RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 ADCY5O95622 1261 aa14.24□□□□□ -0.13
HDAC3-213ENST00000492506 MARCKSP29966 332 aaPredicted RBP14.24□□□□□ -0.13
HDAC3-213ENST00000492506 WEE1P30291 646 aa14.24□□□□□ -0.13
HDAC3-213ENST00000492506 LRPAP1P30533 357 aa14.24□□□□□ -0.13
HDAC3-213ENST00000492506 CCT6AP40227 531 aaKnown RBP14.24□□□□□ -0.13
HDAC3-213ENST00000492506 EPHB3P54753 998 aa14.24□□□□□ -0.13
HDAC3-213ENST00000492506 PLD1Q13393 1074 aa14.24□□□□□ -0.13
HDAC3-213ENST00000492506 ZNF174Q15697 407 aa14.24□□□□□ -0.13
HDAC3-213ENST00000492506 ZBTB6Q15916 424 aa14.24□□□□□ -0.13
HDAC3-213ENST00000492506 HAUS3Q68CZ6 603 aa14.24□□□□□ -0.13
HDAC3-213ENST00000492506 TTC9BQ8N6N2 239 aa14.24□□□□□ -0.13
HDAC3-213ENST00000492506 C4orf32Q8N8J7 132 aa14.24□□□□□ -0.13
HDAC3-213ENST00000492506 CCDC112Q8NEF3 446 aa14.24□□□□□ -0.13
HDAC3-213ENST00000492506 PSMG2Q969U7 264 aa14.24□□□□□ -0.13
HDAC3-213ENST00000492506 ZC3H10Q96K80 434 aaKnown RBP14.24□□□□□ -0.13
HDAC3-213ENST00000492506 TCHPQ9BT92 498 aa14.24□□□□□ -0.13
HDAC3-213ENST00000492506 SMOC1Q9H4F8 434 aa14.24□□□□□ -0.13
HDAC3-213ENST00000492506 SLC27A5Q9Y2P5 690 aa14.24□□□□□ -0.13
HDAC3-213ENST00000492506 ABCA7Q8IZY2 2146 aa14.24□□□□□ -0.13
HDAC3-213ENST00000492506 DMXL2Q8TDJ6 3036 aa14.24□□□□□ -0.13
HDAC3-213ENST00000492506 NBEAQ8NFP9 2946 aa14.24□□□□□ -0.13
HDAC3-213ENST00000492506 DSPP15924 2871 aaKnown RBP14.24□□□□□ -0.13
HDAC3-213ENST00000492506 TCHHQ07283 1943 aa14.23□□□□□ -0.13
HDAC3-213ENST00000492506 HIP1RO75146 1068 aa14.23□□□□□ -0.13
HDAC3-213ENST00000492506 TUBB4AP04350 444 aa14.23□□□□□ -0.13
HDAC3-213ENST00000492506 HARSP12081 509 aaKnown RBP14.23□□□□□ -0.13
HDAC3-213ENST00000492506 TNNT3P45378 269 aaPredicted RBP14.23□□□□□ -0.13
HDAC3-213ENST00000492506 FXR2P51116 673 aaKnown RBP eCLIP14.23□□□□□ -0.13
HDAC3-213ENST00000492506 SPAG1Q07617 926 aa14.23□□□□□ -0.13
HDAC3-213ENST00000492506 ST3GAL1Q11201 340 aa14.23□□□□□ -0.13
HDAC3-213ENST00000492506 ORC2Q13416 577 aaPredicted RBP14.23□□□□□ -0.13
HDAC3-213ENST00000492506 TMEM196Q5HYL7 178 aa14.23□□□□□ -0.13
HDAC3-213ENST00000492506 GPR158Q5T848 1215 aa14.23□□□□□ -0.13
HDAC3-213ENST00000492506 FSTL4Q6MZW2 842 aa14.23□□□□□ -0.13
HDAC3-213ENST00000492506 ATAD1Q8NBU5 361 aa14.23□□□□□ -0.13
HDAC3-213ENST00000492506 NTPCRQ9BSD7 190 aaKnown RBP14.23□□□□□ -0.13
HDAC3-213ENST00000492506 RUSC1Q9BVN2 902 aa14.23□□□□□ -0.13
HDAC3-213ENST00000492506 OXCT2Q9BYC2 517 aaPredicted RBP14.23□□□□□ -0.13
HDAC3-213ENST00000492506 HAPLN2Q9GZV7 340 aa14.23□□□□□ -0.13
HDAC3-213ENST00000492506 ATXN3LQ9H3M9 355 aa14.23□□□□□ -0.13
HDAC3-213ENST00000492506 KMT5AQ9NQR1 393 aa14.23□□□□□ -0.13
HDAC3-213ENST00000492506 DDX19AQ9NUU7 478 aaKnown RBP14.23□□□□□ -0.13
HDAC3-213ENST00000492506 ASB3Q9Y575 518 aa14.23□□□□□ -0.13
HDAC3-213ENST00000492506 PCDHGA5Q9Y5G8 931 aa14.23□□□□□ -0.13
HDAC3-213ENST00000492506 PKD1L2Q7Z442 2459 aa14.22□□□□□ -0.13
HDAC3-213ENST00000492506 THADAQ6YHU6 1953 aa14.22□□□□□ -0.13
HDAC3-213ENST00000492506 PTPRDP23468 1912 aa14.22□□□□□ -0.13
HDAC3-213ENST00000492506 TTC26A0AVF1 554 aa14.22□□□□□ -0.13
HDAC3-213ENST00000492506 MTMR11A4FU01 709 aa14.22□□□□□ -0.13
HDAC3-213ENST00000492506 OTOL1A6NHN0 477 aaPredicted RBP14.22□□□□□ -0.13
HDAC3-213ENST00000492506 OR6C75A6NL08 312 aa14.22□□□□□ -0.13
HDAC3-213ENST00000492506 E9PMD0 336 aa14.22□□□□□ -0.13
HDAC3-213ENST00000492506 TOM1L1O75674 476 aa14.22□□□□□ -0.13
HDAC3-213ENST00000492506 SOAT2O75908 522 aa14.22□□□□□ -0.13
HDAC3-213ENST00000492506 AKAP3O75969 853 aa14.22□□□□□ -0.13
HDAC3-213ENST00000492506 GABRR2P28476 465 aa14.22□□□□□ -0.13
HDAC3-213ENST00000492506 ALDH1A3P47895 512 aa14.22□□□□□ -0.13
HDAC3-213ENST00000492506 TPM4P67936 248 aa14.22□□□□□ -0.13
HDAC3-213ENST00000492506 PLCB2Q00722 1185 aa14.22□□□□□ -0.13
HDAC3-213ENST00000492506 GPS2Q13227 327 aa14.22□□□□□ -0.13
HDAC3-213ENST00000492506 DMP1Q13316 513 aaPredicted RBP14.22□□□□□ -0.13
HDAC3-213ENST00000492506 TRIM29Q14134 588 aa14.22□□□□□ -0.13
HDAC3-213ENST00000492506 ANKRD1Q15327 319 aa14.22□□□□□ -0.13
HDAC3-213ENST00000492506 ITPRIPL2Q3MIP1 535 aa14.22□□□□□ -0.13
HDAC3-213ENST00000492506 HAUS6Q7Z4H7 955 aa14.22□□□□□ -0.13
HDAC3-213ENST00000492506 FAM200AQ8TCP9 573 aa14.22□□□□□ -0.13
HDAC3-213ENST00000492506 BPIFB1Q8TDL5 484 aa14.22□□□□□ -0.13
HDAC3-213ENST00000492506 TMEM209Q96SK2 561 aa14.22□□□□□ -0.13
HDAC3-213ENST00000492506 FAM83CQ9BQN1 747 aa14.22□□□□□ -0.13
HDAC3-213ENST00000492506 IL21Q9HBE4 155 aa14.22□□□□□ -0.13
HDAC3-213ENST00000492506 POLR3BQ9NW08 1133 aaPredicted RBP14.22□□□□□ -0.13
HDAC3-213ENST00000492506 WASF3Q9UPY6 502 aa14.22□□□□□ -0.13
HDAC3-213ENST00000492506 V9GYY5 206 aaPredicted RBP14.22□□□□□ -0.13
HDAC3-213ENST00000492506 FASNP49327 2511 aaKnown RBP14.21□□□□□ -0.13
HDAC3-213ENST00000492506 C1QTNF9BB2RNN3 333 aa14.21□□□□□ -0.13
HDAC3-213ENST00000492506 DPYSL4O14531 572 aa14.21□□□□□ -0.13
HDAC3-213ENST00000492506 SLC16A4O15374 487 aa14.21□□□□□ -0.13
HDAC3-213ENST00000492506 CD2BP2O95400 341 aaKnown RBP14.21□□□□□ -0.13
HDAC3-213ENST00000492506 C1QTNF9P0C862 333 aa14.21□□□□□ -0.13
HDAC3-213ENST00000492506 CXCL8P10145 99 aa14.21□□□□□ -0.13
HDAC3-213ENST00000492506 MPLP40238 635 aa14.21□□□□□ -0.13
HDAC3-213ENST00000492506 GUCY1B3Q02153 619 aa14.21□□□□□ -0.13
HDAC3-213ENST00000492506 MYBPC2Q14324 1141 aa14.21□□□□□ -0.13
HDAC3-213ENST00000492506 DHX8Q14562 1220 aaKnown RBP14.21□□□□□ -0.13
HDAC3-213ENST00000492506 PLK5Q496M5 336 aa14.21□□□□□ -0.13
HDAC3-213ENST00000492506 TCEAL6Q6IPX3 200 aa14.21□□□□□ -0.13
HDAC3-213ENST00000492506 PSAPL1Q6NUJ1 521 aa14.21□□□□□ -0.13
HDAC3-213ENST00000492506 RINT1Q6NUQ1 792 aa14.21□□□□□ -0.13
HDAC3-213ENST00000492506 C1orf186Q6ZWK4 172 aa14.21□□□□□ -0.13
HDAC3-213ENST00000492506 IGSF22Q8N9C0 903 aa14.21□□□□□ -0.13
HDAC3-213ENST00000492506 TCEAL3Q969E4 200 aa14.21□□□□□ -0.13
HDAC3-213ENST00000492506 TMEM121BQ9BXQ6 578 aaPredicted RBP14.21□□□□□ -0.13
HDAC3-213ENST00000492506 SLC46A2Q9BY10 475 aa14.21□□□□□ -0.13
HDAC3-213ENST00000492506 SMG9Q9H0W8 520 aaKnown RBP14.21□□□□□ -0.13
HDAC3-213ENST00000492506 DUSP15Q9H1R2 295 aaPredicted RBP14.21□□□□□ -0.13
HDAC3-213ENST00000492506 RASSF4Q9H2L5 321 aa14.21□□□□□ -0.13
HDAC3-213ENST00000492506 TASP1Q9H6P5 420 aa14.21□□□□□ -0.13
HDAC3-213ENST00000492506 C17orf75Q9HAS0 396 aa14.21□□□□□ -0.13
HDAC3-213ENST00000492506 PLEKHA5Q9HAU0 1116 aa14.21□□□□□ -0.13
HDAC3-213ENST00000492506 HPS4Q9NQG7 708 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms