□□ 0.91
ATG3-208ENST00000495756 B3GALNT2Q8NCR0 500 aa20.74■□□□□ 0.91
ATG3-208ENST00000495756 OR8K1Q8NGG5 319 aa20.74■□□□□ 0.91
ATG3-208ENST00000495756 GDPD5Q8WTR4 605 aa20.74■□□□□ 0.91
ATG3-208ENST00000495756 HEXIM2Q96MH2 286 aaKnown RBP20.74■□□□□ 0.91
ATG3-208ENST00000495756 TMEM209Q96SK2 561 aa20.74■□□□□ 0.91
ATG3-208ENST00000495756 ACP6Q9NPH0 428 aa20.74■□□□□ 0.91
ATG3-208ENST00000495756 CRTAC1Q9NQ79 661 aa20.74■□□□□ 0.91
ATG3-208ENST00000495756 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.74■□□□□ 0.91
ATG3-208ENST00000495756 IRAK3Q9Y616 596 aa20.74■□□□□ 0.91
ATG3-208ENST00000495756 GOLGA6L6A8MZA4 724 aa20.73■□□□□ 0.91
ATG3-208ENST00000495756 FSCN2O14926 492 aa20.73■□□□□ 0.91
ATG3-208ENST00000495756 FERP16591 822 aa20.73■□□□□ 0.91
ATG3-208ENST00000495756 RPL17P18621 184 aaKnown RBP20.73■□□□□ 0.91
ATG3-208ENST00000495756 BPIFB4P59827 614 aa20.73■□□□□ 0.91
ATG3-208ENST00000495756 CREMQ03060 361 aa20.73■□□□□ 0.91
ATG3-208ENST00000495756 PTK2Q05397 1052 aa20.73■□□□□ 0.91
ATG3-208ENST00000495756 SMC1AQ14683 1233 aaKnown RBP20.73■□□□□ 0.91
ATG3-208ENST00000495756 ASIC2Q16515 512 aa20.73■□□□□ 0.91
ATG3-208ENST00000495756 SLC8B1Q6J4K2 584 aa20.73■□□□□ 0.91
ATG3-208ENST00000495756 IRF2BP2Q7Z5L9 587 aa20.73■□□□□ 0.91
ATG3-208ENST00000495756 SLC47A2Q86VL8 602 aa20.73■□□□□ 0.91
ATG3-208ENST00000495756 PDLIM2Q96JY6 352 aa20.73■□□□□ 0.91
ATG3-208ENST00000495756 PKMYT1Q99640 499 aa20.73■□□□□ 0.91
ATG3-208ENST00000495756 LPIN3Q9BQK8 851 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms