RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 CNOT10Q9H9A5 744 aaKnown RBP11.36□□□□□ -0.59
PDLIM1-205ENST00000493949 SPATA6Q9NWH7 488 aaPredicted RBP11.36□□□□□ -0.59
PDLIM1-205ENST00000493949 DMGDHQ9UI17 866 aaKnown RBP11.36□□□□□ -0.59
PDLIM1-205ENST00000493949 GMEB2Q9UKD1 530 aa11.36□□□□□ -0.59
PDLIM1-205ENST00000493949 STK24Q9Y6E0 443 aa11.36□□□□□ -0.59
PDLIM1-205ENST00000493949 GREB1Q4ZG55 1949 aa11.36□□□□□ -0.59
PDLIM1-205ENST00000493949 A0A0A6YYK5 440 aaPredicted RBP11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 KANSL1LA0AUZ9 987 aa11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 ANHXE9PGG2 379 aa11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 H0YHG0 523 aa11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 HNRNPH1P31943 449 aaKnown RBP11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 GBP2P32456 591 aaPredicted RBP11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 RDXP35241 583 aaKnown RBP11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 MDH1P40925 334 aaKnown RBP11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 FNTAP49354 379 aa11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 ALDH7A1P49419 539 aaKnown RBP11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 CLCN4P51793 760 aa11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 FKBP3Q00688 224 aaKnown RBP11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 CSTF1Q05048 431 aaKnown RBP11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 EHHADHQ08426 723 aa11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 SLC18A3Q16572 532 aa11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 TTMPQ5BVD1 217 aa11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 CLLU1OSQ5K130 101 aa11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 MEI1Q5TIA1 1274 aa11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 KLHDC7AQ5VTJ3 777 aa11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 SFMBT2Q5VUG0 894 aa11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 PLPPR4Q7Z2D5 763 aa11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 ECHDC2Q86YB7 292 aa11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 ZC3H3Q8IXZ2 948 aaKnown RBP11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 KIAA0319LQ8IZA0 1049 aa11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 ABI1Q8IZP0 508 aa11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 ACTRT1Q8TDG2 376 aa11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 AUTS2Q8WXX7 1259 aa11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 RSPH1Q8WYR4 309 aa11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 TAF4BQ92750 862 aa11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 CENPTQ96BT3 561 aa11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 MYADMQ96S97 322 aa11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 MRPL9Q9BYD2 267 aaKnown RBP11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 FAM129AQ9BZQ8 928 aa11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 AIPL1Q9NZN9 384 aa11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 TMEM59LQ9UK28 342 aa11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 FBXL5Q9UKA1 691 aa11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 LAMA1P25391 3075 aa11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 AKAP13Q12802 2813 aa11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 CLUHO75153 1309 aa11.35□□□□□ -0.59
PDLIM1-205ENST00000493949 COL4A3Q01955 1670 aa11.34□□□□□ -0.59
PDLIM1-205ENST00000493949 C5orf60A6NFR6 353 aa11.34□□□□□ -0.59
PDLIM1-205ENST00000493949 MEIS2O14770 477 aa11.34□□□□□ -0.59
PDLIM1-205ENST00000493949 ZNF185O15231 689 aa11.34□□□□□ -0.59
PDLIM1-205ENST00000493949 HEXIM1O94992 359 aaKnown RBP11.34□□□□□ -0.59
PDLIM1-205ENST00000493949 MOCS3O95396 460 aa11.34□□□□□ -0.59
PDLIM1-205ENST00000493949 GCFC2P16383 781 aaKnown RBP11.34□□□□□ -0.59
PDLIM1-205ENST00000493949 ITGB5P18084 799 aa11.34□□□□□ -0.59
PDLIM1-205ENST00000493949 CA8P35219 290 aa11.34□□□□□ -0.59
PDLIM1-205ENST00000493949 CRYBB1P53674 252 aaPredicted RBP11.34□□□□□ -0.59
PDLIM1-205ENST00000493949 NPEPPSP55786 919 aa11.34□□□□□ -0.59
PDLIM1-205ENST00000493949 ACTN3Q08043 901 aaPredicted RBP11.34□□□□□ -0.59
PDLIM1-205ENST00000493949 HTR4Q13639 388 aa11.34□□□□□ -0.59
PDLIM1-205ENST00000493949 NAA35Q5VZE5 725 aa11.34□□□□□ -0.59
PDLIM1-205ENST00000493949 LAIR1Q6GTX8 287 aa11.34□□□□□ -0.59
PDLIM1-205ENST00000493949 TYW1BQ6NUM6 668 aa11.34□□□□□ -0.59
PDLIM1-205ENST00000493949 ZNF598Q86UK7 904 aaKnown RBP11.34□□□□□ -0.59
PDLIM1-205ENST00000493949 TMEM173Q86WV6 379 aaPredicted RBP11.34□□□□□ -0.59
PDLIM1-205ENST00000493949 TEX2Q8IWB9 1127 aa11.34□□□□□ -0.59
PDLIM1-205ENST00000493949 SYCE1Q8N0S2 351 aa11.34□□□□□ -0.59
PDLIM1-205ENST00000493949 ZNF473Q8WTR7 871 aaKnown RBP11.34□□□□□ -0.59
PDLIM1-205ENST00000493949 LARP4BQ92615 738 aaKnown RBP11.34□□□□□ -0.59
PDLIM1-205ENST00000493949 NT5C3AQ9H0P0 336 aa11.34□□□□□ -0.59
PDLIM1-205ENST00000493949 GLT8D2Q9H1C3 349 aa11.34□□□□□ -0.59
PDLIM1-205ENST00000493949 PRMT8Q9NR22 394 aaPredicted RBP11.34□□□□□ -0.59
PDLIM1-205ENST00000493949 GINS2Q9Y248 185 aa11.34□□□□□ -0.59
PDLIM1-205ENST00000493949 COL4A3BPQ9Y5P4 624 aa11.34□□□□□ -0.59
PDLIM1-205ENST00000493949 MAST4O15021 2626 aa11.34□□□□□ -0.59
PDLIM1-205ENST00000493949 HELZ2Q9BYK8 2649 aaKnown RBP11.34□□□□□ -0.59
PDLIM1-205ENST00000493949 PNMA6FA0A0J9YX94 578 aa11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 LRRC53A6NM62 1247 aa11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 NT5C1B-RDH14C9J2C7 533 aa11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 PIK3CDO00329 1044 aa11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 MAFGO15525 162 aa11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 LILRB3O75022 631 aa11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 CCDC172P0C7W6 258 aa11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 MYZAPP0CAP1 466 aa11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 LAMP2P13473 410 aa11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 KLRC1P26715 233 aa11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 SLC8A1P32418 973 aa11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 LIG3P49916 1009 aa11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 SLC26A2P50443 739 aa11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 MNAT1P51948 309 aa11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 PRKCQQ04759 706 aa11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 SPEM2Q0P670 501 aa11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 STK4Q13043 487 aa11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 ITGB3BPQ13352 177 aaPredicted RBP11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 SLMAPQ14BN4 828 aa11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 EDRF1Q3B7T1 1238 aa11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 LACTB2Q53H82 288 aaPredicted RBP11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 HYIQ5T013 277 aa11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 N4BP2L1Q5TBK1 243 aaPredicted RBP11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 RSPO2Q6UXX9 243 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms