RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 ADARB2Q9NS39 739 aaKnown RBP2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 TOPORSQ9NS56 1045 aaPredicted RBP2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 TBCCD1Q9NVR7 557 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 DNAJC28Q9NX36 388 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 CGNQ9P2M7 1197 aaKnown RBP2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 LRIT1Q9P2V4 623 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 MTMR6Q9Y217 621 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 DMTF1Q9Y222 760 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 CNPY2Q9Y2B0 182 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 PPP2R3BQ9Y5P8 575 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 FPGT-TNNI3KV9GXZ4 949 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 HECW2Q9P2P5 1572 aa2.34□□□□□ -2.03
SNRNP40-207ENST00000491106 UTYO14607 1347 aa2.34□□□□□ -2.04
SNRNP40-207ENST00000491106 KDRP35968 1356 aa2.34□□□□□ -2.04
SNRNP40-207ENST00000491106 MAP3K5Q99683 1374 aa2.34□□□□□ -2.04
SNRNP40-207ENST00000491106 SIGLEC1Q9BZZ2 1709 aa2.34□□□□□ -2.04
SNRNP40-207ENST00000491106 AKAP12Q02952 1782 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 CDK12Q9NYV4 1490 aaPredicted RBP2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 CENPVL1A0A0U1RR11 272 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 A0A1W2PR48 441 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 GAGE12BA1L429 117 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 GAGE12HA6NDE8 117 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 DRGXA6NNA5 263 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 BECN2A8MW95 431 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 AHRRA9YTQ3 701 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 DIRC3C9JPN6 131 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 GOLGA6L19H0YKK7 550 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 H3BQV1 296 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 KIAA0391O15091 583 aaKnown RBP2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 CCP110O43303 1012 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 ORC4O43929 436 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 DHX16O60231 1041 aaKnown RBP2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 ZEB2O60315 1214 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 TAF5LO75529 589 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 GPANK1O95872 356 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 SNRPA1P09661 255 aaKnown RBP2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 NBPF7P0C2Y1 421 aaPredicted RBP2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 MTHFD2P13995 350 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 IL2RBP14784 551 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 ZSCAN20P17040 1043 aaPredicted RBP2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 CASTP20810 708 aaKnown RBP2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 NR4A1P22736 598 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 RPS6KB1P23443 525 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 CD38P28907 300 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 HOXC9P31274 260 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 SOX5P35711 763 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 ID4P47928 161 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 ZNF75DP51815 510 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 MANFP55145 182 aaKnown RBP2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 EVCP57679 992 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 GSDMDP57764 484 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 SESN3P58005 492 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 PHC1P78364 1004 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 CBX1P83916 185 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 TMPRSS15P98073 1019 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 EXOSC10Q01780 885 aaKnown RBP2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 NEXNQ0ZGT2 675 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 TEFQ10587 303 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 OS9Q13438 667 aaPredicted RBP2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 TP53BP2Q13625 1128 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 TUBB2AQ13885 445 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 TRIM25Q14258 630 aaKnown RBP2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 ACAP2Q15057 778 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 SEPT7Q16181 437 aaKnown RBP2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 ATP2B3Q16720 1220 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 TPD52L1Q16890 204 aaPredicted RBP2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 BMT2Q1RMZ1 405 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 MCMDC2Q4G0Z9 681 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 C19orf54Q5BKX5 351 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 FAM47AQ5JRC9 791 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 PITRM1Q5JRX3 1037 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 TOR2AQ5JU69 321 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 PRAMEF14Q5SWL7 426 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 CREB3L3Q68CJ9 461 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 CYB5RLQ6IPT4 315 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 NAA16Q6N069 864 aaPredicted RBP2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 SARM1Q6SZW1 724 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 DOK3Q7L591 496 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 RSPH3Q86UC2 560 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 PLA2G4DQ86XP0 818 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 CREBRFQ8IUR6 639 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 UNC5CLQ8IV45 518 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 LILRA3Q8N6C8 439 aaPredicted RBP2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 BEND2Q8NDZ0 799 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 CCDC112Q8NEF3 446 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 GPR156Q8NFN8 814 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 TDRD7Q8NHU6 1098 aaKnown RBP2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 KIF18AQ8NI77 898 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 AUTS2Q8WXX7 1259 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 LENG9Q96B70 501 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 TIGD1Q96MW7 591 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 JAKMIP1Q96N16 626 aaKnown RBP2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 ACAP3Q96P50 834 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 SDF4Q9BRK5 362 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 FDXACB1Q9BRP7 624 aaPredicted RBP2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 MRI1Q9BV20 369 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 TUBB2BQ9BVA1 445 aa2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 LSM14BQ9BX40 385 aaKnown RBP2.33□□□□□ -2.04
SNRNP40-207ENST00000491106 TEX101Q9BY14 249 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms