RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 MKNK1Q9BUB5 465 aa17.92■□□□□ 0.46
PTPRU-208ENST00000493601 EPC1Q9H2F5 836 aa17.92■□□□□ 0.46
PTPRU-208ENST00000493601 ZSCAN16Q9H4T2 348 aaPredicted RBP17.92■□□□□ 0.46
PTPRU-208ENST00000493601 TASP1Q9H6P5 420 aa17.92■□□□□ 0.46
PTPRU-208ENST00000493601 C8orf33Q9H7E9 229 aaPredicted RBP17.92■□□□□ 0.46
PTPRU-208ENST00000493601 ABI2Q9NYB9 513 aaPredicted RBP17.92■□□□□ 0.46
PTPRU-208ENST00000493601 RBAKQ9NYW8 714 aaPredicted RBP17.92■□□□□ 0.46
PTPRU-208ENST00000493601 NCDNQ9UBB6 729 aa17.92■□□□□ 0.46
PTPRU-208ENST00000493601 ZMYM5Q9UJ78 669 aa17.92■□□□□ 0.46
PTPRU-208ENST00000493601 KIF26AQ9ULI4 1882 aaPredicted RBP17.92■□□□□ 0.46
PTPRU-208ENST00000493601 DENND4CQ5VZ89 1909 aa17.92■□□□□ 0.46
PTPRU-208ENST00000493601 CACNA1AO00555 2505 aa17.92■□□□□ 0.46
PTPRU-208ENST00000493601 OBSL1O75147 1896 aa17.91■□□□□ 0.46
PTPRU-208ENST00000493601 SLC38A8A6NNN8 435 aa17.91■□□□□ 0.46
PTPRU-208ENST00000493601 TULP1O00294 542 aaPredicted RBP17.91■□□□□ 0.46
PTPRU-208ENST00000493601 LILRB5O75023 590 aa17.91■□□□□ 0.46
PTPRU-208ENST00000493601 WEE1P30291 646 aa17.91■□□□□ 0.46
PTPRU-208ENST00000493601 POLR2BP30876 1174 aaKnown RBP17.91■□□□□ 0.46
PTPRU-208ENST00000493601 CCR3P51677 355 aa17.91■□□□□ 0.46
PTPRU-208ENST00000493601 CASP5P51878 434 aa17.91■□□□□ 0.46
PTPRU-208ENST00000493601 NRLP54845 237 aa17.91■□□□□ 0.46
PTPRU-208ENST00000493601 TSPY1Q01534 308 aa17.91■□□□□ 0.46
PTPRU-208ENST00000493601 LRRC32Q14392 662 aa17.91■□□□□ 0.46
PTPRU-208ENST00000493601 ARHGAP29Q52LW3 1261 aa17.91■□□□□ 0.46
PTPRU-208ENST00000493601 CACTINQ8WUQ7 758 aaKnown RBP17.91■□□□□ 0.46
PTPRU-208ENST00000493601 USP28Q96RU2 1077 aa17.91■□□□□ 0.46
PTPRU-208ENST00000493601 LMAN1LQ9HAT1 526 aa17.91■□□□□ 0.46
PTPRU-208ENST00000493601 PANK4Q9NVE7 773 aa17.91■□□□□ 0.46
PTPRU-208ENST00000493601 SMG5Q9UPR3 1016 aaKnown RBP17.91■□□□□ 0.46
PTPRU-208ENST00000493601 MTMR6Q9Y217 621 aa17.91■□□□□ 0.46
PTPRU-208ENST00000493601 PCDHB5Q9Y5E4 795 aa17.91■□□□□ 0.46
PTPRU-208ENST00000493601 ITGB3P05106 788 aa17.9■□□□□ 0.46
PTPRU-208ENST00000493601 HAPLN1P10915 354 aaPredicted RBP17.9■□□□□ 0.46
PTPRU-208ENST00000493601 CYP4F8P98187 520 aa17.9■□□□□ 0.46
PTPRU-208ENST00000493601 PLCB2Q00722 1185 aa17.9■□□□□ 0.46
PTPRU-208ENST00000493601 STXBP4Q6ZWJ1 553 aa17.9■□□□□ 0.46
PTPRU-208ENST00000493601 LRRTM3Q86VH5 581 aa17.9■□□□□ 0.46
PTPRU-208ENST00000493601 LRRC52Q8N7C0 313 aa17.9■□□□□ 0.46
PTPRU-208ENST00000493601 TMEM206Q9H813 350 aa17.9■□□□□ 0.46
PTPRU-208ENST00000493601 IL21Q9HBE4 155 aa17.9■□□□□ 0.46
PTPRU-208ENST00000493601 ITGA11Q9UKX5 1188 aa17.9■□□□□ 0.46
PTPRU-208ENST00000493601 A0A087X0B3 334 aa17.89■□□□□ 0.45
PTPRU-208ENST00000493601 SPECC1L-ADORA2AF8WAN1 911 aa17.89■□□□□ 0.45
PTPRU-208ENST00000493601 STX6O43752 255 aa17.89■□□□□ 0.45
PTPRU-208ENST00000493601 EXTL3O43909 919 aa17.89■□□□□ 0.45
PTPRU-208ENST00000493601 PRAMEF12O95522 483 aa17.89■□□□□ 0.45
PTPRU-208ENST00000493601 CHRNB1P11230 501 aa17.89■□□□□ 0.45
PTPRU-208ENST00000493601 TDGF1P13385 188 aa17.89■□□□□ 0.45
PTPRU-208ENST00000493601 CTHP32929 405 aa17.89■□□□□ 0.45
PTPRU-208ENST00000493601 NASPP49321 788 aaPredicted RBP17.89■□□□□ 0.45
PTPRU-208ENST00000493601 CDR1P51861 262 aa17.89■□□□□ 0.45
PTPRU-208ENST00000493601 WNT7BP56706 349 aa17.89■□□□□ 0.45
PTPRU-208ENST00000493601 NFE2Q16621 373 aaPredicted RBP17.89■□□□□ 0.45
PTPRU-208ENST00000493601 RALGPS2Q86X27 583 aaPredicted RBP17.89■□□□□ 0.45
PTPRU-208ENST00000493601 CCDC65Q8IXS2 484 aa17.89■□□□□ 0.45
PTPRU-208ENST00000493601 TMEM86AQ8N2M4 240 aa17.89■□□□□ 0.45
PTPRU-208ENST00000493601 PDCL2Q8N4E4 241 aa17.89■□□□□ 0.45
PTPRU-208ENST00000493601 DCLK2Q8N568 766 aa17.89■□□□□ 0.45
PTPRU-208ENST00000493601 C1orf127Q8N9H9 656 aa17.89■□□□□ 0.45
PTPRU-208ENST00000493601 ZSWIM2Q8NEG5 633 aa17.89■□□□□ 0.45
PTPRU-208ENST00000493601 BPIFB1Q8TDL5 484 aa17.89■□□□□ 0.45
PTPRU-208ENST00000493601 GIPC2Q8TF65 315 aa17.89■□□□□ 0.45
PTPRU-208ENST00000493601 NOC3LQ8WTT2 800 aaKnown RBP17.89■□□□□ 0.45
PTPRU-208ENST00000493601 LEO1Q8WVC0 666 aaPredicted RBP17.89■□□□□ 0.45
PTPRU-208ENST00000493601 RMDN1Q96DB5 314 aa17.89■□□□□ 0.45
PTPRU-208ENST00000493601 PANK2Q9BZ23 570 aa17.89■□□□□ 0.45
PTPRU-208ENST00000493601 AGAP1Q9UPQ3 857 aa17.89■□□□□ 0.45
PTPRU-208ENST00000493601 GPR179Q6PRD1 2367 aa17.89■□□□□ 0.45
PTPRU-208ENST00000493601 ZNF638Q14966 1978 aaKnown RBP17.88■□□□□ 0.45
PTPRU-208ENST00000493601 MYBPHLA2RUH7 354 aa17.88■□□□□ 0.45
PTPRU-208ENST00000493601 K7ELQ4 463 aaPredicted RBP17.88■□□□□ 0.45
PTPRU-208ENST00000493601 KIAA0391O15091 583 aaKnown RBP17.88■□□□□ 0.45
PTPRU-208ENST00000493601 HUS1O60921 280 aa17.88■□□□□ 0.45
PTPRU-208ENST00000493601 DDX6P26196 483 aaKnown RBP eCLIP17.88■□□□□ 0.45
PTPRU-208ENST00000493601 SOX9P48436 509 aa17.88■□□□□ 0.45
PTPRU-208ENST00000493601 BFSP1Q12934 665 aa17.88■□□□□ 0.45
PTPRU-208ENST00000493601 STK38Q15208 465 aa17.88■□□□□ 0.45
PTPRU-208ENST00000493601 GPIHBP1Q8IV16 184 aa17.88■□□□□ 0.45
PTPRU-208ENST00000493601 CSGALNACT2Q8N6G5 542 aa17.88■□□□□ 0.45
PTPRU-208ENST00000493601 GPR161Q8N6U8 529 aaKnown RBP17.88■□□□□ 0.45
PTPRU-208ENST00000493601 PDILTQ8N807 584 aa17.88■□□□□ 0.45
PTPRU-208ENST00000493601 SPATA18Q8TC71 538 aa17.88■□□□□ 0.45
PTPRU-208ENST00000493601 ZFYVE19Q96K21 471 aa17.88■□□□□ 0.45
PTPRU-208ENST00000493601 LRRC3BQ96PB8 259 aa17.88■□□□□ 0.45
PTPRU-208ENST00000493601 ACBD6Q9BR61 282 aa17.88■□□□□ 0.45
PTPRU-208ENST00000493601 CBWD1Q9BRT8 395 aa17.88■□□□□ 0.45
PTPRU-208ENST00000493601 FGFBP2Q9BYJ0 223 aa17.88■□□□□ 0.45
PTPRU-208ENST00000493601 LRRC27Q9C0I9 530 aa17.88■□□□□ 0.45
PTPRU-208ENST00000493601 TNMDQ9H2S6 317 aa17.88■□□□□ 0.45
PTPRU-208ENST00000493601 ABCB6Q9NP58 842 aa17.88■□□□□ 0.45
PTPRU-208ENST00000493601 THG1LQ9NWX6 298 aaKnown RBP17.88■□□□□ 0.45
PTPRU-208ENST00000493601 L1RE1Q9UN81 338 aa17.88■□□□□ 0.45
PTPRU-208ENST00000493601 DNAH14Q0VDD8 3507 aa17.87■□□□□ 0.45
PTPRU-208ENST00000493601 GOLGA8IPA6NC78 632 aa17.87■□□□□ 0.45
PTPRU-208ENST00000493601 GOLGA8JA6NMD2 632 aa17.87■□□□□ 0.45
PTPRU-208ENST00000493601 KRT19P08727 400 aa17.87■□□□□ 0.45
PTPRU-208ENST00000493601 TMEM191BP0C7N4 346 aa17.87■□□□□ 0.45
PTPRU-208ENST00000493601 AVPR1AP37288 418 aa17.87■□□□□ 0.45
PTPRU-208ENST00000493601 CXCL12P48061 93 aa17.87■□□□□ 0.45
PTPRU-208ENST00000493601 NLRP12P59046 1061 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms