RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 ECI2O75521 394 aa35.68■■■■□ 3.3
CBX4-203ENST00000494546 TEAD2Q15562 447 aa35.68■■■■□ 3.3
CBX4-203ENST00000494546 TANGO2Q6ICL3 276 aa35.68■■■■□ 3.3
CBX4-203ENST00000494546 DNAJB7Q7Z6W7 309 aaPredicted RBP35.68■■■■□ 3.3
CBX4-203ENST00000494546 TOP6BLQ8N6T0 577 aa35.68■■■■□ 3.3
CBX4-203ENST00000494546 SPPL2BQ8TCT7 592 aa35.68■■■■□ 3.3
CBX4-203ENST00000494546 CCDC47Q96A33 483 aaKnown RBP35.68■■■■□ 3.3
CBX4-203ENST00000494546 LRRC3Q9BY71 257 aa35.68■■■■□ 3.3
CBX4-203ENST00000494546 ARHGEF3Q9NR81 526 aa35.68■■■■□ 3.3
CBX4-203ENST00000494546 ZNF202O95125 648 aa35.67■■■■□ 3.3
CBX4-203ENST00000494546 ACAT1P24752 427 aaKnown RBP35.67■■■■□ 3.3
CBX4-203ENST00000494546 MYL7Q01449 175 aa35.67■■■■□ 3.3
CBX4-203ENST00000494546 FAM78AQ5JUQ0 283 aa35.67■■■■□ 3.3
CBX4-203ENST00000494546 ITIH5Q86UX2 942 aa35.67■■■■□ 3.3
CBX4-203ENST00000494546 TMC8Q8IU68 726 aa35.67■■■■□ 3.3
CBX4-203ENST00000494546 ADGRF2Q8IZF7 708 aa35.67■■■■□ 3.3
CBX4-203ENST00000494546 PSMG2Q969U7 264 aa35.67■■■■□ 3.3
CBX4-203ENST00000494546 ZSWIM3Q96MP5 696 aa35.67■■■■□ 3.3
CBX4-203ENST00000494546 LPIN3Q9BQK8 851 aa35.67■■■■□ 3.3
CBX4-203ENST00000494546 PLA2G2FQ9BZM2 168 aa35.67■■■■□ 3.3
CBX4-203ENST00000494546 TMLHEQ9NVH6 421 aa35.67■■■■□ 3.3
CBX4-203ENST00000494546 PCDHB5Q9Y5E4 795 aa35.67■■■■□ 3.3
CBX4-203ENST00000494546 MUC6Q6W4X9 2439 aa35.67■■■■□ 3.3
CBX4-203ENST00000494546 A0A1W2PRU2 124 aa35.66■■■■□ 3.3
CBX4-203ENST00000494546 NHLH1Q02575 133 aa35.66■■■■□ 3.3
CBX4-203ENST00000494546 VEPH1Q14D04 833 aa35.66■■■■□ 3.3
CBX4-203ENST00000494546 OSTM1Q86WC4 334 aa35.66■■■■□ 3.3
CBX4-203ENST00000494546 SHKBP1Q8TBC3 707 aa35.66■■■■□ 3.3
CBX4-203ENST00000494546 ACBD6Q9BR61 282 aa35.66■■■■□ 3.3
CBX4-203ENST00000494546 SLITRK6Q9H5Y7 841 aa35.66■■■■□ 3.3
CBX4-203ENST00000494546 PTPN5P54829 565 aa35.65■■■■□ 3.3
CBX4-203ENST00000494546 DPYDQ12882 1025 aa35.65■■■■□ 3.3
CBX4-203ENST00000494546 SOWAHAQ2M3V2 549 aa35.65■■■■□ 3.3
CBX4-203ENST00000494546 ELSPBP1Q96BH3 223 aa35.65■■■■□ 3.3
CBX4-203ENST00000494546 ASB16Q96NS5 453 aa35.65■■■■□ 3.3
CBX4-203ENST00000494546 ZFP14Q9HCL3 533 aa35.65■■■■□ 3.3
CBX4-203ENST00000494546 ZNF334Q9HCZ1 680 aaPredicted RBP35.65■■■■□ 3.3
CBX4-203ENST00000494546 PI15O43692 258 aa35.64■■■■□ 3.3
CBX4-203ENST00000494546 HAPLN1P10915 354 aaPredicted RBP35.64■■■■□ 3.3
CBX4-203ENST00000494546 ATF6P18850 670 aa35.64■■■■□ 3.3
CBX4-203ENST00000494546 AOC1P19801 751 aa35.64■■■■□ 3.3
CBX4-203ENST00000494546 LHX1P48742 406 aa35.64■■■■□ 3.3
CBX4-203ENST00000494546 TCF15Q12870 199 aa35.64■■■■□ 3.3
CBX4-203ENST00000494546 NFE2Q16621 373 aaPredicted RBP35.64■■■■□ 3.3
CBX4-203ENST00000494546 SPATA18Q8TC71 538 aa35.64■■■■□ 3.3
CBX4-203ENST00000494546 GIPC2Q8TF65 315 aa35.64■■■■□ 3.3
CBX4-203ENST00000494546 KCTD10Q9H3F6 313 aa35.64■■■■□ 3.3
CBX4-203ENST00000494546 TBC1D17Q9HA65 648 aa35.64■■■■□ 3.3
CBX4-203ENST00000494546 HCRTO43612 131 aa35.63■■■■□ 3.29
CBX4-203ENST00000494546 FCARP24071 287 aa35.63■■■■□ 3.29
CBX4-203ENST00000494546 TAF12Q16514 161 aa35.63■■■■□ 3.29
CBX4-203ENST00000494546 INTS6LQ5JSJ4 861 aaKnown RBP35.63■■■■□ 3.29
CBX4-203ENST00000494546 ZNF516Q92618 1163 aa35.63■■■■□ 3.29
CBX4-203ENST00000494546 SMARCD2Q92925 531 aa35.63■■■■□ 3.29
CBX4-203ENST00000494546 MMS19Q96T76 1030 aa35.63■■■■□ 3.29
CBX4-203ENST00000494546 PI4K2AQ9BTU6 479 aa35.63■■■■□ 3.29
CBX4-203ENST00000494546 GZF1Q9H116 711 aaPredicted RBP35.63■■■■□ 3.29
CBX4-203ENST00000494546 GOLGA6L4A6NEF3 574 aa35.62■■■■□ 3.29
CBX4-203ENST00000494546 PDXKO00764 312 aa35.62■■■■□ 3.29
CBX4-203ENST00000494546 RHOBTB3O94955 611 aa35.62■■■■□ 3.29
CBX4-203ENST00000494546 CST3P01034 146 aaPredicted RBP35.62■■■■□ 3.29
CBX4-203ENST00000494546 CASP4P49662 377 aa35.62■■■■□ 3.29
CBX4-203ENST00000494546 NUBP1P53384 320 aa35.62■■■■□ 3.29
CBX4-203ENST00000494546 DPH6Q7L8W6 267 aa35.62■■■■□ 3.29
CBX4-203ENST00000494546 ZSCAN18Q8TBC5 510 aaPredicted RBP35.62■■■■□ 3.29
CBX4-203ENST00000494546 GPR88Q9GZN0 384 aa35.62■■■■□ 3.29
CBX4-203ENST00000494546 DMAC2Q9NW81 257 aa35.62■■■■□ 3.29
CBX4-203ENST00000494546 GABRDO14764 452 aa35.61■■■■□ 3.29
CBX4-203ENST00000494546 GALR2O43603 387 aaPredicted RBP35.61■■■■□ 3.29
CBX4-203ENST00000494546 NR3C1P04150 777 aa35.61■■■■□ 3.29
CBX4-203ENST00000494546 GABRR2P28476 465 aa35.61■■■■□ 3.29
CBX4-203ENST00000494546 PCSK1P29120 753 aa35.61■■■■□ 3.29
CBX4-203ENST00000494546 PFKPQ01813 784 aa35.61■■■■□ 3.29
CBX4-203ENST00000494546 TRPC3Q13507 836 aa35.61■■■■□ 3.29
CBX4-203ENST00000494546 SNW1Q13573 536 aaKnown RBP35.61■■■■□ 3.29
CBX4-203ENST00000494546 SLC9A9Q8IVB4 645 aa35.61■■■■□ 3.29
CBX4-203ENST00000494546 ATXN3LQ9H3M9 355 aa35.61■■■■□ 3.29
CBX4-203ENST00000494546 GTF3C4Q9UKN8 822 aa35.61■■■■□ 3.29
CBX4-203ENST00000494546 WDFY4Q6ZS81 3184 aa35.6■■■■□ 3.29
CBX4-203ENST00000494546 KIF20AO95235 890 aa35.6■■■■□ 3.29
CBX4-203ENST00000494546 FGF19O95750 216 aa35.6■■■■□ 3.29
CBX4-203ENST00000494546 GRM2Q14416 872 aa35.6■■■■□ 3.29
CBX4-203ENST00000494546 GAREM2Q75VX8 874 aa35.6■■■■□ 3.29
CBX4-203ENST00000494546 PLEKHO2Q8TD55 490 aa35.6■■■■□ 3.29
CBX4-203ENST00000494546 CCDC34Q96HJ3 373 aa35.6■■■■□ 3.29
CBX4-203ENST00000494546 MAPK8IP1Q9UQF2 711 aa35.6■■■■□ 3.29
CBX4-203ENST00000494546 PHACTR2O75167 634 aa35.59■■■■□ 3.29
CBX4-203ENST00000494546 VIPR2P41587 438 aa35.59■■■■□ 3.29
CBX4-203ENST00000494546 CCDC142Q17RM4 750 aa35.59■■■■□ 3.29
CBX4-203ENST00000494546 STXBP5Q5T5C0 1151 aa35.59■■■■□ 3.29
CBX4-203ENST00000494546 LIMS2Q7Z4I7 341 aa35.59■■■■□ 3.29
CBX4-203ENST00000494546 KBTBD7Q8WVZ9 684 aa35.59■■■■□ 3.29
CBX4-203ENST00000494546 SHDQ96IW2 340 aa35.59■■■■□ 3.29
CBX4-203ENST00000494546 PKMYT1Q99640 499 aa35.59■■■■□ 3.29
CBX4-203ENST00000494546 CALUO43852 315 aaPredicted RBP35.58■■■■□ 3.29
CBX4-203ENST00000494546 GPR15P49685 360 aa35.58■■■■□ 3.29
CBX4-203ENST00000494546 SLC44A4Q53GD3 710 aa35.58■■■■□ 3.29
CBX4-203ENST00000494546 PHLDB3Q6NSJ2 640 aa35.58■■■■□ 3.29
CBX4-203ENST00000494546 PARD3BQ8TEW8 1205 aa35.58■■■■□ 3.29
CBX4-203ENST00000494546 LRRIQ3A6PVS8 624 aaPredicted RBP35.57■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms