RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 CLIC2O15247 247 aa19.37■□□□□ 0.69
HMGN1-219ENST00000491183 KRT19P08727 400 aa19.37■□□□□ 0.69
HMGN1-219ENST00000491183 TMEM191BP0C7N4 346 aa19.37■□□□□ 0.69
HMGN1-219ENST00000491183 HAPLN1P10915 354 aaPredicted RBP19.37■□□□□ 0.69
HMGN1-219ENST00000491183 OSTM1Q86WC4 334 aa19.37■□□□□ 0.69
HMGN1-219ENST00000491183 GPIHBP1Q8IV16 184 aa19.37■□□□□ 0.69
HMGN1-219ENST00000491183 RDH13Q8NBN7 331 aa19.37■□□□□ 0.69
HMGN1-219ENST00000491183 SPPL2BQ8TCT7 592 aa19.37■□□□□ 0.69
HMGN1-219ENST00000491183 GIPC2Q8TF65 315 aa19.37■□□□□ 0.69
HMGN1-219ENST00000491183 C2orf15Q8WU43 125 aaKnown RBP19.37■□□□□ 0.69
HMGN1-219ENST00000491183 RSPRY1Q96DX4 576 aa19.37■□□□□ 0.69
HMGN1-219ENST00000491183 SLC39A2Q9NP94 309 aa19.37■□□□□ 0.69
HMGN1-219ENST00000491183 HEBP1Q9NRV9 189 aa19.37■□□□□ 0.69
HMGN1-219ENST00000491183 FAM170BA6NMN3 283 aa19.36■□□□□ 0.69
HMGN1-219ENST00000491183 ACTN4O43707 911 aaKnown RBP19.36■□□□□ 0.69
HMGN1-219ENST00000491183 HUS1O60921 280 aa19.36■□□□□ 0.69
HMGN1-219ENST00000491183 PSMC3P17980 439 aa19.36■□□□□ 0.69
HMGN1-219ENST00000491183 GABRR2P28476 465 aa19.36■□□□□ 0.69
HMGN1-219ENST00000491183 SMARCB1Q12824 385 aa19.36■□□□□ 0.69
HMGN1-219ENST00000491183 SURF1Q15526 300 aa19.36■□□□□ 0.69
HMGN1-219ENST00000491183 TPRG1Q6ZUI0 275 aa19.36■□□□□ 0.69
HMGN1-219ENST00000491183 FRMD5Q7Z6J6 570 aa19.36■□□□□ 0.69
HMGN1-219ENST00000491183 ITIH5Q86UX2 942 aa19.36■□□□□ 0.69
HMGN1-219ENST00000491183 DCP1BQ8IZD4 617 aaKnown RBP19.36■□□□□ 0.69
HMGN1-219ENST00000491183 FAM200AQ8TCP9 573 aa19.36■□□□□ 0.69
HMGN1-219ENST00000491183 DNASE1L2Q92874 299 aa19.36■□□□□ 0.69
HMGN1-219ENST00000491183 ANKRD36BP1Q96IX9 119 aa19.36■□□□□ 0.69
HMGN1-219ENST00000491183 ATXN3LQ9H3M9 355 aa19.36■□□□□ 0.69
HMGN1-219ENST00000491183 BRD9Q9H8M2 597 aa19.36■□□□□ 0.69
HMGN1-219ENST00000491183 IL21Q9HBE4 155 aa19.36■□□□□ 0.69
HMGN1-219ENST00000491183 KIAA1586Q9HCI6 787 aa19.36■□□□□ 0.69
HMGN1-219ENST00000491183 LTB4R2Q9NPC1 389 aa19.36■□□□□ 0.69
HMGN1-219ENST00000491183 DDX43Q9NXZ2 648 aaKnown RBP19.36■□□□□ 0.69
HMGN1-219ENST00000491183 ABI2Q9NYB9 513 aaPredicted RBP19.36■□□□□ 0.69
HMGN1-219ENST00000491183 SNX9Q9Y5X1 595 aa19.36■□□□□ 0.69
HMGN1-219ENST00000491183 UBE4BO95155 1302 aa19.35■□□□□ 0.69
HMGN1-219ENST00000491183 COL4A2P08572 1712 aa19.35■□□□□ 0.69
HMGN1-219ENST00000491183 HEPACAM2A8MVW5 462 aa19.35■□□□□ 0.69
HMGN1-219ENST00000491183 GABRDO14764 452 aa19.35■□□□□ 0.69
HMGN1-219ENST00000491183 KLRC4O43908 158 aa19.35■□□□□ 0.69
HMGN1-219ENST00000491183 GFRA3O60609 400 aa19.35■□□□□ 0.69
HMGN1-219ENST00000491183 SLFN14P0C7P3 912 aa19.35■□□□□ 0.69
HMGN1-219ENST00000491183 ACAT1P24752 427 aaKnown RBP19.35■□□□□ 0.69
HMGN1-219ENST00000491183 GDI1P31150 447 aa19.35■□□□□ 0.69
HMGN1-219ENST00000491183 UBXN2BQ14CS0 331 aa19.35■□□□□ 0.69
HMGN1-219ENST00000491183 DUOXA2Q1HG44 320 aa19.35■□□□□ 0.69
HMGN1-219ENST00000491183 BMT2Q1RMZ1 405 aa19.35■□□□□ 0.69
HMGN1-219ENST00000491183 SOWAHAQ2M3V2 549 aa19.35■□□□□ 0.69
HMGN1-219ENST00000491183 ASCL5Q7RTU5 278 aa19.35■□□□□ 0.69
HMGN1-219ENST00000491183 ARID3BQ8IVW6 561 aaPredicted RBP19.35■□□□□ 0.69
HMGN1-219ENST00000491183 MFSD6LQ8IWD5 586 aa19.35■□□□□ 0.69
HMGN1-219ENST00000491183 TMEM86AQ8N2M4 240 aa19.35■□□□□ 0.69
HMGN1-219ENST00000491183 LEO1Q8WVC0 666 aaPredicted RBP19.35■□□□□ 0.69
HMGN1-219ENST00000491183 PAGE5Q96GU1 130 aa19.35■□□□□ 0.69
HMGN1-219ENST00000491183 PKMYT1Q99640 499 aa19.35■□□□□ 0.69
HMGN1-219ENST00000491183 ACBD6Q9BR61 282 aa19.35■□□□□ 0.69
HMGN1-219ENST00000491183 OSBPL6Q9BZF3 934 aa19.35■□□□□ 0.69
HMGN1-219ENST00000491183 SLITRK6Q9H5Y7 841 aa19.35■□□□□ 0.69
HMGN1-219ENST00000491183 PCDHB5Q9Y5E4 795 aa19.35■□□□□ 0.69
HMGN1-219ENST00000491183 TICRRQ7Z2Z1 1910 aa19.34■□□□□ 0.69
HMGN1-219ENST00000491183 A0A1B0GVL5 298 aa19.34■□□□□ 0.69
HMGN1-219ENST00000491183 HCRTO43612 131 aa19.34■□□□□ 0.69
HMGN1-219ENST00000491183 TARSP26639 723 aaKnown RBP19.34■□□□□ 0.69
HMGN1-219ENST00000491183 GPR15P49685 360 aa19.34■□□□□ 0.69
HMGN1-219ENST00000491183 CYP2J2P51589 502 aa19.34■□□□□ 0.69
HMGN1-219ENST00000491183 SNRPFP62306 86 aaKnown RBP19.34■□□□□ 0.69
HMGN1-219ENST00000491183 TSPY1Q01534 308 aa19.34■□□□□ 0.69
HMGN1-219ENST00000491183 FZD5Q13467 585 aa19.34■□□□□ 0.69
HMGN1-219ENST00000491183 VEPH1Q14D04 833 aa19.34■□□□□ 0.69
HMGN1-219ENST00000491183 SNRNP35Q16560 246 aaKnown RBP19.34■□□□□ 0.69
HMGN1-219ENST00000491183 CCDC142Q17RM4 750 aa19.34■□□□□ 0.69
HMGN1-219ENST00000491183 GPR158Q5T848 1215 aa19.34■□□□□ 0.69
HMGN1-219ENST00000491183 LIMS2Q7Z4I7 341 aa19.34■□□□□ 0.69
HMGN1-219ENST00000491183 WDR49Q8IV35 697 aa19.34■□□□□ 0.69
HMGN1-219ENST00000491183 C1orf210Q8IVY1 113 aa19.34■□□□□ 0.69
HMGN1-219ENST00000491183 CEP57L1Q8IYX8 460 aa19.34■□□□□ 0.69
HMGN1-219ENST00000491183 TOP6BLQ8N6T0 577 aa19.34■□□□□ 0.69
HMGN1-219ENST00000491183 XXYLT1Q8NBI6 393 aa19.34■□□□□ 0.69
HMGN1-219ENST00000491183 DEPDC1BQ8WUY9 529 aa19.34■□□□□ 0.69
HMGN1-219ENST00000491183 IRF7Q92985 503 aa19.34■□□□□ 0.69
HMGN1-219ENST00000491183 HPDLQ96IR7 371 aa19.34■□□□□ 0.69
HMGN1-219ENST00000491183 LRRC3BQ96PB8 259 aa19.34■□□□□ 0.69
HMGN1-219ENST00000491183 PI4K2AQ9BTU6 479 aa19.34■□□□□ 0.69
HMGN1-219ENST00000491183 GZF1Q9H116 711 aaPredicted RBP19.34■□□□□ 0.69
HMGN1-219ENST00000491183 TRPV5Q9NQA5 729 aa19.34■□□□□ 0.69
HMGN1-219ENST00000491183 GTF3C4Q9UKN8 822 aa19.34■□□□□ 0.69
HMGN1-219ENST00000491183 USP34Q70CQ2 3546 aa19.34■□□□□ 0.69
HMGN1-219ENST00000491183 CACNA1IQ9P0X4 2223 aa19.33■□□□□ 0.69
HMGN1-219ENST00000491183 FGF19O95750 216 aa19.33■□□□□ 0.68
HMGN1-219ENST00000491183 CST3P01034 146 aaPredicted RBP19.33■□□□□ 0.68
HMGN1-219ENST00000491183 TNNC2P02585 160 aa19.33■□□□□ 0.68
HMGN1-219ENST00000491183 PFKFB1P16118 471 aa19.33■□□□□ 0.68
HMGN1-219ENST00000491183 HMGA1P17096 107 aaKnown RBP19.33■□□□□ 0.68
HMGN1-219ENST00000491183 CMA1P23946 247 aa19.33■□□□□ 0.68
HMGN1-219ENST00000491183 CYP4F8P98187 520 aa19.33■□□□□ 0.68
HMGN1-219ENST00000491183 PSMD6Q15008 389 aa19.33■□□□□ 0.68
HMGN1-219ENST00000491183 NFE2Q16621 373 aaPredicted RBP19.33■□□□□ 0.68
HMGN1-219ENST00000491183 KNOP1Q1ED39 458 aaKnown RBP19.33■□□□□ 0.68
HMGN1-219ENST00000491183 INTS6LQ5JSJ4 861 aaKnown RBP19.33■□□□□ 0.68
HMGN1-219ENST00000491183 TRAPPC11Q7Z392 1133 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms