RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 AFMIDQ63HM1 303 aa5.09□□□□□ -1.59
GTF3A-208ENST00000493903 ITPRIPL1Q6GPH6 555 aa5.09□□□□□ -1.59
GTF3A-208ENST00000493903 SPOCD1Q6ZMY3 1216 aa5.09□□□□□ -1.59
GTF3A-208ENST00000493903 PRR23BQ6ZRT6 265 aa5.09□□□□□ -1.59
GTF3A-208ENST00000493903 ZNF365Q70YC5 407 aa5.09□□□□□ -1.59
GTF3A-208ENST00000493903 HEATR4Q86WZ0 1026 aa5.09□□□□□ -1.59
GTF3A-208ENST00000493903 RTKN2Q8IZC4 609 aa5.09□□□□□ -1.59
GTF3A-208ENST00000493903 OR8H2Q8N162 312 aa5.09□□□□□ -1.59
GTF3A-208ENST00000493903 PCSK9Q8NBP7 692 aaKnown RBP5.09□□□□□ -1.59
GTF3A-208ENST00000493903 OR6Y1Q8NGX8 325 aa5.09□□□□□ -1.59
GTF3A-208ENST00000493903 NUP133Q8WUM0 1156 aa5.09□□□□□ -1.59
GTF3A-208ENST00000493903 GCDHQ92947 438 aaPredicted RBP5.09□□□□□ -1.59
GTF3A-208ENST00000493903 SCAMP4Q969E2 229 aa5.09□□□□□ -1.59
GTF3A-208ENST00000493903 SLC7A6OSQ96CW6 309 aaPredicted RBP5.09□□□□□ -1.59
GTF3A-208ENST00000493903 C7orf26Q96N11 449 aa5.09□□□□□ -1.59
GTF3A-208ENST00000493903 KCNC2Q96PR1 638 aa5.09□□□□□ -1.59
GTF3A-208ENST00000493903 RTKNQ9BST9 563 aa5.09□□□□□ -1.59
GTF3A-208ENST00000493903 TWSG1Q9GZX9 223 aa5.09□□□□□ -1.59
GTF3A-208ENST00000493903 PABPC3Q9H361 631 aaKnown RBP5.09□□□□□ -1.59
GTF3A-208ENST00000493903 MLXIPQ9HAP2 919 aa5.09□□□□□ -1.59
GTF3A-208ENST00000493903 XPNPEP3Q9NQH7 507 aa5.09□□□□□ -1.59
GTF3A-208ENST00000493903 PRDM8Q9NQV8 689 aa5.09□□□□□ -1.59
GTF3A-208ENST00000493903 HELLSQ9NRZ9 838 aa5.09□□□□□ -1.59
GTF3A-208ENST00000493903 OLA1Q9NTK5 396 aaKnown RBP5.09□□□□□ -1.59
GTF3A-208ENST00000493903 TMEM160Q9NX00 188 aa5.09□□□□□ -1.59
GTF3A-208ENST00000493903 CROTQ9UKG9 612 aa5.09□□□□□ -1.59
GTF3A-208ENST00000493903 RUVBL1Q9Y265 456 aaKnown RBP5.09□□□□□ -1.59
GTF3A-208ENST00000493903 CTDP1Q9Y5B0 961 aaPredicted RBP5.09□□□□□ -1.59
GTF3A-208ENST00000493903 CC2D2AQ9P2K1 1620 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 LOC102723971A0A1B0GUV8 181 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 C2orf78A6NCI8 922 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 HMX3A6NHT5 357 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 TMEM233B4DJY2 109 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 TMCC2O75069 709 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 TK1P04183 234 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 SBK3P0C264 359 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 VSIG10L2P0DP72 767 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 RAP2AP10114 183 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 TXKP42681 527 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 PHKA1P46020 1223 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 AARSP49588 968 aaKnown RBP eCLIP5.08□□□□□ -1.6
GTF3A-208ENST00000493903 KCNQ1P51787 676 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 PNLIPRP1P54315 467 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 NR1H2P55055 460 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 NSUN2Q08J23 767 aaKnown RBP eCLIP5.08□□□□□ -1.6
GTF3A-208ENST00000493903 RTP5Q14D33 572 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 GAGE13Q4V321 117 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.08□□□□□ -1.6
GTF3A-208ENST00000493903 WDR45BQ5MNZ6 344 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 GPATCH4Q5T3I0 446 aaKnown RBP5.08□□□□□ -1.6
GTF3A-208ENST00000493903 AGAP9Q5VTM2 703 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 TSHZ3Q63HK5 1081 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 MRNIPQ6NTE8 343 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 PDXDC1Q6P996 788 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 BBS12Q6ZW61 710 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 USP49Q70CQ1 688 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 FRMD5Q7Z6J6 570 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 SLC44A2Q8IWA5 706 aaPredicted RBP5.08□□□□□ -1.6
GTF3A-208ENST00000493903 LINC00482Q8N8I6 264 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 KYQ8NBH2 561 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 FBXO18Q8NFZ0 1043 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 SMARCC2Q8TAQ2 1214 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 MDM1Q8TC05 714 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 SMCR8Q8TEV9 937 aaPredicted RBP5.08□□□□□ -1.6
GTF3A-208ENST00000493903 RILPL2Q969X0 211 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 RSRC1Q96IZ7 334 aaKnown RBP5.08□□□□□ -1.6
GTF3A-208ENST00000493903 DIRC2Q96SL1 478 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 GORASP1Q9BQQ3 440 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 C11orf84Q9BUA3 381 aaPredicted RBP5.08□□□□□ -1.6
GTF3A-208ENST00000493903 SPATA5L1Q9BVQ7 753 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 CPEB1Q9BZB8 566 aaKnown RBP5.08□□□□□ -1.6
GTF3A-208ENST00000493903 PCDHAC1Q9H158 963 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 FAM83DQ9H4H8 585 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 PREBQ9HCU5 417 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 NSMCE4AQ9NXX6 385 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 FAM30AQ9NZY2 134 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 PI4KBQ9UBF8 816 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 ZMYND8Q9ULU4 1186 aaPredicted RBP5.08□□□□□ -1.6
GTF3A-208ENST00000493903 PLA2G2DQ9UNK4 145 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 JAG2Q9Y219 1238 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 DTNAQ9Y4J8 743 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 HS3ST4Q9Y661 456 aa5.08□□□□□ -1.6
GTF3A-208ENST00000493903 CECR2Q9BXF3 1484 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 FCHO1O14526 889 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 PJA2O43164 708 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 NTSR2O95665 410 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 PRKCBP05771 671 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 PIM1P11309 404 aaPredicted RBP5.07□□□□□ -1.6
GTF3A-208ENST00000493903 CKBP12277 381 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 ALAS1P13196 640 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 ATP1A3P13637 1013 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 PFKLP17858 780 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 ATP5JP18859 108 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 SLC5A2P31639 672 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 VIPR1P32241 457 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 VIPR2P41587 438 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 CPT1AP50416 773 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 DCAF7P61962 342 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 CHRNDQ07001 517 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 TCF15Q12870 199 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms