RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 SPATA31D3P0C874 917 aa16.8■□□□□ 0.28
PCCB-218ENST00000490504 TERF1P54274 439 aa16.8■□□□□ 0.28
PCCB-218ENST00000490504 DLG4P78352 724 aa16.8■□□□□ 0.28
PCCB-218ENST00000490504 SOX4Q06945 474 aaPredicted RBP16.8■□□□□ 0.28
PCCB-218ENST00000490504 CETN1Q12798 172 aa16.8■□□□□ 0.28
PCCB-218ENST00000490504 RAPGEF1Q13905 1077 aa16.8■□□□□ 0.28
PCCB-218ENST00000490504 SEZ6Q53EL9 994 aa16.8■□□□□ 0.28
PCCB-218ENST00000490504 SLFN12LQ6IEE8 588 aa16.8■□□□□ 0.28
PCCB-218ENST00000490504 CD300LGQ6UXG3 332 aa16.8■□□□□ 0.28
PCCB-218ENST00000490504 SPATA31D4Q6ZUB0 917 aa16.8■□□□□ 0.28
PCCB-218ENST00000490504 GPR149Q86SP6 731 aa16.8■□□□□ 0.28
PCCB-218ENST00000490504 USP37Q86T82 979 aa16.8■□□□□ 0.28
PCCB-218ENST00000490504 CEP57Q86XR8 500 aa16.8■□□□□ 0.28
PCCB-218ENST00000490504 GLYCTKQ8IVS8 523 aa16.8■□□□□ 0.28
PCCB-218ENST00000490504 GPR65Q8IYL9 337 aa16.8■□□□□ 0.28
PCCB-218ENST00000490504 TMC2Q8TDI7 906 aa16.8■□□□□ 0.28
PCCB-218ENST00000490504 SNX27Q96L92 541 aa16.8■□□□□ 0.28
PCCB-218ENST00000490504 MFSD14AQ96MC6 490 aa16.8■□□□□ 0.28
PCCB-218ENST00000490504 ACAP3Q96P50 834 aa16.8■□□□□ 0.28
PCCB-218ENST00000490504 HAPLN2Q9GZV7 340 aa16.8■□□□□ 0.28
PCCB-218ENST00000490504 INTS2Q9H0H0 1204 aaKnown RBP16.8■□□□□ 0.28
PCCB-218ENST00000490504 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.8■□□□□ 0.28
PCCB-218ENST00000490504 TOPORSQ9NS56 1045 aaPredicted RBP16.8■□□□□ 0.28
PCCB-218ENST00000490504 AIPL1Q9NZN9 384 aa16.8■□□□□ 0.28
PCCB-218ENST00000490504 ANKFY1Q9P2R3 1169 aa16.8■□□□□ 0.28
PCCB-218ENST00000490504 FHOD1Q9Y613 1164 aa16.8■□□□□ 0.28
PCCB-218ENST00000490504 SSU72P8A0A1W2PR75 194 aa16.79■□□□□ 0.28
PCCB-218ENST00000490504 C2CD4DB7Z1M9 353 aa16.79■□□□□ 0.28
PCCB-218ENST00000490504 PMM2O15305 246 aa16.79■□□□□ 0.28
PCCB-218ENST00000490504 EXTL3O43909 919 aa16.79■□□□□ 0.28
PCCB-218ENST00000490504 SERPING1P05155 500 aa16.79■□□□□ 0.28
PCCB-218ENST00000490504 CLCNKBP51801 687 aa16.79■□□□□ 0.28
PCCB-218ENST00000490504 CYP24A1Q07973 514 aa16.79■□□□□ 0.28
PCCB-218ENST00000490504 MAPK8IP2Q13387 824 aaPredicted RBP16.79■□□□□ 0.28
PCCB-218ENST00000490504 ASIC2Q16515 512 aa16.79■□□□□ 0.28
PCCB-218ENST00000490504 C1orf220Q5T0J3 134 aa16.79■□□□□ 0.28
PCCB-218ENST00000490504 ZPBP2Q6X784 338 aa16.79■□□□□ 0.28
PCCB-218ENST00000490504 SYT10Q6XYQ8 523 aa16.79■□□□□ 0.28
PCCB-218ENST00000490504 PLEKHO2Q8TD55 490 aa16.79■□□□□ 0.28
PCCB-218ENST00000490504 EDAQ92838 391 aa16.79■□□□□ 0.28
PCCB-218ENST00000490504 SPAG5Q96R06 1193 aa16.79■□□□□ 0.28
PCCB-218ENST00000490504 TTPALQ9BTX7 342 aa16.79■□□□□ 0.28
PCCB-218ENST00000490504 FNIP2Q9P278 1114 aa16.79■□□□□ 0.28
PCCB-218ENST00000490504 REXO2Q9Y3B8 237 aaKnown RBP16.79■□□□□ 0.28
PCCB-218ENST00000490504 TGM5O43548 720 aa16.78■□□□□ 0.28
PCCB-218ENST00000490504 B3GAT3O94766 335 aa16.78■□□□□ 0.28
PCCB-218ENST00000490504 PLEKP08567 350 aaPredicted RBP16.78■□□□□ 0.28
PCCB-218ENST00000490504 EIF4A3P38919 411 aaKnown RBP16.78■□□□□ 0.28
PCCB-218ENST00000490504 PPP3CAQ08209 521 aa16.78■□□□□ 0.28
PCCB-218ENST00000490504 UPP1Q16831 310 aa16.78■□□□□ 0.28
PCCB-218ENST00000490504 ARHGAP29Q52LW3 1261 aa16.78■□□□□ 0.28
PCCB-218ENST00000490504 HGSNATQ68CP4 663 aa16.78■□□□□ 0.28
PCCB-218ENST00000490504 LILRA6Q6PI73 481 aa16.78■□□□□ 0.28
PCCB-218ENST00000490504 DCLRE1AQ6PJP8 1040 aa16.78■□□□□ 0.28
PCCB-218ENST00000490504 LNX1Q8TBB1 728 aaPredicted RBP16.78■□□□□ 0.28
PCCB-218ENST00000490504 PARD3BQ8TEW8 1205 aa16.78■□□□□ 0.28
PCCB-218ENST00000490504 DEF6Q9H4E7 631 aa16.78■□□□□ 0.28
PCCB-218ENST00000490504 LZTFL1Q9NQ48 299 aa16.78■□□□□ 0.28
PCCB-218ENST00000490504 AGO2Q9UKV8 859 aaKnown RBP16.78■□□□□ 0.28
PCCB-218ENST00000490504 NR2E1Q9Y466 385 aa16.78■□□□□ 0.28
PCCB-218ENST00000490504 ZNF233A6NK53 670 aa16.78■□□□□ 0.28
PCCB-218ENST00000490504 TMEM189-UBE2V1I3L0A0 370 aa16.78■□□□□ 0.28
PCCB-218ENST00000490504 CLDN3O15551 220 aa16.78■□□□□ 0.28
PCCB-218ENST00000490504 RFPL2O75678 378 aa16.78■□□□□ 0.28
PCCB-218ENST00000490504 KCNE1P15382 129 aa16.78■□□□□ 0.28
PCCB-218ENST00000490504 RFX1P22670 979 aa16.78■□□□□ 0.28
PCCB-218ENST00000490504 GTF2H1P32780 548 aa16.78■□□□□ 0.28
PCCB-218ENST00000490504 GCLMP48507 274 aa16.78■□□□□ 0.28
PCCB-218ENST00000490504 MXI1P50539 228 aa16.78■□□□□ 0.28
PCCB-218ENST00000490504 KIF11P52732 1056 aa16.78■□□□□ 0.28
PCCB-218ENST00000490504 JAM2P57087 298 aa16.78■□□□□ 0.28
PCCB-218ENST00000490504 ZXDAP98168 799 aa16.78■□□□□ 0.28
PCCB-218ENST00000490504 MCL1Q07820 350 aa16.78■□□□□ 0.28
PCCB-218ENST00000490504 SLC10A6Q3KNW5 377 aa16.78■□□□□ 0.28
PCCB-218ENST00000490504 TDRD12Q587J7 1177 aaKnown RBP16.78■□□□□ 0.28
PCCB-218ENST00000490504 IQCEQ6IPM2 695 aa16.78■□□□□ 0.28
PCCB-218ENST00000490504 EHBP1Q8NDI1 1231 aa16.78■□□□□ 0.28
PCCB-218ENST00000490504 C3orf58Q8NDZ4 430 aa16.78■□□□□ 0.28
PCCB-218ENST00000490504 PIK3R5Q8WYR1 880 aa16.78■□□□□ 0.28
PCCB-218ENST00000490504 C18orf25Q96B23 403 aaPredicted RBP16.78■□□□□ 0.28
PCCB-218ENST00000490504 UROC1Q96N76 676 aa16.78■□□□□ 0.28
PCCB-218ENST00000490504 CLSTN3Q9BQT9 956 aa16.78■□□□□ 0.28
PCCB-218ENST00000490504 FAM213AQ9BRX8 229 aa16.78■□□□□ 0.28
PCCB-218ENST00000490504 CNTN3Q9P232 1028 aa16.78■□□□□ 0.28
PCCB-218ENST00000490504 TRIOO75962 3097 aa16.77■□□□□ 0.28
PCCB-218ENST00000490504 CCDC195A0A1B0GUA6 201 aa16.77■□□□□ 0.27
PCCB-218ENST00000490504 LRRIQ3A6PVS8 624 aaPredicted RBP16.77■□□□□ 0.27
PCCB-218ENST00000490504 LCA5LO95447 670 aa16.77■□□□□ 0.27
PCCB-218ENST00000490504 LDHAP00338 332 aaKnown RBP16.77■□□□□ 0.27
PCCB-218ENST00000490504 ELAVL2Q12926 359 aaKnown RBP16.77■□□□□ 0.27
PCCB-218ENST00000490504 SPA17Q15506 151 aa16.77■□□□□ 0.27
PCCB-218ENST00000490504 PSMD5Q16401 504 aa16.77■□□□□ 0.27
PCCB-218ENST00000490504 ZNF662Q6ZS27 426 aa16.77■□□□□ 0.27
PCCB-218ENST00000490504 KIAA1328Q86T90 577 aa16.77■□□□□ 0.27
PCCB-218ENST00000490504 CMASQ8NFW8 434 aaPredicted RBP16.77■□□□□ 0.27
PCCB-218ENST00000490504 SLC38A7Q9NVC3 462 aa16.77■□□□□ 0.27
PCCB-218ENST00000490504 APEX2Q9UBZ4 518 aa16.77■□□□□ 0.27
PCCB-218ENST00000490504 A0A0B4J269 797 aa16.76■□□□□ 0.27
PCCB-218ENST00000490504 A0A0U1RQJ8 604 aa16.76■□□□□ 0.27
PCCB-218ENST00000490504 I3L4J1 428 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms