RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 PRSS55Q6UWB4 352 aaPredicted RBP20.64■□□□□ 0.9
USP39-218ENST00000493829 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.64■□□□□ 0.9
USP39-218ENST00000493829 LRRC8AQ8IWT6 810 aa20.64■□□□□ 0.9
USP39-218ENST00000493829 EPS8L1Q8TE68 723 aa20.64■□□□□ 0.9
USP39-218ENST00000493829 SYN2Q92777 582 aaPredicted RBP20.64■□□□□ 0.9
USP39-218ENST00000493829 HEXIM2Q96MH2 286 aaKnown RBP20.64■□□□□ 0.9
USP39-218ENST00000493829 TMEM209Q96SK2 561 aa20.64■□□□□ 0.9
USP39-218ENST00000493829 CHP1Q99653 195 aa20.64■□□□□ 0.9
USP39-218ENST00000493829 RTP3Q9BQQ7 232 aa20.64■□□□□ 0.9
USP39-218ENST00000493829 TTPALQ9BTX7 342 aa20.64■□□□□ 0.9
USP39-218ENST00000493829 CERS4Q9HA82 394 aa20.64■□□□□ 0.9
USP39-218ENST00000493829 SEPT11Q9NVA2 429 aaKnown RBP20.64■□□□□ 0.9
USP39-218ENST00000493829 GABRDO14764 452 aa20.64■□□□□ 0.89
USP39-218ENST00000493829 CA8P35219 290 aa20.64■□□□□ 0.89
USP39-218ENST00000493829 DEKP35659 375 aaKnown RBP20.64■□□□□ 0.89
USP39-218ENST00000493829 LHX1P48742 406 aa20.64■□□□□ 0.89
USP39-218ENST00000493829 PTK2Q05397 1052 aa20.64■□□□□ 0.89
USP39-218ENST00000493829 MEA1Q16626 185 aa20.64■□□□□ 0.89
USP39-218ENST00000493829 KIAA0319Q5VV43 1072 aa20.64■□□□□ 0.89
USP39-218ENST00000493829 HGSNATQ68CP4 663 aa20.64■□□□□ 0.89
USP39-218ENST00000493829 KIAA1841Q6NSI8 718 aa20.64■□□□□ 0.89
USP39-218ENST00000493829 TTC39CQ8N584 583 aa20.64■□□□□ 0.89
USP39-218ENST00000493829 C12orf29Q8N999 325 aa20.64■□□□□ 0.89
USP39-218ENST00000493829 OR10T2Q8NGX3 314 aa20.64■□□□□ 0.89
USP39-218ENST00000493829 BAG1Q99933 345 aaPredicted RBP20.64■□□□□ 0.89
USP39-218ENST00000493829 SYT15Q9BQS2 421 aa20.64■□□□□ 0.89
USP39-218ENST00000493829 ALG13Q9NP73 1137 aaKnown RBP20.64■□□□□ 0.89
USP39-218ENST00000493829 ARHGAP20Q9P2F6 1191 aa20.64■□□□□ 0.89
USP39-218ENST00000493829 SOWAHDA6NJG2 315 aa20.63■□□□□ 0.89
USP39-218ENST00000493829 SERPING1P05155 500 aa20.63■□□□□ 0.89
USP39-218ENST00000493829 OR4Q2P0C623 313 aa20.63■□□□□ 0.89
USP39-218ENST00000493829 HNRNPH3P31942 346 aaKnown RBP20.63■□□□□ 0.89
USP39-218ENST00000493829 BMPR1AP36894 532 aa20.63■□□□□ 0.89
USP39-218ENST00000493829 CTXN3Q4LDR2 81 aa20.63■□□□□ 0.89
USP39-218ENST00000493829 UNC93AQ86WB7 457 aa20.63■□□□□ 0.89
USP39-218ENST00000493829 VPS52Q8N1B4 723 aa20.63■□□□□ 0.89
USP39-218ENST00000493829 THEM5Q8N1Q8 247 aa20.63■□□□□ 0.89
USP39-218ENST00000493829 AUTS2Q8WXX7 1259 aa20.63■□□□□ 0.89
USP39-218ENST00000493829 RIN2Q8WYP3 895 aaPredicted RBP20.63■□□□□ 0.89
USP39-218ENST00000493829 TFAP2BQ92481 460 aa20.63■□□□□ 0.89
USP39-218ENST00000493829 HERC2P3Q9BVR0 1158 aa20.63■□□□□ 0.89
USP39-218ENST00000493829 MSRAQ9UJ68 235 aa20.63■□□□□ 0.89
USP39-218ENST00000493829 NOCTQ9UK39 431 aaKnown RBP20.63■□□□□ 0.89
USP39-218ENST00000493829 EFEMP2O95967 443 aa20.62■□□□□ 0.89
USP39-218ENST00000493829 SOD2P04179 222 aa20.62■□□□□ 0.89
USP39-218ENST00000493829 CCDC172P0C7W6 258 aa20.62■□□□□ 0.89
USP39-218ENST00000493829 CCDC130P13994 396 aa20.62■□□□□ 0.89
USP39-218ENST00000493829 EIF4A3P38919 411 aaKnown RBP20.62■□□□□ 0.89
USP39-218ENST00000493829 TAP1Q03518 808 aa20.62■□□□□ 0.89
USP39-218ENST00000493829 KRT17Q04695 432 aa20.62■□□□□ 0.89
USP39-218ENST00000493829 USP41Q3LFD5 358 aa20.62■□□□□ 0.89
USP39-218ENST00000493829 MDH1BQ5I0G3 518 aa20.62■□□□□ 0.89
USP39-218ENST00000493829 PPP2R2DQ66LE6 453 aa20.62■□□□□ 0.89
USP39-218ENST00000493829 ZNF571Q7Z3V5 609 aaPredicted RBP20.62■□□□□ 0.89
USP39-218ENST00000493829 DDX53Q86TM3 631 aaKnown RBP20.62■□□□□ 0.89
USP39-218ENST00000493829 TMEM139Q8IV31 216 aa20.62■□□□□ 0.89
USP39-218ENST00000493829 FMNL3Q8IVF7 1028 aa20.62■□□□□ 0.89
USP39-218ENST00000493829 RNF168Q8IYW5 571 aaPredicted RBP20.62■□□□□ 0.89
USP39-218ENST00000493829 B3GALNT2Q8NCR0 500 aa20.62■□□□□ 0.89
USP39-218ENST00000493829 ZSWIM1Q9BR11 485 aa20.62■□□□□ 0.89
USP39-218ENST00000493829 KCNF1Q9H3M0 494 aa20.62■□□□□ 0.89
USP39-218ENST00000493829 CARNS1A5YM72 827 aa20.61■□□□□ 0.89
USP39-218ENST00000493829 MMEP08473 750 aa20.61■□□□□ 0.89
USP39-218ENST00000493829 CFHP08603 1231 aa20.61■□□□□ 0.89
USP39-218ENST00000493829 PAEPP09466 180 aa20.61■□□□□ 0.89
USP39-218ENST00000493829 RPL17P18621 184 aaKnown RBP20.61■□□□□ 0.89
USP39-218ENST00000493829 GLUD2P49448 558 aa20.61■□□□□ 0.89
USP39-218ENST00000493829 ARPP19P56211 112 aa20.61■□□□□ 0.89
USP39-218ENST00000493829 MTF1Q14872 753 aa20.61■□□□□ 0.89
USP39-218ENST00000493829 RAB30Q15771 203 aa20.61■□□□□ 0.89
USP39-218ENST00000493829 ZNF280DQ6N043 979 aa20.61■□□□□ 0.89
USP39-218ENST00000493829 PASD1Q8IV76 773 aa20.61■□□□□ 0.89
USP39-218ENST00000493829 GLYCTKQ8IVS8 523 aa20.61■□□□□ 0.89
USP39-218ENST00000493829 TNIP3Q96KP6 325 aa20.61■□□□□ 0.89
USP39-218ENST00000493829 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.61■□□□□ 0.89
USP39-218ENST00000493829 DEF6Q9H4E7 631 aa20.61■□□□□ 0.89
USP39-218ENST00000493829 CRTAC1Q9NQ79 661 aa20.61■□□□□ 0.89
USP39-218ENST00000493829 RWDD3Q9Y3V2 267 aa20.61■□□□□ 0.89
USP39-218ENST00000493829 URODP06132 367 aa20.61■□□□□ 0.89
USP39-218ENST00000493829 PCSK1P29120 753 aa20.61■□□□□ 0.89
USP39-218ENST00000493829 PRKCIP41743 596 aa20.61■□□□□ 0.89
USP39-218ENST00000493829 BPIFB4P59827 614 aa20.61■□□□□ 0.89
USP39-218ENST00000493829 CCZ1BP86790 482 aa20.61■□□□□ 0.89
USP39-218ENST00000493829 CCZ1P86791 482 aaPredicted RBP20.61■□□□□ 0.89
USP39-218ENST00000493829 SGO2Q562F6 1265 aa20.61■□□□□ 0.89
USP39-218ENST00000493829 CYP26C1Q6V0L0 522 aa20.61■□□□□ 0.89
USP39-218ENST00000493829 TGS1Q96RS0 853 aaKnown RBP20.61■□□□□ 0.89
USP39-218ENST00000493829 FAM124BQ9H5Z6 455 aaPredicted RBP20.61■□□□□ 0.89
USP39-218ENST00000493829 NHEJ1Q9H9Q4 299 aaPredicted RBP20.61■□□□□ 0.89
USP39-218ENST00000493829 OAZ2O95190 189 aa20.6■□□□□ 0.89
USP39-218ENST00000493829 PTPN1P18031 435 aaKnown RBP20.6■□□□□ 0.89
USP39-218ENST00000493829 ADORA2BP29275 332 aa20.6■□□□□ 0.89
USP39-218ENST00000493829 TSPY1Q01534 308 aa20.6■□□□□ 0.89
USP39-218ENST00000493829 PSMD5Q16401 504 aa20.6■□□□□ 0.89
USP39-218ENST00000493829 INTS6LQ5JSJ4 861 aaKnown RBP20.6■□□□□ 0.89
USP39-218ENST00000493829 AGPAT1Q99943 283 aa20.6■□□□□ 0.89
USP39-218ENST00000493829 PDCL3Q9H2J4 239 aa20.6■□□□□ 0.89
USP39-218ENST00000493829 PRO3102Q9H379 93 aa20.6■□□□□ 0.89
USP39-218ENST00000493829 GTF3C4Q9UKN8 822 aa20.6■□□□□ 0.89
USP39-218ENST00000493829 CDH9Q9ULB4 789 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms