RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 CDH9Q9ULB4 789 aa19.86■□□□□ 0.77
MCF2L-230ENST00000491028 SSX2IPQ9Y2D8 614 aa19.86■□□□□ 0.77
MCF2L-230ENST00000491028 OR6C75A6NL08 312 aa19.85■□□□□ 0.77
MCF2L-230ENST00000491028 URODP06132 367 aa19.85■□□□□ 0.77
MCF2L-230ENST00000491028 PNMA6AP0CW24 399 aaPredicted RBP19.85■□□□□ 0.77
MCF2L-230ENST00000491028 RAD23BP54727 409 aa19.85■□□□□ 0.77
MCF2L-230ENST00000491028 ADKP55263 362 aaKnown RBP19.85■□□□□ 0.77
MCF2L-230ENST00000491028 CREMQ03060 361 aa19.85■□□□□ 0.77
MCF2L-230ENST00000491028 PTK2Q05397 1052 aa19.85■□□□□ 0.77
MCF2L-230ENST00000491028 ASIC2Q16515 512 aa19.85■□□□□ 0.77
MCF2L-230ENST00000491028 KIAA1841Q6NSI8 718 aa19.85■□□□□ 0.77
MCF2L-230ENST00000491028 TAS1R1Q7RTX1 841 aa19.85■□□□□ 0.77
MCF2L-230ENST00000491028 VPS52Q8N1B4 723 aa19.85■□□□□ 0.77
MCF2L-230ENST00000491028 CRYBG2Q8N1P7 616 aa19.85■□□□□ 0.77
MCF2L-230ENST00000491028 SLC4A11Q8NBS3 891 aa19.85■□□□□ 0.77
MCF2L-230ENST00000491028 FBXO22Q8NEZ5 403 aa19.85■□□□□ 0.77
MCF2L-230ENST00000491028 TIFAQ96CG3 184 aa19.85■□□□□ 0.77
MCF2L-230ENST00000491028 PANX2Q96RD6 677 aa19.85■□□□□ 0.77
MCF2L-230ENST00000491028 TWNKQ96RR1 684 aa19.85■□□□□ 0.77
MCF2L-230ENST00000491028 RTP3Q9BQQ7 232 aa19.85■□□□□ 0.77
MCF2L-230ENST00000491028 ELOVL4Q9GZR5 314 aa19.85■□□□□ 0.77
MCF2L-230ENST00000491028 ZBP1Q9H171 429 aa19.85■□□□□ 0.77
MCF2L-230ENST00000491028 ZNHIT6Q9NWK9 470 aaKnown RBP19.85■□□□□ 0.77
MCF2L-230ENST00000491028 KIAA1257Q9ULG3 409 aa19.85■□□□□ 0.77
MCF2L-230ENST00000491028 NME7Q9Y5B8 376 aa19.85■□□□□ 0.77
MCF2L-230ENST00000491028 CYP26A1O43174 497 aa19.84■□□□□ 0.77
MCF2L-230ENST00000491028 CTSAP10619 480 aa19.84■□□□□ 0.77
MCF2L-230ENST00000491028 LMO2P25791 158 aa19.84■□□□□ 0.77
MCF2L-230ENST00000491028 CLCN1P35523 988 aa19.84■□□□□ 0.77
MCF2L-230ENST00000491028 PRKCIP41743 596 aa19.84■□□□□ 0.77
MCF2L-230ENST00000491028 CTXN3Q4LDR2 81 aa19.84■□□□□ 0.77
MCF2L-230ENST00000491028 ZNF394Q53GI3 561 aa19.84■□□□□ 0.77
MCF2L-230ENST00000491028 SPPL3Q8TCT6 385 aa19.84■□□□□ 0.77
MCF2L-230ENST00000491028 RIN2Q8WYP3 895 aaPredicted RBP19.84■□□□□ 0.77
MCF2L-230ENST00000491028 PPP1R9BQ96SB3 815 aa19.84■□□□□ 0.77
MCF2L-230ENST00000491028 SYT15Q9BQS2 421 aa19.84■□□□□ 0.77
MCF2L-230ENST00000491028 MTRRQ9UBK8 725 aa19.84■□□□□ 0.77
MCF2L-230ENST00000491028 MTUS1Q9ULD2 1270 aa19.84■□□□□ 0.77
MCF2L-230ENST00000491028 BACE2Q9Y5Z0 518 aa19.84■□□□□ 0.77
MCF2L-230ENST00000491028 H3BNC9 293 aa19.83■□□□□ 0.77
MCF2L-230ENST00000491028 TBC1D4O60343 1298 aa19.83■□□□□ 0.77
MCF2L-230ENST00000491028 PDGFRBP09619 1106 aa19.83■□□□□ 0.77
MCF2L-230ENST00000491028 VDRP11473 427 aa19.83■□□□□ 0.77
MCF2L-230ENST00000491028 GNA15P30679 374 aa19.83■□□□□ 0.77
MCF2L-230ENST00000491028 PDE6CP51160 858 aa19.83■□□□□ 0.77
MCF2L-230ENST00000491028 TSPY1Q01534 308 aa19.83■□□□□ 0.77
MCF2L-230ENST00000491028 GOLGA8FQ08AF8 430 aa19.83■□□□□ 0.77
MCF2L-230ENST00000491028 GOLGA8DPQ0D2H9 430 aa19.83■□□□□ 0.77
MCF2L-230ENST00000491028 BMS1Q14692 1282 aaKnown RBP19.83■□□□□ 0.77
MCF2L-230ENST00000491028 PSMD5Q16401 504 aa19.83■□□□□ 0.77
MCF2L-230ENST00000491028 MEA1Q16626 185 aa19.83■□□□□ 0.77
MCF2L-230ENST00000491028 INTS6LQ5JSJ4 861 aaKnown RBP19.83■□□□□ 0.77
MCF2L-230ENST00000491028 KIAA0319Q5VV43 1072 aa19.83■□□□□ 0.77
MCF2L-230ENST00000491028 E4F1Q66K89 784 aaPredicted RBP19.83■□□□□ 0.77
MCF2L-230ENST00000491028 IRF2BP2Q7Z5L9 587 aa19.83■□□□□ 0.77
MCF2L-230ENST00000491028 SPRED2Q7Z698 418 aa19.83■□□□□ 0.77
MCF2L-230ENST00000491028 B3GALNT2Q8NCR0 500 aa19.83■□□□□ 0.77
MCF2L-230ENST00000491028 LNX1Q8TBB1 728 aaPredicted RBP19.83■□□□□ 0.77
MCF2L-230ENST00000491028 POF1BQ8WVV4 589 aa19.83■□□□□ 0.77
MCF2L-230ENST00000491028 B3GALT6Q96L58 329 aa19.83■□□□□ 0.77
MCF2L-230ENST00000491028 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.83■□□□□ 0.77
MCF2L-230ENST00000491028 MRPL17Q9NRX2 175 aaKnown RBP19.83■□□□□ 0.77
MCF2L-230ENST00000491028 COLQQ9Y215 455 aaPredicted RBP19.83■□□□□ 0.77
MCF2L-230ENST00000491028 BZW2Q9Y6E2 419 aaKnown RBP19.83■□□□□ 0.77
MCF2L-230ENST00000491028 COL4A4P53420 1690 aaPredicted RBP19.82■□□□□ 0.76
MCF2L-230ENST00000491028 SERPING1P05155 500 aa19.82■□□□□ 0.76
MCF2L-230ENST00000491028 CYP11B1P15538 503 aa19.82■□□□□ 0.76
MCF2L-230ENST00000491028 ACAT1P24752 427 aaKnown RBP19.82■□□□□ 0.76
MCF2L-230ENST00000491028 CDK17Q00537 523 aa19.82■□□□□ 0.76
MCF2L-230ENST00000491028 ARID5AQ03989 594 aa19.82■□□□□ 0.76
MCF2L-230ENST00000491028 KLHL30Q0D2K2 578 aa19.82■□□□□ 0.76
MCF2L-230ENST00000491028 GPM6BQ13491 265 aa19.82■□□□□ 0.76
MCF2L-230ENST00000491028 STILQ15468 1287 aa19.82■□□□□ 0.76
MCF2L-230ENST00000491028 MAPRE1Q15691 268 aaKnown RBP19.82■□□□□ 0.76
MCF2L-230ENST00000491028 HABP4Q5JVS0 413 aaKnown RBP19.82■□□□□ 0.76
MCF2L-230ENST00000491028 CCDC186Q7Z3E2 898 aa19.82■□□□□ 0.76
MCF2L-230ENST00000491028 ACOT1Q86TX2 421 aa19.82■□□□□ 0.76
MCF2L-230ENST00000491028 ZNF677Q86XU0 584 aa19.82■□□□□ 0.76
MCF2L-230ENST00000491028 DCP1BQ8IZD4 617 aaKnown RBP19.82■□□□□ 0.76
MCF2L-230ENST00000491028 OR10T2Q8NGX3 314 aa19.82■□□□□ 0.76
MCF2L-230ENST00000491028 EPS8L1Q8TE68 723 aa19.82■□□□□ 0.76
MCF2L-230ENST00000491028 LMAN2LQ9H0V9 348 aa19.82■□□□□ 0.76
MCF2L-230ENST00000491028 DPEP3Q9H4B8 488 aa19.82■□□□□ 0.76
MCF2L-230ENST00000491028 ALG13Q9NP73 1137 aaKnown RBP19.82■□□□□ 0.76
MCF2L-230ENST00000491028 TLR9Q9NR96 1032 aa19.82■□□□□ 0.76
MCF2L-230ENST00000491028 TMEM265A0A087WTH1 108 aa19.81■□□□□ 0.76
MCF2L-230ENST00000491028 MED7O43513 233 aa19.81■□□□□ 0.76
MCF2L-230ENST00000491028 HCRTO43612 131 aa19.81■□□□□ 0.76
MCF2L-230ENST00000491028 CD19P15391 556 aa19.81■□□□□ 0.76
MCF2L-230ENST00000491028 PTPN1P18031 435 aaKnown RBP19.81■□□□□ 0.76
MCF2L-230ENST00000491028 FECHP22830 423 aa19.81■□□□□ 0.76
MCF2L-230ENST00000491028 ORC1Q13415 861 aa19.81■□□□□ 0.76
MCF2L-230ENST00000491028 PTPN14Q15678 1187 aa19.81■□□□□ 0.76
MCF2L-230ENST00000491028 SGO2Q562F6 1265 aa19.81■□□□□ 0.76
MCF2L-230ENST00000491028 SLC8B1Q6J4K2 584 aa19.81■□□□□ 0.76
MCF2L-230ENST00000491028 PDE12Q6L8Q7 609 aaKnown RBP19.81■□□□□ 0.76
MCF2L-230ENST00000491028 PRSS55Q6UWB4 352 aaPredicted RBP19.81■□□□□ 0.76
MCF2L-230ENST00000491028 TMC7Q7Z402 723 aa19.81■□□□□ 0.76
MCF2L-230ENST00000491028 SLC47A2Q86VL8 602 aa19.81■□□□□ 0.76
MCF2L-230ENST00000491028 HEXIM2Q96MH2 286 aaKnown RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms