RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 HAPLN1P10915 354 aaPredicted RBP25.76■■□□□ 1.71
TTC3-224ENST00000494243 CYP4F8P98187 520 aa25.76■■□□□ 1.71
TTC3-224ENST00000494243 SMARCB1Q12824 385 aa25.76■■□□□ 1.71
TTC3-224ENST00000494243 VEPH1Q14D04 833 aa25.76■■□□□ 1.71
TTC3-224ENST00000494243 ARHGAP15Q53QZ3 475 aa25.76■■□□□ 1.71
TTC3-224ENST00000494243 CCDC73Q6ZRK6 1079 aa25.76■■□□□ 1.71
TTC3-224ENST00000494243 BRSK2Q8IWQ3 736 aa25.76■■□□□ 1.71
TTC3-224ENST00000494243 CXorf38Q8TB03 319 aa25.76■■□□□ 1.71
TTC3-224ENST00000494243 SPPL2BQ8TCT7 592 aa25.76■■□□□ 1.71
TTC3-224ENST00000494243 GIPC2Q8TF65 315 aa25.76■■□□□ 1.71
TTC3-224ENST00000494243 MSANTD3Q96H12 275 aa25.76■■□□□ 1.71
TTC3-224ENST00000494243 ZFYVE19Q96K21 471 aa25.76■■□□□ 1.71
TTC3-224ENST00000494243 C8orf33Q9H7E9 229 aaPredicted RBP25.76■■□□□ 1.71
TTC3-224ENST00000494243 TMLHEQ9NVH6 421 aa25.76■■□□□ 1.71
TTC3-224ENST00000494243 PCDHB13Q9Y5F0 798 aa25.76■■□□□ 1.71
TTC3-224ENST00000494243 NUP210Q8TEM1 1887 aaPredicted RBP25.76■■□□□ 1.71
TTC3-224ENST00000494243 DMXL1Q9Y485 3027 aa25.76■■□□□ 1.71
TTC3-224ENST00000494243 TCHHQ07283 1943 aa25.75■■□□□ 1.71
TTC3-224ENST00000494243 MYBPHLA2RUH7 354 aa25.75■■□□□ 1.71
TTC3-224ENST00000494243 IDEP14735 1019 aa25.75■■□□□ 1.71
TTC3-224ENST00000494243 TXNDC11Q6PKC3 985 aa25.75■■□□□ 1.71
TTC3-224ENST00000494243 C1orf127Q8N9H9 656 aa25.75■■□□□ 1.71
TTC3-224ENST00000494243 INTS4Q96HW7 963 aaKnown RBP25.75■■□□□ 1.71
TTC3-224ENST00000494243 SLC46A2Q9BY10 475 aa25.75■■□□□ 1.71
TTC3-224ENST00000494243 ABI2Q9NYB9 513 aaPredicted RBP25.75■■□□□ 1.71
TTC3-224ENST00000494243 GTSE1Q9NYZ3 720 aa25.75■■□□□ 1.71
TTC3-224ENST00000494243 NCDNQ9UBB6 729 aa25.75■■□□□ 1.71
TTC3-224ENST00000494243 SMG5Q9UPR3 1016 aaKnown RBP25.75■■□□□ 1.71
TTC3-224ENST00000494243 SPECC1L-ADORA2AF8WAN1 911 aa25.74■■□□□ 1.71
TTC3-224ENST00000494243 DPYSL4O14531 572 aa25.74■■□□□ 1.71
TTC3-224ENST00000494243 GARTP22102 1010 aa25.74■■□□□ 1.71
TTC3-224ENST00000494243 CDC25CP30307 473 aa25.74■■□□□ 1.71
TTC3-224ENST00000494243 POLR2BP30876 1174 aaKnown RBP25.74■■□□□ 1.71
TTC3-224ENST00000494243 STAT6P42226 847 aa25.74■■□□□ 1.71
TTC3-224ENST00000494243 KPNA1P52294 538 aaPredicted RBP25.74■■□□□ 1.71
TTC3-224ENST00000494243 TFAMQ00059 246 aaKnown RBP25.74■■□□□ 1.71
TTC3-224ENST00000494243 ARHGAP29Q52LW3 1261 aa25.74■■□□□ 1.71
TTC3-224ENST00000494243 TMEM150AQ86TG1 271 aa25.74■■□□□ 1.71
TTC3-224ENST00000494243 DCP1BQ8IZD4 617 aaKnown RBP25.74■■□□□ 1.71
TTC3-224ENST00000494243 TTC8Q8TAM2 541 aa25.74■■□□□ 1.71
TTC3-224ENST00000494243 FAM84AQ96KN4 292 aa25.74■■□□□ 1.71
TTC3-224ENST00000494243 ZNF560Q96MR9 790 aa25.74■■□□□ 1.71
TTC3-224ENST00000494243 CBWD1Q9BRT8 395 aa25.74■■□□□ 1.71
TTC3-224ENST00000494243 RBM12Q9NTZ6 932 aaKnown RBP25.74■■□□□ 1.71
TTC3-224ENST00000494243 AGAP1Q9UPQ3 857 aa25.74■■□□□ 1.71
TTC3-224ENST00000494243 GOLGA8IPA6NC78 632 aa25.73■■□□□ 1.71
TTC3-224ENST00000494243 GOLGA8JA6NMD2 632 aa25.73■■□□□ 1.71
TTC3-224ENST00000494243 LDHAP00338 332 aaKnown RBP25.73■■□□□ 1.71
TTC3-224ENST00000494243 ITGB3P05106 788 aa25.73■■□□□ 1.71
TTC3-224ENST00000494243 HMGA1P17096 107 aaKnown RBP25.73■■□□□ 1.71
TTC3-224ENST00000494243 CTHP32929 405 aa25.73■■□□□ 1.71
TTC3-224ENST00000494243 PNPLA4P41247 253 aa25.73■■□□□ 1.71
TTC3-224ENST00000494243 CCR3P51677 355 aa25.73■■□□□ 1.71
TTC3-224ENST00000494243 NRLP54845 237 aa25.73■■□□□ 1.71
TTC3-224ENST00000494243 SATB1Q01826 763 aa25.73■■□□□ 1.71
TTC3-224ENST00000494243 C1orf228Q6PIY5 440 aa25.73■■□□□ 1.71
TTC3-224ENST00000494243 RALGPS2Q86X27 583 aaPredicted RBP25.73■■□□□ 1.71
TTC3-224ENST00000494243 PDCL2Q8N4E4 241 aa25.73■■□□□ 1.71
TTC3-224ENST00000494243 BPIFB1Q8TDL5 484 aa25.73■■□□□ 1.71
TTC3-224ENST00000494243 SMG9Q9H0W8 520 aaKnown RBP25.73■■□□□ 1.71
TTC3-224ENST00000494243 PANK4Q9NVE7 773 aa25.73■■□□□ 1.71
TTC3-224ENST00000494243 RBAKQ9NYW8 714 aaPredicted RBP25.73■■□□□ 1.71
TTC3-224ENST00000494243 PCDHB5Q9Y5E4 795 aa25.73■■□□□ 1.71
TTC3-224ENST00000494243 CACNA1AO00555 2505 aa25.72■■□□□ 1.71
TTC3-224ENST00000494243 F11P03951 625 aa25.72■■□□□ 1.71
TTC3-224ENST00000494243 CXCL12P48061 93 aa25.72■■□□□ 1.71
TTC3-224ENST00000494243 TNK2Q07912 1038 aa25.72■■□□□ 1.71
TTC3-224ENST00000494243 ALCAMQ13740 583 aa25.72■■□□□ 1.71
TTC3-224ENST00000494243 SYCP3Q8IZU3 236 aa25.72■■□□□ 1.71
TTC3-224ENST00000494243 SPEM1Q8N4L4 309 aa25.72■■□□□ 1.71
TTC3-224ENST00000494243 DLL3Q9NYJ7 618 aa25.72■■□□□ 1.71
TTC3-224ENST00000494243 L1RE1Q9UN81 338 aa25.72■■□□□ 1.71
TTC3-224ENST00000494243 EXTL3O43909 919 aa25.71■■□□□ 1.71
TTC3-224ENST00000494243 PRPF6O94906 941 aaKnown RBP25.71■■□□□ 1.71
TTC3-224ENST00000494243 GPR15P49685 360 aa25.71■■□□□ 1.71
TTC3-224ENST00000494243 NLRP12P59046 1061 aa25.71■■□□□ 1.71
TTC3-224ENST00000494243 PPP2R5DQ14738 602 aa25.71■■□□□ 1.71
TTC3-224ENST00000494243 TAF12Q16514 161 aa25.71■■□□□ 1.71
TTC3-224ENST00000494243 CMTM8Q8IZV2 173 aa25.71■■□□□ 1.71
TTC3-224ENST00000494243 CACTINQ8WUQ7 758 aaKnown RBP25.71■■□□□ 1.71
TTC3-224ENST00000494243 GCNAQ96QF7 691 aa25.71■■□□□ 1.71
TTC3-224ENST00000494243 PKMYT1Q99640 499 aa25.71■■□□□ 1.71
TTC3-224ENST00000494243 PCIF1Q9H4Z3 704 aa25.71■■□□□ 1.71
TTC3-224ENST00000494243 PDE11AQ9HCR9 933 aa25.71■■□□□ 1.71
TTC3-224ENST00000494243 TULP1O00294 542 aaPredicted RBP25.7■■□□□ 1.7
TTC3-224ENST00000494243 TGM1P22735 817 aa25.7■■□□□ 1.7
TTC3-224ENST00000494243 NASPP49321 788 aaPredicted RBP25.7■■□□□ 1.7
TTC3-224ENST00000494243 LRRC32Q14392 662 aa25.7■■□□□ 1.7
TTC3-224ENST00000494243 PUM1Q14671 1186 aaKnown RBP eCLIP25.7■■□□□ 1.7
TTC3-224ENST00000494243 Q6ZS52 159 aa25.7■■□□□ 1.7
TTC3-224ENST00000494243 CSGALNACT2Q8N6G5 542 aa25.7■■□□□ 1.7
TTC3-224ENST00000494243 CELF5Q8N6W0 485 aaKnown RBP25.7■■□□□ 1.7
TTC3-224ENST00000494243 LRRC52Q8N7C0 313 aa25.7■■□□□ 1.7
TTC3-224ENST00000494243 PDILTQ8N807 584 aa25.7■■□□□ 1.7
TTC3-224ENST00000494243 GLIS3Q8NEA6 775 aa25.7■■□□□ 1.7
TTC3-224ENST00000494243 ACBD6Q9BR61 282 aa25.7■■□□□ 1.7
TTC3-224ENST00000494243 PI4K2AQ9BTU6 479 aa25.7■■□□□ 1.7
TTC3-224ENST00000494243 ZSCAN16Q9H4T2 348 aaPredicted RBP25.7■■□□□ 1.7
TTC3-224ENST00000494243 FOXD4L1Q9NU39 408 aa25.7■■□□□ 1.7
TTC3-224ENST00000494243 GDAP2Q9NXN4 497 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms