RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 BCL7CQ8WUZ0 217 aaPredicted RBP15.9■□□□□ 0.14
ACTB-213ENST00000493945 SHC3Q92529 594 aa15.9■□□□□ 0.14
ACTB-213ENST00000493945 ALG13Q9NP73 1137 aaKnown RBP15.9■□□□□ 0.14
ACTB-213ENST00000493945 SIX2Q9NPC8 291 aa15.9■□□□□ 0.14
ACTB-213ENST00000493945 LMCD1Q9NZU5 365 aa15.9■□□□□ 0.14
ACTB-213ENST00000493945 MAFFQ9ULX9 164 aa15.9■□□□□ 0.14
ACTB-213ENST00000493945 CEP83Q9Y592 693 aa15.9■□□□□ 0.14
ACTB-213ENST00000493945 C2CD2LO14523 706 aa15.89■□□□□ 0.13
ACTB-213ENST00000493945 C1RP00736 705 aa15.89■□□□□ 0.13
ACTB-213ENST00000493945 SOX5P35711 763 aa15.89■□□□□ 0.13
ACTB-213ENST00000493945 RAP1GAPP47736 663 aa15.89■□□□□ 0.13
ACTB-213ENST00000493945 GSDMDP57764 484 aa15.89■□□□□ 0.13
ACTB-213ENST00000493945 PTPN14Q15678 1187 aa15.89■□□□□ 0.13
ACTB-213ENST00000493945 INTS6LQ5JSJ4 861 aaKnown RBP15.89■□□□□ 0.13
ACTB-213ENST00000493945 RTP2Q5QGT7 225 aa15.89■□□□□ 0.13
ACTB-213ENST00000493945 SFMBT2Q5VUG0 894 aa15.89■□□□□ 0.13
ACTB-213ENST00000493945 PLPP4Q5VZY2 271 aa15.89■□□□□ 0.13
ACTB-213ENST00000493945 RBBP8NLQ8NC74 664 aaPredicted RBP15.89■□□□□ 0.13
ACTB-213ENST00000493945 KBTBD7Q8WVZ9 684 aa15.89■□□□□ 0.13
ACTB-213ENST00000493945 TMEM176AQ96HP8 235 aa15.89■□□□□ 0.13
ACTB-213ENST00000493945 GAS2L1Q99501 681 aaPredicted RBP15.89■□□□□ 0.13
ACTB-213ENST00000493945 CDCA3Q99618 268 aaPredicted RBP15.89■□□□□ 0.13
ACTB-213ENST00000493945 MRPL45Q9BRJ2 306 aaKnown RBP15.89■□□□□ 0.13
ACTB-213ENST00000493945 HESX1Q9UBX0 185 aa15.89■□□□□ 0.13
ACTB-213ENST00000493945 CAPN11Q9UMQ6 739 aa15.89■□□□□ 0.13
ACTB-213ENST00000493945 TIMM13Q9Y5L4 95 aaPredicted RBP15.89■□□□□ 0.13
ACTB-213ENST00000493945 BZW2Q9Y6E2 419 aaKnown RBP15.89■□□□□ 0.13
ACTB-213ENST00000493945 MYO9BQ13459 2157 aa15.88■□□□□ 0.13
ACTB-213ENST00000493945 AKR1B15C9JRZ8 316 aaPredicted RBP15.88■□□□□ 0.13
ACTB-213ENST00000493945 CXCL14O95715 111 aa15.88■□□□□ 0.13
ACTB-213ENST00000493945 EFEMP2O95967 443 aa15.88■□□□□ 0.13
ACTB-213ENST00000493945 CD19P15391 556 aa15.88■□□□□ 0.13
ACTB-213ENST00000493945 ELF1P32519 619 aa15.88■□□□□ 0.13
ACTB-213ENST00000493945 KLK7P49862 253 aa15.88■□□□□ 0.13
ACTB-213ENST00000493945 CDH8P55286 799 aa15.88■□□□□ 0.13
ACTB-213ENST00000493945 ASIC2Q16515 512 aa15.88■□□□□ 0.13
ACTB-213ENST00000493945 SGO2Q562F6 1265 aa15.88■□□□□ 0.13
ACTB-213ENST00000493945 TPGS2Q68CL5 300 aa15.88■□□□□ 0.13
ACTB-213ENST00000493945 SLC8B1Q6J4K2 584 aa15.88■□□□□ 0.13
ACTB-213ENST00000493945 ZNF677Q86XU0 584 aa15.88■□□□□ 0.13
ACTB-213ENST00000493945 B3GALNT2Q8NCR0 500 aa15.88■□□□□ 0.13
ACTB-213ENST00000493945 GDPD5Q8WTR4 605 aa15.88■□□□□ 0.13
ACTB-213ENST00000493945 SYN2Q92777 582 aaPredicted RBP15.88■□□□□ 0.13
ACTB-213ENST00000493945 MRPL38Q96DV4 380 aaKnown RBP15.88■□□□□ 0.13
ACTB-213ENST00000493945 FUBP3Q96I24 572 aaKnown RBP eCLIP15.88■□□□□ 0.13
ACTB-213ENST00000493945 ARID3AQ99856 593 aa15.88■□□□□ 0.13
ACTB-213ENST00000493945 NAA15Q9BXJ9 866 aaKnown RBP15.88■□□□□ 0.13
ACTB-213ENST00000493945 PDCL3Q9H2J4 239 aa15.88■□□□□ 0.13
ACTB-213ENST00000493945 CERS4Q9HA82 394 aa15.88■□□□□ 0.13
ACTB-213ENST00000493945 NOL4O94818 638 aa15.87■□□□□ 0.13
ACTB-213ENST00000493945 VDRP11473 427 aa15.87■□□□□ 0.13
ACTB-213ENST00000493945 GNA15P30679 374 aa15.87■□□□□ 0.13
ACTB-213ENST00000493945 MRPL58Q14197 206 aaKnown RBP15.87■□□□□ 0.13
ACTB-213ENST00000493945 ZNF394Q53GI3 561 aa15.87■□□□□ 0.13
ACTB-213ENST00000493945 KIAA0319Q5VV43 1072 aa15.87■□□□□ 0.13
ACTB-213ENST00000493945 PPP1R2P3Q6NXS1 205 aa15.87■□□□□ 0.13
ACTB-213ENST00000493945 GJB7Q6PEY0 223 aa15.87■□□□□ 0.13
ACTB-213ENST00000493945 SPATA2LQ8IUW3 424 aaPredicted RBP15.87■□□□□ 0.13
ACTB-213ENST00000493945 FAM71AQ8IYT1 594 aa15.87■□□□□ 0.13
ACTB-213ENST00000493945 CRYBG2Q8N1P7 616 aa15.87■□□□□ 0.13
ACTB-213ENST00000493945 TMEM130Q8N3G9 435 aa15.87■□□□□ 0.13
ACTB-213ENST00000493945 MSANTD4Q8NCY6 345 aa15.87■□□□□ 0.13
ACTB-213ENST00000493945 LNX1Q8TBB1 728 aaPredicted RBP15.87■□□□□ 0.13
ACTB-213ENST00000493945 SPPL2BQ8TCT7 592 aa15.87■□□□□ 0.13
ACTB-213ENST00000493945 HEXIM2Q96MH2 286 aaKnown RBP15.87■□□□□ 0.13
ACTB-213ENST00000493945 KREMEN1Q96MU8 473 aa15.87■□□□□ 0.13
ACTB-213ENST00000493945 MED10Q9BTT4 135 aa15.87■□□□□ 0.13
ACTB-213ENST00000493945 ELOVL4Q9GZR5 314 aa15.87■□□□□ 0.13
ACTB-213ENST00000493945 RXFP1Q9HBX9 757 aa15.87■□□□□ 0.13
ACTB-213ENST00000493945 CNTN6Q9UQ52 1028 aa15.87■□□□□ 0.13
ACTB-213ENST00000493945 CDY1Q9Y6F8 540 aa15.87■□□□□ 0.13
ACTB-213ENST00000493945 MYH10P35580 1976 aa15.86■□□□□ 0.13
ACTB-213ENST00000493945 SPDYE4A6NLX3 237 aa15.86■□□□□ 0.13
ACTB-213ENST00000493945 FSCN2O14926 492 aa15.86■□□□□ 0.13
ACTB-213ENST00000493945 GRM6O15303 877 aa15.86■□□□□ 0.13
ACTB-213ENST00000493945 ARHGEF15O94989 841 aa15.86■□□□□ 0.13
ACTB-213ENST00000493945 GLUD1P00367 558 aa15.86■□□□□ 0.13
ACTB-213ENST00000493945 GYPCP04921 128 aa15.86■□□□□ 0.13
ACTB-213ENST00000493945 PDGFRBP09619 1106 aa15.86■□□□□ 0.13
ACTB-213ENST00000493945 PTPN1P18031 435 aaKnown RBP15.86■□□□□ 0.13
ACTB-213ENST00000493945 KLRC2P26717 231 aa15.86■□□□□ 0.13
ACTB-213ENST00000493945 CASP14P31944 242 aa15.86■□□□□ 0.13
ACTB-213ENST00000493945 KRT9P35527 623 aa15.86■□□□□ 0.13
ACTB-213ENST00000493945 ARPP19P56211 112 aa15.86■□□□□ 0.13
ACTB-213ENST00000493945 JAM2P57087 298 aa15.86■□□□□ 0.13
ACTB-213ENST00000493945 SNX16P57768 344 aa15.86■□□□□ 0.13
ACTB-213ENST00000493945 GPR17Q13304 367 aa15.86■□□□□ 0.13
ACTB-213ENST00000493945 PLD1Q13393 1074 aa15.86■□□□□ 0.13
ACTB-213ENST00000493945 MEA1Q16626 185 aa15.86■□□□□ 0.13
ACTB-213ENST00000493945 LIN9Q5TKA1 542 aa15.86■□□□□ 0.13
ACTB-213ENST00000493945 PRSS55Q6UWB4 352 aaPredicted RBP15.86■□□□□ 0.13
ACTB-213ENST00000493945 CCDC149Q6ZUS6 474 aa15.86■□□□□ 0.13
ACTB-213ENST00000493945 RTL10Q7L3V2 364 aa15.86■□□□□ 0.13
ACTB-213ENST00000493945 UBR7Q8N806 425 aa15.86■□□□□ 0.13
ACTB-213ENST00000493945 MRPL43Q8N983 215 aaKnown RBP15.86■□□□□ 0.13
ACTB-213ENST00000493945 OR8K1Q8NGG5 319 aa15.86■□□□□ 0.13
ACTB-213ENST00000493945 MYCBPAPQ8TBZ2 947 aa15.86■□□□□ 0.13
ACTB-213ENST00000493945 CPLX3Q8WVH0 158 aa15.86■□□□□ 0.13
ACTB-213ENST00000493945 NOX5Q96PH1 765 aa15.86■□□□□ 0.13
ACTB-213ENST00000493945 VN1R3Q9BXE9 311 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms