RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 GTF2H1P32780 548 aa13.45□□□□□ -0.26
SHOX2-205ENST00000490689 SREBF1P36956 1147 aa13.45□□□□□ -0.26
SHOX2-205ENST00000490689 OTUD4Q01804 1114 aaKnown RBP13.45□□□□□ -0.26
SHOX2-205ENST00000490689 ZCCHC23Q6ZST2 131 aa13.45□□□□□ -0.26
SHOX2-205ENST00000490689 MFN1Q8IWA4 741 aa13.45□□□□□ -0.26
SHOX2-205ENST00000490689 CDAN1Q8IWY9 1227 aa13.45□□□□□ -0.26
SHOX2-205ENST00000490689 CNBD2Q96M20 576 aa13.45□□□□□ -0.26
SHOX2-205ENST00000490689 FOXP3Q9BZS1 431 aa13.45□□□□□ -0.26
SHOX2-205ENST00000490689 DDX4Q9NQI0 724 aaKnown RBP13.45□□□□□ -0.26
SHOX2-205ENST00000490689 HESX1Q9UBX0 185 aa13.45□□□□□ -0.26
SHOX2-205ENST00000490689 FAM237BA0A1B0GVD1 139 aa13.45□□□□□ -0.26
SHOX2-205ENST00000490689 SEC24DO94855 1032 aaPredicted RBP13.45□□□□□ -0.26
SHOX2-205ENST00000490689 SPATA31C1P0DKV0 1188 aa13.45□□□□□ -0.26
SHOX2-205ENST00000490689 PSMC5P62195 406 aa13.45□□□□□ -0.26
SHOX2-205ENST00000490689 ROR2Q01974 943 aaKnown RBP13.45□□□□□ -0.26
SHOX2-205ENST00000490689 ZBTB8OSQ8IWT0 167 aa13.45□□□□□ -0.26
SHOX2-205ENST00000490689 PPIL6Q8IXY8 311 aa13.45□□□□□ -0.26
SHOX2-205ENST00000490689 CCNYL1Q8N7R7 359 aa13.45□□□□□ -0.26
SHOX2-205ENST00000490689 STARD13Q9Y3M8 1113 aa13.45□□□□□ -0.26
SHOX2-205ENST00000490689 AHCYL1O43865 530 aa13.44□□□□□ -0.26
SHOX2-205ENST00000490689 FOXN2P32314 431 aa13.44□□□□□ -0.26
SHOX2-205ENST00000490689 ORC1Q13415 861 aa13.44□□□□□ -0.26
SHOX2-205ENST00000490689 MCOLN2Q8IZK6 566 aa13.44□□□□□ -0.26
SHOX2-205ENST00000490689 PDZD8Q8NEN9 1154 aa13.44□□□□□ -0.26
SHOX2-205ENST00000490689 INPP5DQ92835 1189 aa13.44□□□□□ -0.26
SHOX2-205ENST00000490689 POLR3FQ9H1D9 316 aaPredicted RBP13.44□□□□□ -0.26
SHOX2-205ENST00000490689 PACSIN3Q9UKS6 424 aa13.44□□□□□ -0.26
SHOX2-205ENST00000490689 ZMYND8Q9ULU4 1186 aaPredicted RBP13.44□□□□□ -0.26
SHOX2-205ENST00000490689 MYH13Q9UKX3 1938 aa13.44□□□□□ -0.26
SHOX2-205ENST00000490689 NCANO14594 1321 aa13.44□□□□□ -0.26
SHOX2-205ENST00000490689 PPP1R11O60927 126 aaPredicted RBP13.44□□□□□ -0.26
SHOX2-205ENST00000490689 SNRPAP09012 282 aaKnown RBP13.44□□□□□ -0.26
SHOX2-205ENST00000490689 TFDP2Q14188 446 aa13.44□□□□□ -0.26
SHOX2-205ENST00000490689 ZNF699Q32M78 642 aa13.44□□□□□ -0.26
SHOX2-205ENST00000490689 KHDC1Q4VXA5 237 aaKnown RBP13.44□□□□□ -0.26
SHOX2-205ENST00000490689 EFCAB3Q8N7B9 438 aa13.44□□□□□ -0.26
SHOX2-205ENST00000490689 ETNPPLQ8TBG4 499 aa13.44□□□□□ -0.26
SHOX2-205ENST00000490689 UCMAQ8WVF2 138 aa13.44□□□□□ -0.26
SHOX2-205ENST00000490689 MYH15Q9Y2K3 1946 aa13.44□□□□□ -0.26
SHOX2-205ENST00000490689 RGPD8O14715 1765 aaPredicted RBP13.44□□□□□ -0.26
SHOX2-205ENST00000490689 CRCPO75575 148 aa13.44□□□□□ -0.26
SHOX2-205ENST00000490689 PHEXP78562 749 aa13.44□□□□□ -0.26
SHOX2-205ENST00000490689 PTK6Q13882 451 aa13.44□□□□□ -0.26
SHOX2-205ENST00000490689 SLC1A5Q15758 541 aa13.44□□□□□ -0.26
SHOX2-205ENST00000490689 ANKRD20A4Q4UJ75 823 aa13.44□□□□□ -0.26
SHOX2-205ENST00000490689 GPAT2Q6NUI2 795 aa13.44□□□□□ -0.26
SHOX2-205ENST00000490689 TRIM72Q6ZMU5 477 aa13.44□□□□□ -0.26
SHOX2-205ENST00000490689 ZNF483Q8TF39 744 aaPredicted RBP13.44□□□□□ -0.26
SHOX2-205ENST00000490689 NLRP4Q96MN2 994 aa13.44□□□□□ -0.26
SHOX2-205ENST00000490689 ARL8BQ9NVJ2 186 aa13.44□□□□□ -0.26
SHOX2-205ENST00000490689 CLIC5Q9NZA1 410 aa13.44□□□□□ -0.26
SHOX2-205ENST00000490689 TLK1Q9UKI8 766 aa13.44□□□□□ -0.26
SHOX2-205ENST00000490689 ZHX2Q9Y6X8 837 aa13.44□□□□□ -0.26
SHOX2-205ENST00000490689 TCHHL1Q5QJ38 904 aaPredicted RBP13.43□□□□□ -0.26
SHOX2-205ENST00000490689 LCA5Q86VQ0 697 aa13.43□□□□□ -0.26
SHOX2-205ENST00000490689 CCNJLQ8IV13 435 aa13.43□□□□□ -0.26
SHOX2-205ENST00000490689 EBF2Q9HAK2 575 aa13.43□□□□□ -0.26
SHOX2-205ENST00000490689 KCNMB3Q9NPA1 279 aa13.43□□□□□ -0.26
SHOX2-205ENST00000490689 P4HA2O15460 535 aa13.43□□□□□ -0.26
SHOX2-205ENST00000490689 PGM3O95394 542 aa13.43□□□□□ -0.26
SHOX2-205ENST00000490689 ECHS1P30084 290 aa13.43□□□□□ -0.26
SHOX2-205ENST00000490689 PTGIRP43119 386 aa13.43□□□□□ -0.26
SHOX2-205ENST00000490689 MARSP56192 900 aaKnown RBP13.43□□□□□ -0.26
SHOX2-205ENST00000490689 NCOA4Q13772 614 aa13.43□□□□□ -0.26
SHOX2-205ENST00000490689 CLEC16AQ2KHT3 1053 aa13.43□□□□□ -0.26
SHOX2-205ENST00000490689 SLC45A4Q5BKX6 768 aa13.43□□□□□ -0.26
SHOX2-205ENST00000490689 RARS2Q5T160 578 aaKnown RBP13.43□□□□□ -0.26
SHOX2-205ENST00000490689 SLFN11Q7Z7L1 901 aa13.43□□□□□ -0.26
SHOX2-205ENST00000490689 EMC1Q8N766 993 aa13.43□□□□□ -0.26
SHOX2-205ENST00000490689 AGBL1Q96MI9 1066 aa13.43□□□□□ -0.26
SHOX2-205ENST00000490689 DNAI2Q9GZS0 605 aa13.43□□□□□ -0.26
SHOX2-205ENST00000490689 SLC5A4Q9NY91 659 aa13.43□□□□□ -0.26
SHOX2-205ENST00000490689 NYAP2Q9P242 653 aa13.43□□□□□ -0.26
SHOX2-205ENST00000490689 CHKBQ9Y259 395 aa13.43□□□□□ -0.26
SHOX2-205ENST00000490689 H0YIN7 160 aa13.43□□□□□ -0.26
SHOX2-205ENST00000490689 DNALI1O14645 258 aaPredicted RBP13.43□□□□□ -0.26
SHOX2-205ENST00000490689 USP1O94782 785 aa13.43□□□□□ -0.26
SHOX2-205ENST00000490689 FASTKD3Q14CZ7 662 aaKnown RBP13.43□□□□□ -0.26
SHOX2-205ENST00000490689 FAM182AQ5T1J6 154 aa13.43□□□□□ -0.26
SHOX2-205ENST00000490689 UBAP2Q5T6F2 1119 aaKnown RBP13.43□□□□□ -0.26
SHOX2-205ENST00000490689 VSTM1Q6UX27 236 aa13.43□□□□□ -0.26
SHOX2-205ENST00000490689 RNF148Q8N7C7 305 aa13.43□□□□□ -0.26
SHOX2-205ENST00000490689 ACER1Q8TDN7 264 aa13.43□□□□□ -0.26
SHOX2-205ENST00000490689 OXNAD1Q96HP4 312 aaPredicted RBP13.43□□□□□ -0.26
SHOX2-205ENST00000490689 ANKRD36BP1Q96IX9 119 aa13.43□□□□□ -0.26
SHOX2-205ENST00000490689 ANKRD27Q96NW4 1050 aa13.43□□□□□ -0.26
SHOX2-205ENST00000490689 LRRC19Q9H756 370 aa13.43□□□□□ -0.26
SHOX2-205ENST00000490689 ARHGEF3Q9NR81 526 aa13.43□□□□□ -0.26
SHOX2-205ENST00000490689 DDX56Q9NY93 547 aaKnown RBP13.43□□□□□ -0.26
SHOX2-205ENST00000490689 APPL1Q9UKG1 709 aa13.43□□□□□ -0.26
SHOX2-205ENST00000490689 TBX20Q9UMR3 447 aa13.43□□□□□ -0.26
SHOX2-205ENST00000490689 IVNS1ABPQ9Y6Y0 642 aa13.43□□□□□ -0.26
SHOX2-205ENST00000490689 FMN2Q9NZ56 1722 aa13.43□□□□□ -0.26
SHOX2-205ENST00000490689 ARHGAP10A1A4S6 786 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 OSBPP22059 807 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 SOX11P35716 441 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 PDK4Q16654 411 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 FSCBQ5H9T9 825 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 RFWD3Q6PCD5 774 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 MCPH1Q8NEM0 835 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms