RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 DNAJB7Q7Z6W7 309 aaPredicted RBP13.58□□□□□ -0.24
HSPG2-212ENST00000493940 GIPC2Q8TF65 315 aa13.58□□□□□ -0.24
HSPG2-212ENST00000493940 ASB16Q96NS5 453 aa13.58□□□□□ -0.24
HSPG2-212ENST00000493940 FOXQ1Q9C009 403 aa13.58□□□□□ -0.24
HSPG2-212ENST00000493940 KCTD10Q9H3F6 313 aa13.58□□□□□ -0.24
HSPG2-212ENST00000493940 MFSD1Q9H3U5 465 aa13.58□□□□□ -0.24
HSPG2-212ENST00000493940 MAGEF1Q9HAY2 307 aa13.58□□□□□ -0.24
HSPG2-212ENST00000493940 IL21Q9HBE4 155 aa13.58□□□□□ -0.24
HSPG2-212ENST00000493940 DMAC2Q9NW81 257 aa13.58□□□□□ -0.24
HSPG2-212ENST00000493940 DLGAP2Q9P1A6 1054 aa13.58□□□□□ -0.24
HSPG2-212ENST00000493940 MAFFQ9ULX9 164 aa13.58□□□□□ -0.24
HSPG2-212ENST00000493940 HELZP42694 1942 aaKnown RBP13.58□□□□□ -0.24
HSPG2-212ENST00000493940 A0A1W2PRU2 124 aa13.57□□□□□ -0.24
HSPG2-212ENST00000493940 GABRDO14764 452 aa13.57□□□□□ -0.24
HSPG2-212ENST00000493940 DCNP07585 359 aaKnown RBP13.57□□□□□ -0.24
HSPG2-212ENST00000493940 KRT85P78386 507 aa13.57□□□□□ -0.24
HSPG2-212ENST00000493940 FOXK2Q01167 660 aa13.57□□□□□ -0.24
HSPG2-212ENST00000493940 CYP24A1Q07973 514 aa13.57□□□□□ -0.24
HSPG2-212ENST00000493940 GRM2Q14416 872 aa13.57□□□□□ -0.24
HSPG2-212ENST00000493940 SNRNP35Q16560 246 aaKnown RBP13.57□□□□□ -0.24
HSPG2-212ENST00000493940 KNOP1Q1ED39 458 aaKnown RBP13.57□□□□□ -0.24
HSPG2-212ENST00000493940 VITQ6UXI7 678 aa13.57□□□□□ -0.24
HSPG2-212ENST00000493940 PDZD4Q76G19 769 aaPredicted RBP13.57□□□□□ -0.24
HSPG2-212ENST00000493940 TRAPPC11Q7Z392 1133 aa13.57□□□□□ -0.24
HSPG2-212ENST00000493940 TMEM150AQ86TG1 271 aa13.57□□□□□ -0.24
HSPG2-212ENST00000493940 CACTINQ8WUQ7 758 aaKnown RBP13.57□□□□□ -0.24
HSPG2-212ENST00000493940 KBTBD7Q8WVZ9 684 aa13.57□□□□□ -0.24
HSPG2-212ENST00000493940 OXCT2Q9BYC2 517 aaPredicted RBP13.57□□□□□ -0.24
HSPG2-212ENST00000493940 TBC1D17Q9HA65 648 aa13.57□□□□□ -0.24
HSPG2-212ENST00000493940 GDAP2Q9NXN4 497 aa13.57□□□□□ -0.24
HSPG2-212ENST00000493940 GDE1Q9NZC3 331 aa13.57□□□□□ -0.24
HSPG2-212ENST00000493940 ITGA11Q9UKX5 1188 aa13.57□□□□□ -0.24
HSPG2-212ENST00000493940 SNX9Q9Y5X1 595 aa13.57□□□□□ -0.24
HSPG2-212ENST00000493940 RIF1Q5UIP0 2472 aaKnown RBP13.56□□□□□ -0.24
HSPG2-212ENST00000493940 MYBPHLA2RUH7 354 aa13.56□□□□□ -0.24
HSPG2-212ENST00000493940 ECI2O75521 394 aa13.56□□□□□ -0.24
HSPG2-212ENST00000493940 MICAL2O94851 1124 aa13.56□□□□□ -0.24
HSPG2-212ENST00000493940 TMEM191BP0C7N4 346 aa13.56□□□□□ -0.24
HSPG2-212ENST00000493940 HAPLN1P10915 354 aaPredicted RBP13.56□□□□□ -0.24
HSPG2-212ENST00000493940 HMGA1P17096 107 aaKnown RBP13.56□□□□□ -0.24
HSPG2-212ENST00000493940 PAX3P23760 479 aa13.56□□□□□ -0.24
HSPG2-212ENST00000493940 NBL1P41271 181 aa13.56□□□□□ -0.24
HSPG2-212ENST00000493940 SYKP43405 635 aa13.56□□□□□ -0.24
HSPG2-212ENST00000493940 STARD6P59095 220 aa13.56□□□□□ -0.24
HSPG2-212ENST00000493940 DLG4P78352 724 aa13.56□□□□□ -0.24
HSPG2-212ENST00000493940 RBP5P82980 135 aa13.56□□□□□ -0.24
HSPG2-212ENST00000493940 DPYDQ12882 1025 aa13.56□□□□□ -0.24
HSPG2-212ENST00000493940 PSMD6Q15008 389 aa13.56□□□□□ -0.24
HSPG2-212ENST00000493940 SLC44A4Q53GD3 710 aa13.56□□□□□ -0.24
HSPG2-212ENST00000493940 CYP4A22Q5TCH4 519 aa13.56□□□□□ -0.24
HSPG2-212ENST00000493940 MTSS1LQ765P7 747 aa13.56□□□□□ -0.24
HSPG2-212ENST00000493940 METTL23Q86XA0 190 aa13.56□□□□□ -0.24
HSPG2-212ENST00000493940 C12orf56Q8IXR9 622 aa13.56□□□□□ -0.24
HSPG2-212ENST00000493940 CEP57L1Q8IYX8 460 aa13.56□□□□□ -0.24
HSPG2-212ENST00000493940 LRRC52Q8N7C0 313 aa13.56□□□□□ -0.24
HSPG2-212ENST00000493940 XXYLT1Q8NBI6 393 aa13.56□□□□□ -0.24
HSPG2-212ENST00000493940 PSMG2Q969U7 264 aa13.56□□□□□ -0.24
HSPG2-212ENST00000493940 ELSPBP1Q96BH3 223 aa13.56□□□□□ -0.24
HSPG2-212ENST00000493940 CCDC127Q96BQ5 260 aa13.56□□□□□ -0.24
HSPG2-212ENST00000493940 ZNF560Q96MR9 790 aa13.56□□□□□ -0.24
HSPG2-212ENST00000493940 SEPT5Q99719 369 aaPredicted RBP13.56□□□□□ -0.24
HSPG2-212ENST00000493940 PI4K2AQ9BTU6 479 aa13.56□□□□□ -0.24
HSPG2-212ENST00000493940 ASAH2Q9NR71 780 aa13.56□□□□□ -0.24
HSPG2-212ENST00000493940 ARHGEF3Q9NR81 526 aa13.56□□□□□ -0.24
HSPG2-212ENST00000493940 DDX43Q9NXZ2 648 aaKnown RBP13.56□□□□□ -0.24
HSPG2-212ENST00000493940 ABI2Q9NYB9 513 aaPredicted RBP13.56□□□□□ -0.24
HSPG2-212ENST00000493940 GTF3C4Q9UKN8 822 aa13.56□□□□□ -0.24
HSPG2-212ENST00000493940 DSEQ9UL01 958 aa13.56□□□□□ -0.24
HSPG2-212ENST00000493940 FRYLO94915 3013 aa13.56□□□□□ -0.24
HSPG2-212ENST00000493940 UBE4BO95155 1302 aa13.56□□□□□ -0.24
HSPG2-212ENST00000493940 MYO16Q9Y6X6 1858 aa13.55□□□□□ -0.24
HSPG2-212ENST00000493940 ZNF197O14709 1029 aa13.55□□□□□ -0.24
HSPG2-212ENST00000493940 KIAA0391O15091 583 aaKnown RBP13.55□□□□□ -0.24
HSPG2-212ENST00000493940 RPN1P04843 607 aaKnown RBP13.55□□□□□ -0.24
HSPG2-212ENST00000493940 DLATP10515 647 aaKnown RBP13.55□□□□□ -0.24
HSPG2-212ENST00000493940 CYP2F1P24903 491 aa13.55□□□□□ -0.24
HSPG2-212ENST00000493940 ALDH1A3P47895 512 aa13.55□□□□□ -0.24
HSPG2-212ENST00000493940 EPHB3P54753 998 aa13.55□□□□□ -0.24
HSPG2-212ENST00000493940 CYP4F8P98187 520 aa13.55□□□□□ -0.24
HSPG2-212ENST00000493940 FZD5Q13467 585 aa13.55□□□□□ -0.24
HSPG2-212ENST00000493940 DUOXA2Q1HG44 320 aa13.55□□□□□ -0.24
HSPG2-212ENST00000493940 MGAT5BQ3V5L5 792 aa13.55□□□□□ -0.24
HSPG2-212ENST00000493940 C1orf220Q5T0J3 134 aa13.55□□□□□ -0.24
HSPG2-212ENST00000493940 IQCEQ6IPM2 695 aa13.55□□□□□ -0.24
HSPG2-212ENST00000493940 STXBP4Q6ZWJ1 553 aa13.55□□□□□ -0.24
HSPG2-212ENST00000493940 WDR49Q8IV35 697 aa13.55□□□□□ -0.24
HSPG2-212ENST00000493940 THEM5Q8N1Q8 247 aa13.55□□□□□ -0.24
HSPG2-212ENST00000493940 FSIP1Q8NA03 581 aa13.55□□□□□ -0.24
HSPG2-212ENST00000493940 ZSCAN18Q8TBC5 510 aaPredicted RBP13.55□□□□□ -0.24
HSPG2-212ENST00000493940 HPDLQ96IR7 371 aa13.55□□□□□ -0.24
HSPG2-212ENST00000493940 ANKRD36BP1Q96IX9 119 aa13.55□□□□□ -0.24
HSPG2-212ENST00000493940 CGRRF1Q99675 332 aa13.55□□□□□ -0.24
HSPG2-212ENST00000493940 DDX23Q9BUQ8 820 aaKnown RBP13.55□□□□□ -0.24
HSPG2-212ENST00000493940 CRTAC1Q9NQ79 661 aa13.55□□□□□ -0.24
HSPG2-212ENST00000493940 HEBP1Q9NRV9 189 aa13.55□□□□□ -0.24
HSPG2-212ENST00000493940 LRRIQ3A6PVS8 624 aaPredicted RBP13.54□□□□□ -0.24
HSPG2-212ENST00000493940 STK25O00506 426 aa13.54□□□□□ -0.24
HSPG2-212ENST00000493940 HUS1O60921 280 aa13.54□□□□□ -0.24
HSPG2-212ENST00000493940 ZNF202O95125 648 aa13.54□□□□□ -0.24
HSPG2-212ENST00000493940 VNN1O95497 513 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms