RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 FOXC1Q12948 553 aa14.6□□□□□ -0.07
COL1A1-209ENST00000495677 RINT1Q6NUQ1 792 aa14.6□□□□□ -0.07
COL1A1-209ENST00000495677 DSTYKQ6XUX3 929 aa14.6□□□□□ -0.07
COL1A1-209ENST00000495677 C1orf186Q6ZWK4 172 aa14.6□□□□□ -0.07
COL1A1-209ENST00000495677 TTC9BQ8N6N2 239 aa14.6□□□□□ -0.07
COL1A1-209ENST00000495677 C4orf32Q8N8J7 132 aa14.6□□□□□ -0.07
COL1A1-209ENST00000495677 C2orf15Q8WU43 125 aaKnown RBP14.6□□□□□ -0.07
COL1A1-209ENST00000495677 SPIRE2Q8WWL2 714 aa14.6□□□□□ -0.07
COL1A1-209ENST00000495677 GTF3C6Q969F1 213 aa14.6□□□□□ -0.07
COL1A1-209ENST00000495677 SCNM1Q9BWG6 230 aa14.6□□□□□ -0.07
COL1A1-209ENST00000495677 FBRSL1Q9HCM7 1045 aaKnown RBP14.6□□□□□ -0.07
COL1A1-209ENST00000495677 DDX19AQ9NUU7 478 aaKnown RBP14.6□□□□□ -0.07
COL1A1-209ENST00000495677 DNM3Q9UQ16 869 aa14.6□□□□□ -0.07
COL1A1-209ENST00000495677 ADAMTS9Q9P2N4 1935 aa14.6□□□□□ -0.07
COL1A1-209ENST00000495677 AKAP13Q12802 2813 aa14.6□□□□□ -0.07
COL1A1-209ENST00000495677 PKD1L2Q7Z442 2459 aa14.59□□□□□ -0.07
COL1A1-209ENST00000495677 KHNYNO15037 678 aaKnown RBP14.59□□□□□ -0.07
COL1A1-209ENST00000495677 APBB3O95704 486 aa14.59□□□□□ -0.07
COL1A1-209ENST00000495677 F11P03951 625 aa14.59□□□□□ -0.07
COL1A1-209ENST00000495677 CYP4F8P98187 520 aa14.59□□□□□ -0.07
COL1A1-209ENST00000495677 STRN3Q13033 797 aa14.59□□□□□ -0.07
COL1A1-209ENST00000495677 ZNF268Q14587 947 aaPredicted RBP14.59□□□□□ -0.07
COL1A1-209ENST00000495677 VEPH1Q14D04 833 aa14.59□□□□□ -0.07
COL1A1-209ENST00000495677 KYAT1Q16773 422 aa14.59□□□□□ -0.07
COL1A1-209ENST00000495677 ME3Q16798 604 aa14.59□□□□□ -0.07
COL1A1-209ENST00000495677 PMS2CLQ68D20 193 aa14.59□□□□□ -0.07
COL1A1-209ENST00000495677 IGSF22Q8N9C0 903 aa14.59□□□□□ -0.07
COL1A1-209ENST00000495677 KIF12Q96FN5 646 aa14.59□□□□□ -0.07
COL1A1-209ENST00000495677 GCNAQ96QF7 691 aa14.59□□□□□ -0.07
COL1A1-209ENST00000495677 EBF3Q9H4W6 596 aa14.59□□□□□ -0.07
COL1A1-209ENST00000495677 TMEM9BQ9NQ34 198 aa14.59□□□□□ -0.07
COL1A1-209ENST00000495677 TDP1Q9NUW8 608 aa14.59□□□□□ -0.07
COL1A1-209ENST00000495677 LRWD1Q9UFC0 647 aa14.59□□□□□ -0.07
COL1A1-209ENST00000495677 MYOFQ9NZM1 2061 aa14.59□□□□□ -0.07
COL1A1-209ENST00000495677 SLC16A4O15374 487 aa14.58□□□□□ -0.08
COL1A1-209ENST00000495677 CXCL8P10145 99 aa14.58□□□□□ -0.08
COL1A1-209ENST00000495677 ATF6P18850 670 aa14.58□□□□□ -0.08
COL1A1-209ENST00000495677 GUCY2CP25092 1073 aa14.58□□□□□ -0.08
COL1A1-209ENST00000495677 AVPR1AP37288 418 aa14.58□□□□□ -0.08
COL1A1-209ENST00000495677 SMTNP53814 917 aa14.58□□□□□ -0.08
COL1A1-209ENST00000495677 DMC1Q14565 340 aa14.58□□□□□ -0.08
COL1A1-209ENST00000495677 PDGFRLQ15198 375 aa14.58□□□□□ -0.08
COL1A1-209ENST00000495677 ZNF174Q15697 407 aa14.58□□□□□ -0.08
COL1A1-209ENST00000495677 SEZ6Q53EL9 994 aa14.58□□□□□ -0.08
COL1A1-209ENST00000495677 SPATA1Q5VX52 437 aa14.58□□□□□ -0.08
COL1A1-209ENST00000495677 TMEM150AQ86TG1 271 aa14.58□□□□□ -0.08
COL1A1-209ENST00000495677 TMEM161BQ8NDZ6 487 aa14.58□□□□□ -0.08
COL1A1-209ENST00000495677 CCDC26Q8TAB7 109 aa14.58□□□□□ -0.08
COL1A1-209ENST00000495677 SPPL2BQ8TCT7 592 aa14.58□□□□□ -0.08
COL1A1-209ENST00000495677 USP13Q92995 863 aaPredicted RBP14.58□□□□□ -0.08
COL1A1-209ENST00000495677 ACDQ96AP0 544 aa14.58□□□□□ -0.08
COL1A1-209ENST00000495677 SENP8Q96LD8 212 aa14.58□□□□□ -0.08
COL1A1-209ENST00000495677 HHIPQ96QV1 700 aa14.58□□□□□ -0.08
COL1A1-209ENST00000495677 P2RY13Q9BPV8 354 aa14.58□□□□□ -0.08
COL1A1-209ENST00000495677 LPIN3Q9BQK8 851 aa14.58□□□□□ -0.08
COL1A1-209ENST00000495677 HAPLN2Q9GZV7 340 aa14.58□□□□□ -0.08
COL1A1-209ENST00000495677 ZCWPW1Q9H0M4 648 aa14.58□□□□□ -0.08
COL1A1-209ENST00000495677 NEUROG3Q9Y4Z2 214 aa14.58□□□□□ -0.08
COL1A1-209ENST00000495677 E9PMD0 336 aa14.57□□□□□ -0.08
COL1A1-209ENST00000495677 DCLK1O15075 740 aa14.57□□□□□ -0.08
COL1A1-209ENST00000495677 SOAT2O75908 522 aa14.57□□□□□ -0.08
COL1A1-209ENST00000495677 TOP3BO95985 862 aaKnown RBP14.57□□□□□ -0.08
COL1A1-209ENST00000495677 MAPTP10636 758 aaKnown RBP14.57□□□□□ -0.08
COL1A1-209ENST00000495677 ODC1P11926 461 aa14.57□□□□□ -0.08
COL1A1-209ENST00000495677 HARSP12081 509 aaKnown RBP14.57□□□□□ -0.08
COL1A1-209ENST00000495677 GJA4P35212 333 aa14.57□□□□□ -0.08
COL1A1-209ENST00000495677 TRAPPC10P48553 1259 aa14.57□□□□□ -0.08
COL1A1-209ENST00000495677 ANAPC15P60006 121 aa14.57□□□□□ -0.08
COL1A1-209ENST00000495677 PPP2R3AQ06190 1150 aa14.57□□□□□ -0.08
COL1A1-209ENST00000495677 RING1Q06587 406 aa14.57□□□□□ -0.08
COL1A1-209ENST00000495677 SAFBQ15424 915 aaKnown RBP eCLIP14.57□□□□□ -0.08
COL1A1-209ENST00000495677 USP39Q53GS9 565 aaKnown RBP14.57□□□□□ -0.08
COL1A1-209ENST00000495677 TRIM68Q6AZZ1 485 aa14.57□□□□□ -0.08
COL1A1-209ENST00000495677 RASSF3Q86WH2 238 aa14.57□□□□□ -0.08
COL1A1-209ENST00000495677 CD302Q8IX05 232 aa14.57□□□□□ -0.08
COL1A1-209ENST00000495677 KCTD17Q8N5Z5 321 aa14.57□□□□□ -0.08
COL1A1-209ENST00000495677 NECAB1Q8N987 351 aa14.57□□□□□ -0.08
COL1A1-209ENST00000495677 OR10T2Q8NGX3 314 aa14.57□□□□□ -0.08
COL1A1-209ENST00000495677 RPLP0P6Q8NHW5 317 aa14.57□□□□□ -0.08
COL1A1-209ENST00000495677 RAB34Q9BZG1 259 aa14.57□□□□□ -0.08
COL1A1-209ENST00000495677 SMG9Q9H0W8 520 aaKnown RBP14.57□□□□□ -0.08
COL1A1-209ENST00000495677 FOXP1Q9H334 677 aaPredicted RBP14.57□□□□□ -0.08
COL1A1-209ENST00000495677 POLR3BQ9NW08 1133 aaPredicted RBP14.57□□□□□ -0.08
COL1A1-209ENST00000495677 EVLQ9UI08 416 aaPredicted RBP14.57□□□□□ -0.08
COL1A1-209ENST00000495677 DSEQ9UL01 958 aa14.57□□□□□ -0.08
COL1A1-209ENST00000495677 CCL26Q9Y258 94 aa14.57□□□□□ -0.08
COL1A1-209ENST00000495677 MSRB2Q9Y3D2 182 aa14.57□□□□□ -0.08
COL1A1-209ENST00000495677 FAM221BA6H8Z2 402 aa14.56□□□□□ -0.08
COL1A1-209ENST00000495677 LACTBL1A8MY62 500 aa14.56□□□□□ -0.08
COL1A1-209ENST00000495677 PIRO00625 290 aa14.56□□□□□ -0.08
COL1A1-209ENST00000495677 HAPLN1P10915 354 aaPredicted RBP14.56□□□□□ -0.08
COL1A1-209ENST00000495677 PLS3P13797 630 aa14.56□□□□□ -0.08
COL1A1-209ENST00000495677 HMGA1P17096 107 aaKnown RBP14.56□□□□□ -0.08
COL1A1-209ENST00000495677 SPINK2P20155 84 aa14.56□□□□□ -0.08
COL1A1-209ENST00000495677 NLRP12P59046 1061 aa14.56□□□□□ -0.08
COL1A1-209ENST00000495677 IRX4P78413 519 aa14.56□□□□□ -0.08
COL1A1-209ENST00000495677 SPAG1Q07617 926 aa14.56□□□□□ -0.08
COL1A1-209ENST00000495677 BFSP1Q12934 665 aa14.56□□□□□ -0.08
COL1A1-209ENST00000495677 MGAT5BQ3V5L5 792 aa14.56□□□□□ -0.08
COL1A1-209ENST00000495677 CC2D1AQ6P1N0 951 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms