RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 GLUD2P49448 558 aa14.1□□□□□ -0.15
SNX12-205ENST00000490561 RAD23BP54727 409 aa14.1□□□□□ -0.15
SNX12-205ENST00000490561 ERVK-21P61565 698 aa14.1□□□□□ -0.15
SNX12-205ENST00000490561 SMAD3P84022 425 aaKnown RBP14.1□□□□□ -0.15
SNX12-205ENST00000490561 ARID5AQ03989 594 aa14.1□□□□□ -0.15
SNX12-205ENST00000490561 SMARCB1Q12824 385 aa14.1□□□□□ -0.15
SNX12-205ENST00000490561 MRPL58Q14197 206 aaKnown RBP14.1□□□□□ -0.15
SNX12-205ENST00000490561 SGO2Q562F6 1265 aa14.1□□□□□ -0.15
SNX12-205ENST00000490561 VARS2Q5ST30 1063 aaKnown RBP14.1□□□□□ -0.15
SNX12-205ENST00000490561 PPP1R2P3Q6NXS1 205 aa14.1□□□□□ -0.15
SNX12-205ENST00000490561 OSTM1Q86WC4 334 aa14.1□□□□□ -0.15
SNX12-205ENST00000490561 TMEM173Q86WV6 379 aaPredicted RBP14.1□□□□□ -0.15
SNX12-205ENST00000490561 LRRC8AQ8IWT6 810 aa14.1□□□□□ -0.15
SNX12-205ENST00000490561 CCDC170Q8IYT3 715 aa14.1□□□□□ -0.15
SNX12-205ENST00000490561 DCP1BQ8IZD4 617 aaKnown RBP14.1□□□□□ -0.15
SNX12-205ENST00000490561 SLC4A11Q8NBS3 891 aa14.1□□□□□ -0.15
SNX12-205ENST00000490561 WHAMMQ8TF30 809 aa14.1□□□□□ -0.15
SNX12-205ENST00000490561 BCL7CQ8WUZ0 217 aaPredicted RBP14.1□□□□□ -0.15
SNX12-205ENST00000490561 PIK3R5Q8WYR1 880 aa14.1□□□□□ -0.15
SNX12-205ENST00000490561 HEXIM2Q96MH2 286 aaKnown RBP14.1□□□□□ -0.15
SNX12-205ENST00000490561 SYT15Q9BQS2 421 aa14.1□□□□□ -0.15
SNX12-205ENST00000490561 ELOVL4Q9GZR5 314 aa14.1□□□□□ -0.15
SNX12-205ENST00000490561 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.1□□□□□ -0.15
SNX12-205ENST00000490561 CHST7Q9NS84 486 aa14.1□□□□□ -0.15
SNX12-205ENST00000490561 BACE2Q9Y5Z0 518 aa14.1□□□□□ -0.15
SNX12-205ENST00000490561 ATP8B3O60423 1300 aa14.1□□□□□ -0.15
SNX12-205ENST00000490561 GRXCR1A8MXD5 290 aa14.09□□□□□ -0.15
SNX12-205ENST00000490561 CD19P15391 556 aa14.09□□□□□ -0.15
SNX12-205ENST00000490561 DSG1Q02413 1049 aa14.09□□□□□ -0.15
SNX12-205ENST00000490561 MAPK8IP2Q13387 824 aaPredicted RBP14.09□□□□□ -0.15
SNX12-205ENST00000490561 CTXN3Q4LDR2 81 aa14.09□□□□□ -0.15
SNX12-205ENST00000490561 INTS6LQ5JSJ4 861 aaKnown RBP14.09□□□□□ -0.15
SNX12-205ENST00000490561 HGSNATQ68CP4 663 aa14.09□□□□□ -0.15
SNX12-205ENST00000490561 ARHGAP17Q68EM7 881 aa14.09□□□□□ -0.15
SNX12-205ENST00000490561 FAM109BQ6ICB4 259 aaPredicted RBP14.09□□□□□ -0.15
SNX12-205ENST00000490561 WDR59Q6PJI9 974 aa14.09□□□□□ -0.15
SNX12-205ENST00000490561 TRIM72Q6ZMU5 477 aa14.09□□□□□ -0.15
SNX12-205ENST00000490561 CEP57Q86XR8 500 aa14.09□□□□□ -0.15
SNX12-205ENST00000490561 KLHL23Q8NBE8 558 aa14.09□□□□□ -0.15
SNX12-205ENST00000490561 B3GALNT2Q8NCR0 500 aa14.09□□□□□ -0.15
SNX12-205ENST00000490561 EPS8L1Q8TE68 723 aa14.09□□□□□ -0.15
SNX12-205ENST00000490561 PBX4Q9BYU1 374 aa14.09□□□□□ -0.15
SNX12-205ENST00000490561 PRO3102Q9H379 93 aa14.09□□□□□ -0.15
SNX12-205ENST00000490561 DEF6Q9H4E7 631 aa14.09□□□□□ -0.15
SNX12-205ENST00000490561 TIMM13Q9Y5L4 95 aaPredicted RBP14.09□□□□□ -0.15
SNX12-205ENST00000490561 ARHGAP6O43182 974 aa14.08□□□□□ -0.16
SNX12-205ENST00000490561 THAP12O43422 761 aa14.08□□□□□ -0.16
SNX12-205ENST00000490561 PDGFRBP09619 1106 aa14.08□□□□□ -0.16
SNX12-205ENST00000490561 PNMA6AP0CW24 399 aaPredicted RBP14.08□□□□□ -0.16
SNX12-205ENST00000490561 PTPN1P18031 435 aaKnown RBP14.08□□□□□ -0.16
SNX12-205ENST00000490561 LMO2P25791 158 aa14.08□□□□□ -0.16
SNX12-205ENST00000490561 CYLC1P35663 651 aaPredicted RBP14.08□□□□□ -0.16
SNX12-205ENST00000490561 CDR2Q01850 454 aa14.08□□□□□ -0.16
SNX12-205ENST00000490561 GOLGA8FQ08AF8 430 aa14.08□□□□□ -0.16
SNX12-205ENST00000490561 GOLGA8DPQ0D2H9 430 aa14.08□□□□□ -0.16
SNX12-205ENST00000490561 PSMD5Q16401 504 aa14.08□□□□□ -0.16
SNX12-205ENST00000490561 NFE2Q16621 373 aaPredicted RBP14.08□□□□□ -0.16
SNX12-205ENST00000490561 ZNF394Q53GI3 561 aa14.08□□□□□ -0.16
SNX12-205ENST00000490561 HS1BP3Q53T59 392 aa14.08□□□□□ -0.16
SNX12-205ENST00000490561 E4F1Q66K89 784 aaPredicted RBP14.08□□□□□ -0.16
SNX12-205ENST00000490561 PDE12Q6L8Q7 609 aaKnown RBP14.08□□□□□ -0.16
SNX12-205ENST00000490561 CHRDL2Q6WN34 429 aa14.08□□□□□ -0.16
SNX12-205ENST00000490561 C4orf50Q6ZRC1 276 aa14.08□□□□□ -0.16
SNX12-205ENST00000490561 ACOT1Q86TX2 421 aa14.08□□□□□ -0.16
SNX12-205ENST00000490561 SLC47A2Q86VL8 602 aa14.08□□□□□ -0.16
SNX12-205ENST00000490561 VPS52Q8N1B4 723 aa14.08□□□□□ -0.16
SNX12-205ENST00000490561 MYCBPAPQ8TBZ2 947 aa14.08□□□□□ -0.16
SNX12-205ENST00000490561 RIN2Q8WYP3 895 aaPredicted RBP14.08□□□□□ -0.16
SNX12-205ENST00000490561 CCDC42Q96M95 316 aa14.08□□□□□ -0.16
SNX12-205ENST00000490561 TWNKQ96RR1 684 aa14.08□□□□□ -0.16
SNX12-205ENST00000490561 AGPAT1Q99943 283 aa14.08□□□□□ -0.16
SNX12-205ENST00000490561 PDCL3Q9H2J4 239 aa14.08□□□□□ -0.16
SNX12-205ENST00000490561 HAUS4Q9H6D7 363 aa14.08□□□□□ -0.16
SNX12-205ENST00000490561 MRPL17Q9NRX2 175 aaKnown RBP14.08□□□□□ -0.16
SNX12-205ENST00000490561 MTRRQ9UBK8 725 aa14.08□□□□□ -0.16
SNX12-205ENST00000490561 HMGXB4Q9UGU5 601 aa14.08□□□□□ -0.16
SNX12-205ENST00000490561 PCDHGC3Q9UN70 934 aa14.08□□□□□ -0.16
SNX12-205ENST00000490561 YBX2Q9Y2T7 364 aaKnown RBP14.08□□□□□ -0.16
SNX12-205ENST00000490561 CEP83Q9Y592 693 aa14.08□□□□□ -0.16
SNX12-205ENST00000490561 TSC2P49815 1807 aa14.08□□□□□ -0.16
SNX12-205ENST00000490561 KIAA1671Q9BY89 1806 aa14.08□□□□□ -0.16
SNX12-205ENST00000490561 LPXNO60711 386 aa14.07□□□□□ -0.16
SNX12-205ENST00000490561 IPO7O95373 1038 aaKnown RBP14.07□□□□□ -0.16
SNX12-205ENST00000490561 LSM8O95777 96 aaKnown RBP14.07□□□□□ -0.16
SNX12-205ENST00000490561 CTSAP10619 480 aa14.07□□□□□ -0.16
SNX12-205ENST00000490561 TNFAIP3P21580 790 aa14.07□□□□□ -0.16
SNX12-205ENST00000490561 SLC8A3P57103 927 aa14.07□□□□□ -0.16
SNX12-205ENST00000490561 TAP1Q03518 808 aa14.07□□□□□ -0.16
SNX12-205ENST00000490561 CNGA2Q16280 664 aa14.07□□□□□ -0.16
SNX12-205ENST00000490561 RTP2Q5QGT7 225 aa14.07□□□□□ -0.16
SNX12-205ENST00000490561 PPP2R2DQ66LE6 453 aa14.07□□□□□ -0.16
SNX12-205ENST00000490561 NOP9Q86U38 636 aaKnown RBP14.07□□□□□ -0.16
SNX12-205ENST00000490561 FBXO22Q8NEZ5 403 aa14.07□□□□□ -0.16
SNX12-205ENST00000490561 C2orf15Q8WU43 125 aaKnown RBP14.07□□□□□ -0.16
SNX12-205ENST00000490561 ZNF606Q8WXB4 792 aa14.07□□□□□ -0.16
SNX12-205ENST00000490561 RTP3Q9BQQ7 232 aa14.07□□□□□ -0.16
SNX12-205ENST00000490561 C17orf80Q9BSJ5 609 aa14.07□□□□□ -0.16
SNX12-205ENST00000490561 VN1R3Q9BXE9 311 aa14.07□□□□□ -0.16
SNX12-205ENST00000490561 ZCWPW1Q9H0M4 648 aa14.07□□□□□ -0.16
SNX12-205ENST00000490561 LMAN2LQ9H0V9 348 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms