RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 PAK2Q13177 524 aa14.89□□□□□ -0.03
PTPN7-216ENST00000492977 LLGL2Q6P1M3 1020 aa14.89□□□□□ -0.03
PTPN7-216ENST00000492977 DENND1BQ6P3S1 775 aa14.89□□□□□ -0.03
PTPN7-216ENST00000492977 DNAJC24Q6P3W2 148 aa14.89□□□□□ -0.03
PTPN7-216ENST00000492977 EMBQ6PCB8 327 aa14.89□□□□□ -0.03
PTPN7-216ENST00000492977 CPNE8Q86YQ8 564 aa14.89□□□□□ -0.03
PTPN7-216ENST00000492977 KLHDC9Q8NEP7 349 aa14.89□□□□□ -0.03
PTPN7-216ENST00000492977 CAPNS2Q96L46 248 aa14.89□□□□□ -0.03
PTPN7-216ENST00000492977 HEXIM2Q96MH2 286 aaKnown RBP14.89□□□□□ -0.03
PTPN7-216ENST00000492977 UBXN6Q9BZV1 441 aa14.89□□□□□ -0.03
PTPN7-216ENST00000492977 DDX47Q9H0S4 455 aaKnown RBP14.89□□□□□ -0.03
PTPN7-216ENST00000492977 ACBD3Q9H3P7 528 aa14.89□□□□□ -0.03
PTPN7-216ENST00000492977 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.89□□□□□ -0.03
PTPN7-216ENST00000492977 PDCD11Q14690 1871 aaKnown RBP14.88□□□□□ -0.03
PTPN7-216ENST00000492977 SMIM28A0A1B0GU29 152 aa14.88□□□□□ -0.03
PTPN7-216ENST00000492977 PSTPIP1O43586 416 aa14.88□□□□□ -0.03
PTPN7-216ENST00000492977 AKAP5P24588 427 aa14.88□□□□□ -0.03
PTPN7-216ENST00000492977 HOXD10P28358 340 aa14.88□□□□□ -0.03
PTPN7-216ENST00000492977 NDST1P52848 882 aa14.88□□□□□ -0.03
PTPN7-216ENST00000492977 GSCP56915 257 aaPredicted RBP14.88□□□□□ -0.03
PTPN7-216ENST00000492977 CBX1P83916 185 aa14.88□□□□□ -0.03
PTPN7-216ENST00000492977 GPS2Q13227 327 aa14.88□□□□□ -0.03
PTPN7-216ENST00000492977 STILQ15468 1287 aa14.88□□□□□ -0.03
PTPN7-216ENST00000492977 SGO2Q562F6 1265 aa14.88□□□□□ -0.03
PTPN7-216ENST00000492977 C9orf57Q5W0N0 161 aa14.88□□□□□ -0.03
PTPN7-216ENST00000492977 GDF6Q6KF10 455 aaPredicted RBP14.88□□□□□ -0.03
PTPN7-216ENST00000492977 SERINC5Q86VE9 423 aa14.88□□□□□ -0.03
PTPN7-216ENST00000492977 FAM228AQ86W67 206 aa14.88□□□□□ -0.03
PTPN7-216ENST00000492977 SLC13A5Q86YT5 568 aaPredicted RBP14.88□□□□□ -0.03
PTPN7-216ENST00000492977 C3orf20Q8ND61 904 aa14.88□□□□□ -0.03
PTPN7-216ENST00000492977 TWNKQ96RR1 684 aa14.88□□□□□ -0.03
PTPN7-216ENST00000492977 HINFPQ9BQA5 517 aa14.88□□□□□ -0.03
PTPN7-216ENST00000492977 APOL6Q9BWW8 343 aa14.88□□□□□ -0.03
PTPN7-216ENST00000492977 NT5C1AQ9BXI3 368 aa14.88□□□□□ -0.03
PTPN7-216ENST00000492977 CXCL16Q9H2A7 254 aa14.88□□□□□ -0.03
PTPN7-216ENST00000492977 RNF186Q9NXI6 227 aa14.88□□□□□ -0.03
PTPN7-216ENST00000492977 WDR35Q9P2L0 1181 aa14.88□□□□□ -0.03
PTPN7-216ENST00000492977 PARP2Q9UGN5 583 aa14.88□□□□□ -0.03
PTPN7-216ENST00000492977 MTUS1Q9ULD2 1270 aa14.88□□□□□ -0.03
PTPN7-216ENST00000492977 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.88□□□□□ -0.03
PTPN7-216ENST00000492977 IPPQ9Y573 584 aa14.88□□□□□ -0.03
PTPN7-216ENST00000492977 CDY2AQ9Y6F7 541 aa14.88□□□□□ -0.03
PTPN7-216ENST00000492977 O00370 1275 aa14.87□□□□□ -0.03
PTPN7-216ENST00000492977 CYP3A5P20815 502 aa14.87□□□□□ -0.03
PTPN7-216ENST00000492977 CHRNA3P32297 505 aa14.87□□□□□ -0.03
PTPN7-216ENST00000492977 PNPLA4P41247 253 aa14.87□□□□□ -0.03
PTPN7-216ENST00000492977 TNNT3P45378 269 aaPredicted RBP14.87□□□□□ -0.03
PTPN7-216ENST00000492977 NNTQ13423 1086 aa14.87□□□□□ -0.03
PTPN7-216ENST00000492977 CUL1Q13616 776 aa14.87□□□□□ -0.03
PTPN7-216ENST00000492977 KCNA10Q16322 511 aa14.87□□□□□ -0.03
PTPN7-216ENST00000492977 PPP1R15BQ5SWA1 713 aa14.87□□□□□ -0.03
PTPN7-216ENST00000492977 TWF2Q6IBS0 349 aaKnown RBP14.87□□□□□ -0.03
PTPN7-216ENST00000492977 RHOT1Q8IXI2 618 aa14.87□□□□□ -0.03
PTPN7-216ENST00000492977 PCSK9Q8NBP7 692 aaKnown RBP14.87□□□□□ -0.03
PTPN7-216ENST00000492977 MAIP1Q8WWC4 291 aa14.87□□□□□ -0.03
PTPN7-216ENST00000492977 CAVIN3Q969G5 261 aa14.87□□□□□ -0.03
PTPN7-216ENST00000492977 C18orf25Q96B23 403 aaPredicted RBP14.87□□□□□ -0.03
PTPN7-216ENST00000492977 C18orf8Q96DM3 657 aa14.87□□□□□ -0.03
PTPN7-216ENST00000492977 RUNDC3BQ96NL0 473 aa14.87□□□□□ -0.03
PTPN7-216ENST00000492977 CHST12Q9NRB3 414 aa14.87□□□□□ -0.03
PTPN7-216ENST00000492977 TUBGCP4Q9UGJ1 667 aa14.87□□□□□ -0.03
PTPN7-216ENST00000492977 HMGXB4Q9UGU5 601 aa14.87□□□□□ -0.03
PTPN7-216ENST00000492977 SRRDQ9UH36 339 aa14.87□□□□□ -0.03
PTPN7-216ENST00000492977 AMACRQ9UHK6 382 aa14.87□□□□□ -0.03
PTPN7-216ENST00000492977 NR2E1Q9Y466 385 aa14.87□□□□□ -0.03
PTPN7-216ENST00000492977 SCN1AP35498 2009 aa14.87□□□□□ -0.03
PTPN7-216ENST00000492977 FAM187AA6NFU0 413 aa14.86□□□□□ -0.03
PTPN7-216ENST00000492977 PIRO00625 290 aa14.86□□□□□ -0.03
PTPN7-216ENST00000492977 FSCN2O14926 492 aa14.86□□□□□ -0.03
PTPN7-216ENST00000492977 PHF2O75151 1096 aa14.86□□□□□ -0.03
PTPN7-216ENST00000492977 MICAL2O94851 1124 aa14.86□□□□□ -0.03
PTPN7-216ENST00000492977 ASGR1P07306 291 aa14.86□□□□□ -0.03
PTPN7-216ENST00000492977 CCND3P30281 292 aaPredicted RBP14.86□□□□□ -0.03
PTPN7-216ENST00000492977 CARSP49589 748 aaKnown RBP14.86□□□□□ -0.03
PTPN7-216ENST00000492977 DHX34Q14147 1143 aaKnown RBP14.86□□□□□ -0.03
PTPN7-216ENST00000492977 PIGHQ14442 188 aaPredicted RBP14.86□□□□□ -0.03
PTPN7-216ENST00000492977 ZNF268Q14587 947 aaPredicted RBP14.86□□□□□ -0.03
PTPN7-216ENST00000492977 SMC1AQ14683 1233 aaKnown RBP14.86□□□□□ -0.03
PTPN7-216ENST00000492977 PTPN20Q4JDL3 420 aa14.86□□□□□ -0.03
PTPN7-216ENST00000492977 FAM47CQ5HY64 1035 aa14.86□□□□□ -0.03
PTPN7-216ENST00000492977 CCSAPQ6IQ19 270 aaPredicted RBP14.86□□□□□ -0.03
PTPN7-216ENST00000492977 AADACL2Q6P093 401 aa14.86□□□□□ -0.03
PTPN7-216ENST00000492977 DCUN1D2Q6PH85 259 aa14.86□□□□□ -0.03
PTPN7-216ENST00000492977 LCLAT1Q6UWP7 414 aa14.86□□□□□ -0.03
PTPN7-216ENST00000492977 UNC93AQ86WB7 457 aa14.86□□□□□ -0.03
PTPN7-216ENST00000492977 GSPT2Q8IYD1 628 aaKnown RBP14.86□□□□□ -0.03
PTPN7-216ENST00000492977 SMG8Q8ND04 991 aaKnown RBP14.86□□□□□ -0.03
PTPN7-216ENST00000492977 CASKIN2Q8WXE0 1202 aa14.86□□□□□ -0.03
PTPN7-216ENST00000492977 SEC14L1Q92503 715 aa14.86□□□□□ -0.03
PTPN7-216ENST00000492977 ZNF560Q96MR9 790 aa14.86□□□□□ -0.03
PTPN7-216ENST00000492977 SENP6Q9GZR1 1112 aaPredicted RBP14.86□□□□□ -0.03
PTPN7-216ENST00000492977 SNX9Q9Y5X1 595 aa14.86□□□□□ -0.03
PTPN7-216ENST00000492977 SIGLEC16A6NMB1 481 aa14.85□□□□□ -0.03
PTPN7-216ENST00000492977 RPS6KA5O75582 802 aa14.85□□□□□ -0.03
PTPN7-216ENST00000492977 GABRB2P47870 512 aa14.85□□□□□ -0.03
PTPN7-216ENST00000492977 RPL7AP62424 266 aaKnown RBP14.85□□□□□ -0.03
PTPN7-216ENST00000492977 CAP1Q01518 475 aa14.85□□□□□ -0.03
PTPN7-216ENST00000492977 ORC1Q13415 861 aa14.85□□□□□ -0.03
PTPN7-216ENST00000492977 CYP1B1Q16678 543 aa14.85□□□□□ -0.03
PTPN7-216ENST00000492977 GLRA4Q5JXX5 417 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms